PMC Links for Nucleotide (Select 1519313069) - PMC

Select item 67426461.

Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations

Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu

Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3

PMCID:: PMC6742646

Abstract Article PDF–1.2M

Select item 55316112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 54180443.

RNF11 sequestration of the E3 ligase SMURF2 on membranes antagonizes SMAD7 down-regulation of transforming growth factor β signaling

Ryan J. Malonis, Wenxiang Fu, Mark J. Jelcic, Marae Thompson, Brian S. Canter, Mary Tsikitis, Francisco J. Esteva, Irma Sánchez

J Biol Chem. 2017 May 5; 292(18): 7435–7451. Published online 2017 Mar 14. doi: 10.1074/jbc.M117.783662

PMCID:: PMC5418044

Abstract Article PDF–2.7M

Select item 51199344.

The endosomal transcriptional regulator RNF11 integrates degradation and transport of EGFR

Sandra Scharaw, Murat Iskar, Alessandro Ori, Gaelle Boncompain, Vibor Laketa, Ina Poser, Emma Lundberg, Franck Perez, Martin Beck, Peer Bork, Rainer Pepperkok

J Cell Biol. 2016 Nov 21; 215(4): 543–558. doi: 10.1083/jcb.201601090

PMCID:: PMC5119934

Abstract Article PDF–3.6M

Select item 23943405.

The RING-H2 protein RNF11 is overexpressed in breast cancer and is a target of Smurf2 E3 ligase

V Subramaniam, H Li, M Wong, R Kitching, L Attisano, J Wrana, J Zubovits, A M Burger, A Seth

Br J Cancer. 2003 Oct 20; 89(8): 1538–1544. Published online 2003 Oct 14. doi: 10.1038/sj.bjc.6601301

PMCID:: PMC2394340

Abstract Article PDF–205K

Select item 18506896.

Characterization of Gene Expression Induced by RET with MEN2A or MEN2B Mutation

Tsuyoshi Watanabe, Masatoshi Ichihara, Mizuo Hashimoto, Keiko Shimono, Yoshie Shimoyama, Tetsuro Nagasaka, Yoshiki Murakumo, Hideki Murakami, Hideshi Sugiura, Hisashi Iwata, Naoki Ishiguro, Masahide Takahashi

Am J Pathol. 2002 Jul; 161(1): 249–256. doi: 10.1016/S0002-9440(10)64176-4

PMCID:: PMC1850689

Abstract Article PDF–475K

Select item 12213947.

Identification of multiple proteins expressed in murine embryos as binding partners for the WW domains of the ubiquitin-protein ligase Nedd4.

C N Jolliffe, K F Harvey, B P Haines, G Parasivam, S Kumar

Biochem J. 2000 Nov 1; 351(Pt 3): 557–565.

PMCID:: PMC1221394

Summary PDF–317K

Select item 46064718.

Interpreting de novo variation in human disease using denovolyzeR

James S. Ware, Kaitlin E. Samocha, Jason Homsy, Mark J. Daly

Curr Protoc Hum Genet. Author manuscript; available in PMC 2016 Oct 6.

Published in final edited form as: Curr Protoc Hum Genet. 2015; 87: 7.25.1–7.25.15. Published online 2015 Oct 6. doi: 10.1002/0471142905.hg0725s87

PMCID:: PMC4606471

Abstract Article PDF–154K

Select item 44717819.

Inflammatory features of pancreatic cancer highlighted by monocytes/macrophages and CD4+ T cells with clinical impact

Takuya Komura, Yoshio Sakai, Kenichi Harada, Kazunori Kawaguchi, Hisashi Takabatake, Hirohisa Kitagawa, Takashi Wada, Masao Honda, Tetsuo Ohta, Yasuni Nakanuma, Shuichi Kaneko

Cancer Sci. 2015 Jun; 106(6): 672–686. Published online 2015 May 12. doi: 10.1111/cas.12663

PMCID:: PMC4471781

Abstract Article PDF–1.4M

Select item 357312210.

miR-199a-5p Is Upregulated during Fibrogenic Response to Tissue Injury and Mediates TGFbeta-Induced Lung Fibroblast Activation by Targeting Caveolin-1

Christian Lacks Lino Cardenas, Imène Sarah Henaoui, Elisabeth Courcot, Christoph Roderburg, Christelle Cauffiez, Sébastien Aubert, Marie-Christine Copin, Benoit Wallaert, François Glowacki, Edmone Dewaeles, Jadranka Milosevic, Julien Maurizio, John Tedrow, Brice Marcet, Jean-Marc Lo-Guidice, Naftali Kaminski, Pascal Barbry, Tom Luedde, Michael Perrais, Bernard Mari, Nicolas Pottier

PLoS Genet. 2013 Feb; 9(2): e1003291. Published online 2013 Feb 14. doi: 10.1371/journal.pgen.1003291

PMCID:: PMC3573122

Abstract Article PDF–8.5M

Select item 109055611.

A method for aligning RNA secondary structures and its application to RNA motif detection

Jianghui Liu, Jason TL Wang, Jun Hu, Bin Tian

BMC Bioinformatics. 2005; 6: 89. Published online 2005 Apr 7. doi: 10.1186/1471-2105-6-89

PMCID:: PMC1090556

Abstract Article PDF–1.2M

Select item 40368112.

Systematic Characterization of the Zinc-Finger-Containing Proteins in the Mouse Transcriptome

Timothy Ravasi, Thomas Huber, Mihaela Zavolan, Alistair Forrest, Terry Gaasterland, Sean Grimmond, RIKEN GER Group, GSL Members, David A. Hume

Genome Res. 2003 Jun; 13(6b): 1430–1442. doi: 10.1101/gr.949803

PMCID:: PMC403681

Abstract Article PDF–1.1M

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