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Select item 110458001.

Loss of TRIM29 mitigates viral myocarditis by attenuating PERK-driven ER stress response in male mice

Junying Wang, Wenting Lu, Jerry Zhang, Yong Du, Mingli Fang, Ao Zhang, Gabriel Sungcad, Samantha Chon, Junji Xing

Nat Commun. 2024; 15: 3481. Published online 2024 Apr 25. doi: 10.1038/s41467-024-44745-x

PMCID:: PMC11045800

Abstract Article PDF–5.0M

Select item 109176602.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 79387703.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 66848314.

Identification of the E3 ligase TRIM29 as a critical checkpoint regulator of natural killer cell functions

Yaling Dou, Junji Xing, Gangcheng Kong, Guangchuan Wang, Xiaohua Lou, Xiang Xiao, Eric Vivier, Xian C. Li, Zhiqiang Zhang

J Immunol. Author manuscript; available in PMC 2020 Aug 15.

Published in final edited form as: J Immunol. 2019 Aug 15; 203(4): 873–880. Published online 2019 Jul 3. doi: 10.4049/jimmunol.1900171

PMCID:: PMC6684831

Abstract Article PDF–1.3M

Select item 65460615.

ATDC is required for the initiation of KRAS-induced pancreatic tumorigenesis

Lidong Wang, Huibin Yang, Andrea Zamperone, Daniel Diolaiti, Phillip L. Palmbos, Ethan V. Abel, Vinee Purohit, Igor Dolgalev, Andrew D. Rhim, Mats Ljungman, Christina H. Hadju, Christopher J. Halbrook, Dafna Bar-Sagi, Marina Pasca di Magliano, Howard C. Crawford, Diane M. Simeone

Genes Dev. 2019 Jun 1; 33(11-12): 641–655. doi: 10.1101/gad.323303.118

PMCID:: PMC6546061

Abstract Article PDF–28M

Select item 64595106.

Mouse screen reveals multiple new genes underlying mouse and human hearing loss

Neil J. Ingham, Selina A. Pearson, Valerie E. Vancollie, Victoria Rook, Morag A. Lewis, Jing Chen, Annalisa Buniello, Elisa Martelletti, Lorenzo Preite, Chi Chung Lam, Felix D. Weiss, Zӧe Powis, Pim Suwannarat, Christopher J. Lelliott, Sally J. Dawson, Jacqueline K. White, Karen P. Steel

PLoS Biol. 2019 Apr; 17(4): e3000194. Published online 2019 Apr 11. doi: 10.1371/journal.pbio.3000194

PMCID:: PMC6459510

Abstract Article PDF–5.1M

Select item 60920217.

TRIM29 negatively regulates the type I interferon production in response to RNA virus

Junji Xing, Ao Zhang, Laurie J. Minze, Xian Chang Li, Dr. Zhiqiang Zhang

J Immunol. Author manuscript; available in PMC 2019 Jul 1.

Published in final edited form as: J Immunol. 2018 Jul 1; 201(1): 183–192. Published online 2018 May 16. doi: 10.4049/jimmunol.1701569

PMCID:: PMC6092021

Abstract Article PDF–875K

Select item 56433388.

TRIM29 promotes DNA virus infections by inhibiting innate immune response

Junji Xing, Ao Zhang, Hua Zhang, Jin Wang, Xian Chang Li, Mu-Sheng Zeng, Zhiqiang Zhang

Nat Commun. 2017; 8: 945. Published online 2017 Oct 16. doi: 10.1038/s41467-017-00101-w

PMCID:: PMC5643338

Abstract Article PDF–1.3M

Select item 55588309.

Identification of a role for TRIM29 in the control of innate immunity in the respiratory tract

Junji Xing, Leiyun Weng, Bin Yuan, Zhuo Wang, Li Jia, Rui Jin, Hongbo Lu, Xian Chang Li, Yong-Jun Liu, Zhiqiang Zhang

Nat Immunol. Author manuscript; available in PMC 2017 Aug 16.

