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Select item 107969811.

Differential heparan sulfate dependency of the Drosophila glypicans

Eriko Nakato, Keisuke Kamimura, Collin Knudsen, Suzuka Masutani, Masahiko Takemura, Yoshiki Hayashi, Takuya Akiyama, Hiroshi Nakato

J Biol Chem. 2024 Jan; 300(1): 105544. Published online 2023 Dec 10. doi: 10.1016/j.jbc.2023.105544

PMCID:: PMC10796981

Abstract Article PDF–3.4M

Select item 102380942.

Shared enhancer gene regulatory networks between wound and oncogenic programs

Swann Floc'hlay, Ramya Balaji, Dimitrije Stanković, Valerie M Christiaens, Carmen Bravo González-Blas, Seppe De Winter, Gert J Hulselmans, Maxime De Waegeneer, Xiaojiang Quan, Duygu Koldere, Mardelle Atkins, Georg Halder, Mirka Uhlirova, Anne-Kathrin Classen, Stein Aerts

eLife. 2023; 12: e81173. Published online 2023 May 3. doi: 10.7554/eLife.81173

PMCID:: PMC10238094

Abstract Article PDF–8.8M

Select item 101138863.

Regulation of morphogen pathways by a Drosophila chondroitin sulfate proteoglycan Windpipe

Woo Seuk Koh, Collin Knudsen, Tomomi Izumikawa, Eriko Nakato, Kristin Grandt, Akiko Kinoshita-Toyoda, Hidenao Toyoda, Hiroshi Nakato

J Cell Sci. 2023 Apr 1; 136(7): jcs260525. Published online 2023 Apr 11. doi: 10.1242/jcs.260525

PMCID:: PMC10113886

Abstract Article

Select item 87772974.

Roles of Drosophila Hox Genes in the Assembly of Neuromuscular Networks and Behavior

Rohit Joshi, Rashmi Sipani, Asif Bakshi

Front Cell Dev Biol. 2021; 9: 786993. Published online 2022 Jan 7. doi: 10.3389/fcell.2021.786993

PMCID:: PMC8777297

Abstract Article PDF–2.1M

Select item 79283035.

Glypicans and Heparan Sulfate in Synaptic Development, Neural Plasticity, and Neurological Disorders

Keisuke Kamimura, Nobuaki Maeda

Front Neural Circuits. 2021; 15: 595596. Published online 2021 Feb 10. doi: 10.3389/fncir.2021.595596

PMCID:: PMC7928303

Abstract Article PDF–2.1M

Select item 73700906.

Rounding up the Usual Suspects: Assessing Yorkie, AP-1, and Stat Coactivation in Tumorigenesis

Fisun Hamaratoglu, Mardelle Atkins

Int J Mol Sci. 2020 Jul; 21(13): 4580. Published online 2020 Jun 27. doi: 10.3390/ijms21134580

PMCID:: PMC7370090

Abstract Article PDF–10M

Select item 69615787.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 67580548.

Genome-Wide Expression Analysis in DrosophilaReveals Genes Controlling Circadian Behavior

M. Fernanda Ceriani, John B. Hogenesch, Marcelo Yanovsky, Satchidananda Panda, Martin Straume, Steve A. Kay

J Neurosci. 2002 Nov 1; 22(21): 9305–9319. doi: 10.1523/JNEUROSCI.22-21-09305.2002

PMCID:: PMC6758054

Abstract Article PDF–406K

Select item 65219439.

Establishment and characterization of Drosophila cell lines mutant for heparan sulfate modifying enzymes

Eriko Nakato, Xin Liu, Inger Eriksson, Maki Yamamoto, Akiko Kinoshita-Toyoda, Hidenao Toyoda, Lena Kjellén, Jin-ping Li, Hiroshi Nakato

Glycobiology. 2019 Jun; 29(6): 479–489. Published online 2019 Apr 24. doi: 10.1093/glycob/cwz020

PMCID:: PMC6521943

Abstract Article PDF–699K

Select item 570780510.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 561728812.

Dendritic space-filling requires a neuronal type-specific extracellular permissive signal in Drosophila

Amy R. Poe, Lingfeng Tang, Bei Wang, Yun Li, Maria L. Sapar, Chun Han

Proc Natl Acad Sci U S A. 2017 Sep 19; 114(38): E8062–E8071. Published online 2017 Sep 5. doi: 10.1073/pnas.1707467114

PMCID:: PMC5617288

Abstract Article PDF–3.5M

Select item 527867213.

Drosophila Sulf1 is required for the termination of intestinal stem cell division during regeneration

Masahiko Takemura, Hiroshi Nakato

J Cell Sci. 2017 Jan 15; 130(2): 332–343. doi: 10.1242/jcs.195305

PMCID:: PMC5278672

Abstract Article

Select item 527863114.

The Drosophila Hox gene Ultrabithorax acts in both muscles and motoneurons to orchestrate formation of specific neuromuscular connections

Christian Hessinger, Gerhard M. Technau, Ana Rogulja-Ortmann

Development. 2017 Jan 1; 144(1): 139–150. doi: 10.1242/dev.143875

PMCID:: PMC5278631

Abstract Article

Select item 502463715.

Mapping signaling pathway cross-talk in Drosophila cells

Noemie Ammeux, Benjamin E. Housden, Andrew Georgiadis, Yanhui Hu, Norbert Perrimon

Proc Natl Acad Sci U S A. 2016 Aug 30; 113(35): 9940–9945. Published online 2016 Aug 15. doi: 10.1073/pnas.1610432113

PMCID:: PMC5024637

Abstract Article PDF–967K

Select item 479113316.

Heparan sulfate regulates the number and centrosome positioning of Drosophila male germline stem cells

Daniel C. Levings, Takeshi Arashiro, Hiroshi Nakato

Mol Biol Cell. 2016 Mar 15; 27(6): 888–896. doi: 10.1091/mbc.E15-07-0528

PMCID:: PMC4791133

Abstract Article PDF–4.2M

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 437648919.

Notum deacylates Wnts to suppress signalling activity

Satoshi Kakugawa, Paul F. Langton, Matthias Zebisch, Steve Howell, Tao-Hsin Chang, Yan Liu, Ten Feizi, Ganka Bineva, Nicola O’Reilly, Ambrosius P. Snijders, E. Yvonne Jones, Jean-Paul Vincent

Nature. Author manuscript; available in PMC 2015 Sep 12.

Published in final edited form as: Nature. 2015 Mar 12; 519(7542): 187–192. Published online 2015 Feb 25. doi: 10.1038/nature14259

PMCID:: PMC4376489

Abstract Article PDF–5.0M

Select item 435288720.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

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