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Select item 57909131.

Plasmid Negative Regulation of CPAF Expression Is Pgp4 Independent and Restricted to Invasive Chlamydia trachomatis Biovars

Michael John Patton, Chih-Yu Chen, Chunfu Yang, Stuart McCorrister, Chris Grant, Garrett Westmacott, Xin-Yong Yuan, Estela Ochoa, Robert Fariss, William M. Whitmire, John H. Carlson, Harlan D. Caldwell, Grant McClarty

mBio. 2018 Jan-Feb; 9(1): e02164-17. Published online 2018 Jan 30. doi: 10.1128/mBio.02164-17

PMCID:: PMC5790913

Article PDF–1.3M

Select item 54510822.

Rapid detection and strain typing of Chlamydia trachomatis using a highly multiplexed microfluidic PCR assay

Rosemary S. Turingan, Ludmila Kaplun, Greice Krautz-Peterson, Sarah Norsworthy, Anna Zolotova, Sandeep J. Joseph, Timothy D. Read, Deborah Dean, Eugene Tan, Richard F. Selden

PLoS One. 2017; 12(5): e0178653. Published online 2017 May 31. doi: 10.1371/journal.pone.0178653

PMCID:: PMC5451082

Article PDF–2.7M

Select item 49431823.

Host-Associated Genomic Features of the Novel Uncultured Intracellular Pathogen Ca. Ichthyocystis Revealed by Direct Sequencing of Epitheliocysts

Weihong Qi, Lloyd Vaughan, Pantelis Katharios, Ralph Schlapbach, Helena M.B. Seth-Smith

Genome Biol Evol. 2016 Jun; 8(6): 1672–1689. Published online 2016 May 10. doi: 10.1093/gbe/evw111

PMCID:: PMC4943182

Article PDF–1.0M

Select item 48361664.

Does typing of Chlamydia trachomatis using housekeeping multilocus sequence typing reveal different sexual networks among heterosexuals and men who have sex with men?

Bart Versteeg, Sylvia M. Bruisten, Arie van der Ende, Yvonne Pannekoek

BMC Infect Dis. 2016; 16: 162. Published online 2016 Apr 18. doi: 10.1186/s12879-016-1486-2

PMCID:: PMC4836166

Article PDF–957K

Select item 42143105.

Novel Chlamydia trachomatis Strains in Heterosexual Sex Partners, Indianapolis, Indiana, USA

Byron E. Batteiger, Raymond Wan, James A. Williams, Linda He, Arissa Ma, J. Dennis Fortenberry, Deborah Dean

Emerg Infect Dis. 2014 Nov; 20(11): 1841–1847. doi: 10.3201/2011.140604

PMCID:: PMC4214310

Article PDF–613K

Select item 40740396.

Direct Amplification, Sequencing and Profiling of Chlamydia trachomatis Strains in Single and Mixed Infection Clinical Samples

Sandeep J. Joseph, Ben Li, Tanvi Ghonasgi, Chad P. Haase, Zhaohui S. Qin, Deborah Dean, Timothy D. Read

PLoS One. 2014; 9(6): e99290. Published online 2014 Jun 27. doi: 10.1371/journal.pone.0099290

PMCID:: PMC4074039

Article PDF–1.2M

Select item 39320187.

Genome sequencing and comparative analysis of three Chlamydia pecorum strains associated with different pathogenic outcomes

Michelle Sait, Morag Livingstone, Ewan M Clark, Nick Wheelhouse, Lucy Spalding, Bryan Markey, Simone Magnino, Frederick A Lainson, Garry SA Myers, David Longbottom

BMC Genomics. 2014; 15(1): 23. Published online 2014 Jan 14. doi: 10.1186/1471-2164-15-23

PMCID:: PMC3932018

Article PDF–3.6M

Select item 37032838.

Genomic and phenotypic characterization of in vitro-generated Chlamydia trachomatis recombinants

Brendan M Jeffrey, Robert J Suchland, Steven G Eriksen, Kelsi M Sandoz, Daniel D Rockey

BMC Microbiol. 2013; 13: 142. Published online 2013 Jun 20. doi: 10.1186/1471-2180-13-142

PMCID:: PMC3703283

Article PDF–1.7M

Select item 35418259.

The Swedish new variant of Chlamydia trachomatis: genome sequence, morphology, cell tropism and phenotypic characterization

Magnus Unemo, Helena M. B. Seth-Smith, Lesley T. Cutcliffe, Rachel J. Skilton, David Barlow, David Goulding, Kenneth Persson, Simon R. Harris, Anne Kelly, Carina Bjartling, Hans Fredlund, Per Olcén, Nicholas R. Thomson, Ian N. Clarke

Microbiology (Reading) 2010 May; 156(Pt 5): 1394–1404. doi: 10.1099/mic.0.036830-0

PMCID:: PMC3541825

Article PDF–679K

Select item 349427610.

Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure

Sandeep J. Joseph, Xavier Didelot, James Rothschild, Henry J.C. de Vries, Servaas A. Morré, Timothy D. Read, Deborah Dean

Mol Biol Evol. 2012 Dec; 29(12): 3933–3946. Published online 2012 Aug 13. doi: 10.1093/molbev/mss198

PMCID:: PMC3494276

Article PDF–1.0M

Select item 332365011.

The Chlamydia psittaci Genome: A Comparative Analysis of Intracellular Pathogens

Anja Voigt, Gerhard Schöfl, Hans Peter Saluz

PLoS One. 2012; 7(4): e35097. Published online 2012 Apr 10. doi: 10.1371/journal.pone.0035097

PMCID:: PMC3323650

Article PDF–1.0M

Select item 326406312.

In Vitro Recombinants of Antibiotic-Resistant Chlamydia trachomatis Strains Have Statistically More Breakpoints than Clinical Recombinants for the Same Sequenced Loci and Exhibit Selection at Unexpected Loci

Tara Srinivasan, William J. Bruno, Raymond Wan, Albert Yen, Jennifer Duong, Deborah Dean

J Bacteriol. 2012 Feb; 194(3): 617–626. doi: 10.1128/JB.06268-11

PMCID:: PMC3264063

Article PDF–2.6M

Select item 314773413.

Evaluation of High-Resolution Typing Methods for Chlamydia trachomatis in Samples from Heterosexual Couples

Reinier J. M. Bom, Linus Christerson, Maarten F. Schim van der Loeff, Roel A. Coutinho, Björn Herrmann, Sylvia M. Bruisten

J Clin Microbiol. 2011 Aug; 49(8): 2844–2853. doi: 10.1128/JCM.00128-11

PMCID:: PMC3147734

Article PDF–873K

Select item 312679314.

Interplay of recombination and selection in the genomes of Chlamydia trachomatis

Sandeep J Joseph, Xavier Didelot, Khanjan Gandhi, Deborah Dean, Timothy D Read

Biol Direct. 2011; 6: 28. Published online 2011 May 26. doi: 10.1186/1745-6150-6-28

PMCID:: PMC3126793

Article PDF–1.1M

Select item 308811615.

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L₂) and D Lineages

Naraporn Somboonna, Raymond Wan, David M. Ojcius, Matthew A. Pettengill, Sandeep J. Joseph, Alexander Chang, Ray Hsu, Timothy D. Read, Deborah Dean

mBio. 2011 May-Jun; 2(3): e00045-11. Published online 2011 May 3. doi: 10.1128/mBio.00045-11

PMCID:: PMC3088116

Article PDF–1.9M

Select item 306752216.

Toll-Like Receptor 2 Activation by Chlamydia trachomatis Is Plasmid Dependent, and Plasmid-Responsive Chromosomal Loci Are Coordinately Regulated in Response to Glucose Limitation by C. trachomatis but Not by C. muridarum

Catherine M. O'Connell, Yasser M. AbdelRahman, Erin Green, Hillary K. Darville, Kazima Saira, Bennett Smith, Toni Darville, Amy M. Scurlock, Christopher R. Meyer, Robert J. Belland

Infect Immun. 2011 Mar; 79(3): 1044–1056. Published online 2011 Jan 3. doi: 10.1128/IAI.01118-10

PMCID:: PMC3067522

Article PDF–2.0M

Select item 293744917.

Phylogenetic Analysis of Chlamydia trachomatis Tarp and Correlation with Clinical Phenotype

Erika I. Lutter, Christine Bonner, Martin J. Holland, Robert J. Suchland, Walter E. Stamm, Travis J. Jewett, Grant McClarty, Ted Hackstadt

Infect Immun. 2010 Sep; 78(9): 3678–3688. Published online 2010 Jul 6. doi: 10.1128/IAI.00515-10

PMCID:: PMC2937449

Article PDF–1.8M

Select item 291683418.

sRNAscanner: A Computational Tool for Intergenic Small RNA Detection in Bacterial Genomes

Jayavel Sridhar, Suryanarayanan Ramkumar Narmada, Radhakrishnan Sabarinathan, Hong-Yu Ou, Zixin Deng, Kanagaraj Sekar, Ziauddin Ahamed Rafi, Kumar Rajakumar

PLoS One. 2010; 5(8): e11970. Published online 2010 Aug 5. doi: 10.1371/journal.pone.0011970