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Items: 1 to 20 of 31

1.
The E3/E4 ubiquitin ligase UFD-2 suppresses normal and oncogenic signaling mediated by a Raf ortholog in Caenorhabditis elegans
Robert Townley, Augustin Deniaud, Kennedy S. Stacy, Claudia S. Rodriguez Torres, Fatemeh Cheraghi, Nicole B. Wicker, Claire C. de la Cova
Sci Signal. Author manuscript; available in PMC 2023 Nov 17.
Published in final edited form as: Sci Signal. 2023 Aug 29; 16(800): eabq4355. Published online 2023 Aug 29. doi: 10.1126/scisignal.abq4355
PMCID:
PMC10656100
AbstractArticlePDF–1.1M
2.
SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans
Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino
Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755
PMCID:
PMC10617626
AbstractArticle
3.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
4.
A modified TurboID approach identifies tissue-specific centriolar components in C. elegans
Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann
PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150
Correction in:
PLoS Genet. 2023 Feb; 19(2): e1010645.
PMCID:
PMC9020716
AbstractArticlePDF–2.0M
5.
Melatonin reduces the endoplasmic reticulum stress and polyubiquitinated protein accumulation induced by repeated anesthesia exposure in Caenorhabditis elegans
Hyun-Jung Shin, Bon-Wook Koo, Jiwon Yoon, Heeyeon Kim, Sang-Hwan Do, Hyo-Seok Na
Sci Rep. 2022; 12: 5783. Published online 2022 Apr 6. doi: 10.1038/s41598-022-09853-y
PMCID:
PMC8986834
AbstractArticlePDF–2.5M
6.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
7.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
8.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
9.
BK channel density is regulated by endoplasmic reticulum associated degradation and influenced by the SKN-1A/NRF1 transcription factor
Timothy P. Cheung, Jun-Yong Choe, Janet E. Richmond, Hongkyun Kim
PLoS Genet. 2020 Jun; 16(6): e1008829. Published online 2020 Jun 5. doi: 10.1371/journal.pgen.1008829
PMCID:
PMC7299407
AbstractArticlePDF–3.7M
10.
The conserved histone chaperone LIN‐53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans
Stefanie Müthel, Bora Uyar, Mei He, Anne Krause, Burcu Vitrinel, Selman Bulut, Djordje Vasiljevic, Iris Marchal, Stefan Kempa, Altuna Akalin, Baris Tursun
Aging Cell. 2019 Dec; 18(6): e13012. Published online 2019 Aug 9. doi: 10.1111/acel.13012
PMCID:
PMC6826145
AbstractArticlePDF–3.0M
11.
iProteinDB: An Integrative Database of Drosophila Post-translational Modifications
Yanhui Hu, Richelle Sopko, Verena Chung, Marianna Foos, Romain A. Studer, Sean D. Landry, Daniel Liu, Leonard Rabinow, Florian Gnad, Pedro Beltrao, Norbert Perrimon
G3 (Bethesda) 2019 Jan; 9(1): 1–11. Published online 2018 Nov 5. doi: 10.1534/g3.118.200637
PMCID:
PMC6325894
AbstractArticlePDF–2.6M
12.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
13.
Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant
Jonas Defoort, Yves Van de Peer, Vanessa Vermeirssen
Nucleic Acids Res. 2018 Jul 27; 46(13): 6480–6503. Published online 2018 Jun 5. doi: 10.1093/nar/gky468
PMCID:
PMC6061849
AbstractArticlePDF–6.6M
14.
