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Items: 17

1.
Regulation of Expression and Evolution of Genes in Plastids of Rhodophytic Branch
Oleg Anatolyevich Zverkov, Alexandr Vladislavovich Seliverstov, Vassily Alexandrovich Lyubetsky
Life (Basel) 2016 Mar; 6(1): 7. Published online 2016 Jan 29. doi: 10.3390/life6010007
PMCID:
PMC4810238
ArticlePDF–1.3M
2.
Algorithms for reconstruction of chromosomal structures
Vassily Lyubetsky, Roman Gershgorin, Alexander Seliverstov, Konstantin Gorbunov
BMC Bioinformatics. 2016; 17: 40. Published online 2016 Jan 19. doi: 10.1186/s12859-016-0878-z
PMCID:
PMC4717669
ArticlePDF–1.6M
3.
A Database of Plastid Protein Families from Red Algae and Apicomplexa and Expression Regulation of the moeB Gene
Oleg A. Zverkov, Alexandr V. Seliverstov, Vassily A. Lyubetsky
Biomed Res Int. 2015; 2015: 510598. Published online 2015 May 31. doi: 10.1155/2015/510598
PMCID:
PMC4465662
ArticlePDF–538K
4.
Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae
Heather M Hunsperger, Tejinder Randhawa, Rose Ann Cattolico
BMC Evol Biol. 2015; 15: 16. Published online 2015 Feb 10. doi: 10.1186/s12862-015-0286-4
PMCID:
PMC4337275
ArticlePDF–3.4M
5.
The mitochondrial and chloroplast genomes of the haptophyte Chrysochromulina tobin contain unique repeat structures and gene profiles
Blake T Hovde, Shawn R Starkenburg, Heather M Hunsperger, Laina D Mercer, Chloe R Deodato, Ramesh K Jha, Olga Chertkov, Raymond J Monnat, Jr, Rose Ann Cattolico
BMC Genomics. 2014; 15: 604. Published online 2014 Jul 17. doi: 10.1186/1471-2164-15-604
PMCID:
PMC4226036
ArticlePDF–2.6M
6.
Complete Genes May Pass from Food to Human Blood
Sándor Spisák, Norbert Solymosi, Péter Ittzés, András Bodor, Dániel Kondor, Gábor Vattay, Barbara K. Barták, Ferenc Sipos, Orsolya Galamb, Zsolt Tulassay, Zoltán Szállási, Simon Rasmussen, Thomas Sicheritz-Ponten, Søren Brunak, Béla Molnár, István Csabai
PLoS One. 2013; 8(7): e69805. Published online 2013 Jul 30. doi: 10.1371/journal.pone.0069805
PMCID:
PMC3728338
ArticlePDF–730K
7.
Complete Sequence and Analysis of Plastid Genomes of Two Economically Important Red Algae: Pyropia haitanensis and Pyropia yezoensis
Li Wang, Yunxiang Mao, Fanna Kong, Guiyang Li, Fei Ma, Baolong Zhang, Peipei Sun, Guiqi Bi, Fangfang Zhang, Hongfan Xue, Min Cao
PLoS One. 2013; 8(5): e65902. Published online 2013 May 29. doi: 10.1371/journal.pone.0065902
PMCID:
PMC3667073
ArticlePDF–4.0M
8.
CGAP: a new comprehensive platform for the comparative analysis of chloroplast genomes
Jinkui Cheng, Xu Zeng, Guomin Ren, Zhihua Liu
BMC Bioinformatics. 2013; 14: 95. Published online 2013 Mar 14. doi: 10.1186/1471-2105-14-95
PMCID:
PMC3636126
ArticlePDF–1.6M
9.
Evolution of Red Algal Plastid Genomes: Ancient Architectures, Introns, Horizontal Gene Transfer, and Taxonomic Utility of Plastid Markers
Jan Janouškovec, Shao-Lun Liu, Patrick T. Martone, Wilfrid Carré, Catherine Leblanc, Jonas Collén, Patrick J. Keeling
PLoS One. 2013; 8(3): e59001. Published online 2013 Mar 25. doi: 10.1371/journal.pone.0059001
PMCID:
PMC3607583
ArticlePDF–1.7M
10.
Does the Mode of Plastid Inheritance Influence Plastid Genome Architecture?
Kate Crosby, David Roy Smith
PLoS One. 2012; 7(9): e46260. Published online 2012 Sep 27. doi: 10.1371/journal.pone.0046260
PMCID:
PMC3459873
ArticlePDF–262K
11.
Analysis of Porphyra Membrane Transporters Demonstrates Gene Transfer among Photosynthetic Eukaryotes and Numerous Sodium-Coupled Transport Systems
Cheong Xin Chan, Simone Zäuner, Glen Wheeler, Arthur R. Grossman, Simon E. Prochnik, Nicolas A. Blouin, Yunyun Zhuang, Christoph Benning, Gry Mine Berg, Charles Yarish, Renée L. Eriksen, Anita S. Klein, Senjie Lin, Ira Levine, Susan H. Brawley, Debashish Bhattacharya
Plant Physiol. 2012 Apr; 158(4): 2001–2012. Published online 2012 Feb 14. doi: 10.1104/pp.112.193896
PMCID:
PMC3320202
ArticlePDF–1.0M
12.
Rampant Gene Loss in the Underground Orchid Rhizanthella gardneri Highlights Evolutionary Constraints on Plastid Genomes
Etienne Delannoy, Sota Fujii, Catherine Colas des Francs-Small, Mark Brundrett, Ian Small
Mol Biol Evol. 2011 Jul; 28(7): 2077–2086. Published online 2011 Feb 2. doi: 10.1093/molbev/msr028
PMCID:
PMC3112369
ArticlePDF–1.0M
13.
The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate
Natalie Donaher, Goro Tanifuji, Naoko T. Onodera, Stephanie A. Malfatti, Patrick S. G. Chain, Yoshiaki Hara, John M. Archibald
Genome Biol Evol. 2009; 1: 439–448. Published online 2009 Nov 13. doi: 10.1093/gbe/evp047
PMCID:
PMC2839278
ArticlePDF–440K
14.
Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus
Linda A Raubeson, Rhiannon Peery, Timothy W Chumley, Chris Dziubek, H Matthew Fourcade, Jeffrey L Boore, Robert K Jansen
BMC Genomics. 2007; 8: 174. Published online 2007 Jun 15. doi: 10.1186/1471-2164-8-174
PMCID:
PMC1925096
ArticlePDF–1.4M
15.
A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies
Claude Lemieux, Christian Otis, Monique Turmel
BMC Biol. 2007; 5: 2. Published online 2007 Jan 12. doi: 10.1186/1741-7007-5-2
PMCID:
PMC1781420
ArticlePDF–1.3M
16.
The Chlamydomonas reinhardtii Plastid Chromosome: Islands of Genes in a Sea of Repeats
Jude E. Maul, Jason W. Lilly, Liying Cui, Claude W. dePamphilis, Webb Miller, Elizabeth H. Harris, David B. Stern
Plant Cell. 2002 Nov; 14(11): 2659–2679. doi: 10.1105/tpc.006155
PMCID:
PMC153795
ArticlePDF–854K
17.
The Chlamydomonas reinhardtii Organellar Genomes Respond Transcriptionally and Post-Transcriptionally to Abiotic Stimuli
Jason W. Lilly, Jude E. Maul, David B. Stern
Plant Cell. 2002 Nov; 14(11): 2681–2706. doi: 10.1105/tpc.005595
Retraction in:
Plant Cell. 2004 Mar; 16(3): 785.
PMCID:
PMC152721
Article

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