PMC Links for Nucleotide (Select 26111730) - PMC

Links from Nucleotide

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Select item 1392621.

Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli

R. A. Welch, V. Burland, G. Plunkett, III, P. Redford, P. Roesch, D. Rasko, E. L. Buckles, S.-R. Liou, A. Boutin, J. Hackett, D. Stroud, G. F. Mayhew, D. J. Rose, S. Zhou, D. C. Schwartz, N. T. Perna, H. L. T. Mobley, M. S. Donnenberg, F. R. Blattner

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 17020–17024. Published online 2002 Dec 5. doi: 10.1073/pnas.252529799

PMCID:: PMC139262

Abstract Article PDF–334K

Select item 70694712.

Genomic dynamics of species and mobile genetic elements in a prolonged bla_IMP-4-associated carbapenemase outbreak in an Australian hospital

A Kizny Gordon, H T T Phan, S I Lipworth, E Cheong, T Gottlieb, S George, T E A Peto, A J Mathers, A S Walker, D W Crook, N Stoesser

J Antimicrob Chemother. 2020 Apr; 75(4): 873–882. Published online 2020 Jan 20. doi: 10.1093/jac/dkz526

PMCID:: PMC7069471

Abstract Article PDF–746K

Select item 69482413.

Diversity of Betaproteobacteria revealed by novel primers suggests their role in arsenic cycling

Anirban Chakraborty, Chanchal K. DasGupta, Punyasloke Bhadury

Heliyon. 2020 Jan; 6(1): e03089. Published online 2020 Jan 2. doi: 10.1016/j.heliyon.2019.e03089

PMCID:: PMC6948241

Abstract Article PDF–1.1M

Select item 67754614.

Complex Multilevel Control of Hemolysin Production by Uropathogenic Escherichia coli

Nguyen Thi Khanh Nhu, Minh-Duy Phan, Brian M. Forde, Ambika M. V. Murthy, Kate M. Peters, Christopher J. Day, Jessica Poole, Timothy J. Kidd, Rodney A. Welch, Michael P. Jennings, Glen C. Ulett, Matthew J. Sweet, Scott A. Beatson, Mark A. Schembri

mBio. 2019 Sep-Oct; 10(5): e02248-19. Published online 2019 Oct 1. doi: 10.1128/mBio.02248-19

PMCID:: PMC6775461

Abstract Article PDF–2.3M

Select item 67385825.

Baseline human gut microbiota profile in healthy people and standard reporting template

Charles H. King, Hiral Desai, Allison C. Sylvetsky, Jonathan LoTempio, Shant Ayanyan, Jill Carrie, Keith A. Crandall, Brian C. Fochtman, Lusine Gasparyan, Naila Gulzar, Paul Howell, Najy Issa, Konstantinos Krampis, Lopa Mishra, Hiroki Morizono, Joseph R. Pisegna, Shuyun Rao, Yao Ren, Vahan Simonyan, Krista Smith, Sharanjit VedBrat, Michael D. Yao, Raja Mazumder

PLoS One. 2019; 14(9): e0206484. Published online 2019 Sep 11. doi: 10.1371/journal.pone.0206484

PMCID:: PMC6738582

Abstract Article PDF–2.6M

Select item 67022726.

Activation of the NLRP3 Inflammasome Pathway by Prokineticin 2 in Testicular Macrophages of Uropathogenic Escherichia coli- Induced Orchitis

Ying Li, Yufang Su, Ting Zhou, Zhiyong Hu, Jiajing Wei, Wei Wang, Chunyan Liu, Huiping Zhang, Kai Zhao

Front Immunol. 2019; 10: 1872. Published online 2019 Aug 14. doi: 10.3389/fimmu.2019.01872

PMCID:: PMC6702272

Abstract Article PDF–2.2M

Select item 66827677.

Whole-genome sequence analysis of multidrug-resistant uropathogenic strains of Escherichia coli from Mexico

GL Paniagua-Contreras, E Monroy-Pérez, CE Díaz-Velásquez, A Uribe-García, A Labastida, F Peñaloza-Figueroa, P Domínguez-Trejo, LR García, F Vaca-Paniagua, S Vaca

Infect Drug Resist. 2019; 12: 2363–2377. Published online 2019 Aug 1. doi: 10.2147/IDR.S203661

PMCID:: PMC6682767

Abstract Article PDF–2.0M

Select item 66480148.

Rapid Isolation and Identification of Pneumonia-Associated Pathogens from Sputum Samples Combining an Innovative Sample Preparation Strategy and Array-Based Detection

Susanne Pahlow, Lydia Lehniger, Stefanie Hentschel, Barbara Seise, Sascha D. Braun, Ralf Ehricht, Albrecht Berg, Jürgen Popp, Karina Weber

ACS Omega. 2019 Jun 30; 4(6): 10362–10369. Published online 2019 Jun 14. doi: 10.1021/acsomega.9b00904

PMCID:: PMC6648014

Abstract Article PDF–2.1M

Select item 64213509.

