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Select item 94378481.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 90361182.

The TORC1 phosphoproteome in C. elegans reveals roles in transcription and autophagy

Aileen K. Sewell, Zachary C. Poss, Christopher C. Ebmeier, Jeremy R. Jacobsen, William M. Old, Min Han

iScience. 2022 May 20; 25(5): 104186. Published online 2022 Mar 31. doi: 10.1016/j.isci.2022.104186

PMCID:: PMC9036118

Abstract Article PDF–2.4M

Select item 90207163.

A modified TurboID approach identifies tissue-specific centriolar components in C. elegans

Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann

PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150

Correction in:: PLoS Genet. 2023 Feb; 19(2): e1010645.

PMCID:: PMC9020716

Abstract Article PDF–2.0M

Select item 84467934.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311835.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951766.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 62165907.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 49426128.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Abstract Article PDF–1.2M

Select item 48653189.

The SH3 domain of UNC-89 (obscurin) interacts with paramyosin, a coiled-coil protein, in Caenorhabditis elegans muscle

Hiroshi Qadota, Olga Mayans, Yohei Matsunaga, Jonathan L. McMurry, Kristy J. Wilson, Grace E. Kwon, Rachel Stanford, Kevin Deehan, Tina L. Tinley, Verra M. Ngwa, Guy M. Benian

Mol Biol Cell. 2016 May 15; 27(10): 1606–1620. doi: 10.1091/mbc.E15-09-0675

PMCID:: PMC4865318

Abstract Article PDF–4.5M

Select item 478140410.

Genetic balancers.

Mark L Edgley, David L Baillie, Donald L Riddle, Ann M Rose

WormBook. 2006 : 1–32. Published online 2006 Apr 6. doi: 10.1895/wormbook.1.89.1

PMCID:: PMC4781404

Article

Select item 478100811.

Genetic suppression.

Jonathan Hodgkin

WormBook. 2005 : 1–13. Published online 2005 Dec 27. doi: 10.1895/wormbook.1.59.1

PMCID:: PMC4781008

Abstract Article

Select item 476755912.

A combined binary interaction and phenotypic map of C. elegans cell polarity proteins

Thijs Koorman, Diana Klompstra, Monique van der Voet, Irma Lemmens, João J. Ramalho, Susan Nieuwenhuize, Sander van den Heuvel, Jan Tavernier, Jeremy Nance, Mike Boxem

Nat Cell Biol. Author manuscript; available in PMC 2016 Jul 18.

Published in final edited form as: Nat Cell Biol. 2016 Mar; 18(3): 337–346. Published online 2016 Jan 18. doi: 10.1038/ncb3300

PMCID:: PMC4767559

Abstract Article PDF–1.7M

Select item 464990813.

Somatic expression of unc-54 and vha-6 mRNAs declines but not pan-neuronal rgef-1 and unc-119 expression in aging Caenorhabditis elegans

Frauke Adamla, Zoya Ignatova

Sci Rep. 2015; 5: 10692. Published online 2015 Jun 2. doi: 10.1038/srep10692

PMCID:: PMC4649908

Abstract Article PDF–1009K

Select item 463229914.

A bacterial metabolite induces glutathione-tractable proteostatic damage, proteasomal disturbances, and PINK1-dependent autophagy in C. elegans

B A Martinez, H Kim, A Ray, G A Caldwell, K A Caldwell

Cell Death Dis. 2015 Oct; 6(10): e1908. Published online 2015 Oct 15. doi: 10.1038/cddis.2015.270

PMCID:: PMC4632299

Abstract Article PDF–2.3M

Select item 365827715.

SH3 interactome conserves general function over specific form

Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Ailan Guo, Lianet Lopez, Alevtina Pavlenco, Adenrele Akintobi, Yingnan Zhang, Jean-François Rual, Bridget Currell, Somasekar Seshagiri, Tong Hao, Xinping Yang, Yun A Shen, Kourosh Salehi-Ashtiani, Jingjing Li, Aaron T Cheng, Dryden Bouamalay, Adrien Lugari, David E Hill, Mark L Grimes, David G Drubin, Barth D Grant, Marc Vidal, Charles Boone, Sachdev S Sidhu, Gary D Bader

Mol Syst Biol. 2013; 9: 652. Published online 2013 Apr 2. doi: 10.1038/msb.2013.9