Published in final edited form as: Nat Immunol. 2016 Dec; 17(12): 1373–1380. Published online 2016 Oct 3. doi: 10.1038/ni.3580

Correction in:: Nat Immunol. 2016 Nov 16; 17(12): 1479.

PMCID:: PMC5558830

Abstract Article PDF–2.0M

Select item 553058210.

Systems biology of facial development: contributions of ectoderm and mesenchyme

Joan E. Hooper, Weiguo Feng, Hong Li, Sonia Leach, Tzulip Phang, Charlotte Siska, Kenneth L. Jones, Richard A. Spritz, Lawrence E. Hunter, Trevor Williams

Dev Biol. Author manuscript; available in PMC 2018 Jun 1.

Published in final edited form as: Dev Biol. 2017 Jun 1; 426(1): 97–114. Published online 2017 Mar 29. doi: 10.1016/j.ydbio.2017.03.025

PMCID:: PMC5530582

Abstract Article PDF–3.2M

Select item 529582111.

High-throughput discovery of novel developmental phenotypes

Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray

Nature. Author manuscript; available in PMC 2017 Mar 14.

Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356

Correction in:: Nature. 2017 Nov 16; 551(7680): 398.

PMCID:: PMC5295821

Abstract Article PDF–3.0M

Select item 485249212.

Grainyhead-like 2 downstream targets act to suppress epithelial-to-mesenchymal transition during neural tube closure

Heather J. Ray, Lee A. Niswander

Development. 2016 Apr 1; 143(7): 1192–1204. doi: 10.1242/dev.129825

PMCID:: PMC4852492

Abstract Article

Select item 466822413.

ATDC/TRIM29 drives invasive bladder cancer formation through microRNA-mediated and epigenetic mechanisms

Phillip L. Palmbos, Lidong Wang, Huibin Yang, Yin Wang, Jacob Leflein, McKenzie L. Ahmet, John E. Wilkinson, Chandan Kumar-Sinha, Gina M. Ney, Scott A. Tomlins, Stephanie Daignault, Lakshmi. P. Kunju, Xue-Ru Wu, Yair Lotan, Monica Liebert, Mats E. Ljungman, Diane M. Simeone

Cancer Res. Author manuscript; available in PMC 2016 Dec 1.

Published in final edited form as: Cancer Res. 2015 Dec 1; 75(23): 5155–5166. Published online 2015 Oct 15. doi: 10.1158/0008-5472.CAN-15-0603

PMCID:: PMC4668224

Abstract Article PDF–1.1M

Select item 463178714.

A gene expression resource generated by genome-wide lacZ profiling in the mouse

Elizabeth Tuck, Jeanne Estabel, Anika Oellrich, Anna Karin Maguire, Hibret A. Adissu, Luke Souter, Emma Siragher, Charlotte Lillistone, Angela L. Green, Hannah Wardle-Jones, Damian M. Carragher, Natasha A. Karp, Damian Smedley, Niels C. Adams, Sanger Institute Mouse Genetics Project, James N. Bussell, David J. Adams, Ramiro Ramírez-Solis, Karen P. Steel, Antonella Galli, Jacqueline K. White

Dis Model Mech. 2015 Nov 1; 8(11): 1467–1478. doi: 10.1242/dmm.021238

PMCID:: PMC4631787

Abstract Article

Select item 429813615.

ATDC induces an invasive switch in KRAS-induced pancreatic tumorigenesis

Lidong Wang, Huibin Yang, Ethan V. Abel, Gina M. Ney, Phillip L. Palmbos, Filip Bednar, Yaqing Zhang, Jacob Leflein, Meghna Waghray, Scott Owens, John E. Wilkinson, Jayendra Prasad, Mats Ljungman, Andrew D. Rhim, Marina Pasca di Magliano, Diane M. Simeone

Genes Dev. 2015 Jan 15; 29(2): 171–183. doi: 10.1101/gad.253591.114

PMCID:: PMC4298136

Abstract Article PDF–3.0M

Select item 357241016.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 302253417.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582