Whole genome sequence analysis of Australian avian pathogenic Escherichia coli that carry the class 1 integrase gene

Max L. Cummins, Cameron J. Reid, Piklu Roy Chowdhury, Rhys N. Bushell, Nicolas Esbert, Kelly A. Tivendale, Amir H. Noormohammadi, Shaiful Islam, Marc S. Marenda, Glenn F. Browning, Philip F. Markham, Steven P. Djordjevic

Microb Genom. 2019 Feb; 5(2): e000250. Published online 2019 Jan 23. doi: 10.1099/mgen.0.000250

PMCID:: PMC6421350

Abstract Article PDF–6.0M

Select item 641713710.

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia

J. J. van Aartsen, C. E. Moore, C. M. Parry, P. Turner, N. Phot, S. Mao, K. Suy, T. Davies, A. Giess, A. E. Sheppard, T. E. A. Peto, N. P. J. Day, D. W. Crook, A. S. Walker, N. Stoesser

BMC Microbiol. 2019; 19: 59. Published online 2019 Mar 12. doi: 10.1186/s12866-019-1431-9

PMCID:: PMC6417137

Abstract Article PDF–1.6M

Select item 636920711.

Development of a Novel Loop-Mediated Isothermal Amplification Method to Detect Guiana Extended-Spectrum (GES) β-Lactamase Genes in Pseudomonas aeruginosa

Chika Takano, Mitsuko Seki, Dong Wook Kim, Humphrey Gardner, Robert E. McLaughlin, Paul E. Kilgore, Kazunari Kumasaka, Satoshi Hayakawa

Front Microbiol. 2019; 10: 25. Published online 2019 Feb 4. doi: 10.3389/fmicb.2019.00025

PMCID:: PMC6369207

Abstract Article PDF–546K

Select item 629997312.

Combining multiple functional annotation tools increases coverage of metabolic annotation

Marc Griesemer, Jeffrey A. Kimbrel, Carol E. Zhou, Ali Navid, Patrik D’haeseleer

BMC Genomics. 2018; 19: 948. Published online 2018 Dec 19. doi: 10.1186/s12864-018-5221-9

PMCID:: PMC6299973

Abstract Article PDF–1.0M

Select item 627991513.

rpoB Targeted Loop-Mediated Isothermal Amplification (LAMP) Assay for Consensus Detection of Mycobacteria Associated With Pulmonary Infections

Simon Grandjean Lapierre, Michel Drancourt

Front Med (Lausanne) 2018; 5: 332. Published online 2018 Nov 28. doi: 10.3389/fmed.2018.00332

PMCID:: PMC6279915

Abstract Article PDF–848K

Select item 625675114.

A Large, Refractory Nosocomial Outbreak of Klebsiella pneumoniae Carbapenemase-Producing Escherichia coli Demonstrates Carbapenemase Gene Outbreaks Involving Sink Sites Require Novel Approaches to Infection Control

V. Decraene, H. T. T. Phan, R. George, D. H. Wyllie, O. Akinremi, Z. Aiken, P. Cleary, A. Dodgson, L. Pankhurst, D. W. Crook, C. Lenney, A. S. Walker, N. Woodford, R. Sebra, F. Fath-Ordoubadi, A. J. Mathers, A. C. Seale, M. Guiver, A. McEwan, V. Watts, W. Welfare, N. Stoesser, J. Cawthorne, the TRACE Investigators’ Group

Antimicrob Agents Chemother. 2018 Dec; 62(12): e01689-18. Prepublished online 2018 Sep 24. Published online 2018 Nov 26. doi: 10.1128/AAC.01689-18

PMCID:: PMC6256751

Abstract Article PDF–3.0M

Select item 617188615.

Features of urinary Escherichia coli isolated from children with complicated and uncomplicated urinary tract infections in Mexico

Víctor M. Luna-Pineda, Sara A. Ochoa, Ariadnna Cruz-Córdova, Vicenta Cázares-Domínguez, Juan P. Reyes-Grajeda, Marco A. Flores-Oropeza, José Arellano-Galindo, Rigoberto Castro-Hernández, Marcos Flores-Encarnación, Adriana Ramírez-Vargas, Héctor J. Flores-García, Leticia Moreno-Fierros, Juan Xicohtencatl-Cortes

PLoS One. 2018; 13(10): e0204934. Published online 2018 Oct 4. doi: 10.1371/journal.pone.0204934