Molecular definitions of autophagy and related processes
Lorenzo Galluzzi, Eric H Baehrecke, Andrea Ballabio, Patricia Boya, José Manuel Bravo‐San Pedro, Francesco Cecconi, Augustine M Choi, Charleen T Chu, Patrice Codogno, Maria Isabel Colombo, Ana Maria Cuervo, Jayanta Debnath, Vojo Deretic, Ivan Dikic, Eeva‐Liisa Eskelinen, Gian Maria Fimia, Simone Fulda, David A Gewirtz, Douglas R Green, Malene Hansen, J Wade Harper, Marja Jäättelä, Terje Johansen, Gabor Juhasz, Alec C Kimmelman, Claudine Kraft, Nicholas T Ktistakis, Sharad Kumar, Beth Levine, Carlos Lopez‐Otin, Frank Madeo, Sascha Martens, Jennifer Martinez, Alicia Melendez, Noboru Mizushima, Christian Münz, Leon O Murphy, Josef M Penninger, Mauro Piacentini, Fulvio Reggiori, David C Rubinsztein, Kevin M Ryan, Laura Santambrogio, Luca Scorrano, Anna Katharina Simon, Hans‐Uwe Simon, Anne Simonsen, Nektarios Tavernarakis, Sharon A Tooze, Tamotsu Yoshimori, Junying Yuan, Zhenyu Yue, Qing Zhong, Guido Kroemer
EMBO J. 2017 Jul 3; 36(13): 1811–1836. Published online 2017 Jun 8. doi: 10.15252/embj.201796697
PMCID:
PMC5494474
AbstractArticlePDF–1.0M
15.
The RNA-binding protein repertoire of Arabidopsis thaliana
Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring
Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766
PMCID:
PMC4942612
AbstractArticlePDF–1.2M
16.
The small GTPase Arf1 modulates mitochondrial morphology and function
Karin B Ackema, Jürgen Hench, Stefan Böckler, Shyi Chyi Wang, Ursula Sauder, Heidi Mergentaler, Benedikt Westermann, Frédéric Bard, Stephan Frank, Anne Spang
EMBO J. 2014 Nov 18; 33(22): 2659–2675. Published online 2014 Sep 4. doi: 10.15252/embj.201489039
PMCID:
PMC4282574
AbstractArticlePDF–7.9M
17.
Autophagy protects C. elegans against necrosis during Pseudomonas aeruginosa infection
Cheng-Gang Zou, Yi-Cheng Ma, Li-Li Dai, Ke-Qin Zhang
Proc Natl Acad Sci U S A. 2014 Aug 26; 111(34): 12480–12485. Published online 2014 Aug 11. doi: 10.1073/pnas.1405032111
PMCID:
PMC4151725
AbstractArticlePDF–1.1M
18.
The nascent polypeptide-associated complex is a key regulator of proteostasis
Janine Kirstein-Miles, Annika Scior, Elke Deuerling, Richard I Morimoto
EMBO J. 2013 May 15; 32(10): 1451–1468. Published online 2013 Apr 19. doi: 10.1038/emboj.2013.87
PMCID:
PMC3655472
AbstractArticlePDF–1.7M
19.
The UBXN-2/p37/p47 adaptors of CDC-48/p97 regulate mitosis by limiting the centrosomal recruitment of Aurora A
Elsa Kress, Françoise Schwager, René Holtackers, Jonas Seiler, François Prodon, Esther Zanin, Annika Eiteneuer, Mika Toya, Asako Sugimoto, Hemmo Meyer, Patrick Meraldi, Monica Gotta
J Cell Biol. 2013 May 13; 201(4): 559–575. doi: 10.1083/jcb.201209107
PMCID:
PMC3653362
AbstractArticlePDF–3.7M
20.
CDC-48/p97 Coordinates CDT-1 Degradation with GINS Chromatin Dissociation to Ensure Faithful DNA Replication
André Franz, Michael Orth, Paul A. Pirson, Remi Sonneville, J. Julian Blow, Anton Gartner, Olaf Stemmann, Thorsten Hoppe
Mol Cell. Author manuscript; available in PMC 2012 Aug 28.
Published in final edited form as: Mol Cell. 2011 Oct 7; 44(1): 85–96. doi: 10.1016/j.molcel.2011.08.028
PMCID:
PMC3428722
AbstractArticlePDF–3.2M

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