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Items: 1 to 20 of 23

1.
Adult and Larval Tracheal Systems Exhibit Different Molecular Architectures in Drosophila
Judith Bossen, Ruben Prange, Jan-Philip Kühle, Sven Künzel, Xiao Niu, Jörg U. Hammel, Laura Krieger, Mirjam Knop, Birte Ehrhardt, Karin Uliczka, Susanne Krauss-Etschmann, Thomas Roeder
Int J Mol Sci. 2023 Mar; 24(6): 5628. Published online 2023 Mar 15. doi: 10.3390/ijms24065628
PMCID:
PMC10052349
AbstractArticlePDF–5.6M
2.
“What You Need, Baby, I Got It”: Transposable Elements as Suppliers of Cis-Operating Sequences in Drosophila
Roberta Moschetti, Antonio Palazzo, Patrizio Lorusso, Luigi Viggiano, René Massimiliano Marsano
Biology (Basel) 2020 Feb; 9(2): 25. Published online 2020 Feb 3. doi: 10.3390/biology9020025
PMCID:
PMC7168160
AbstractArticlePDF–1.2M
3.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
4.
Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs
Hongmei Li, Chuansheng Hu, Ling Bai, Hua Li, Mingfa Li, Xiaodong Zhao, Daniel M. Czajkowsky, Zhifeng Shao
DNA Res. 2016 Dec; 23(6): 571–580. Published online 2016 Aug 24. doi: 10.1093/dnares/dsw040
PMCID:
PMC5144680
AbstractArticlePDF–688K
5.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
6.
Infection Dynamics and Immune Response in a Newly Described Drosophila-Trypanosomatid Association
Phineas T. Hamilton, Jan Votýpka, Anna Dostálová, Vyacheslav Yurchenko, Nathan H. Bird, Julius Lukeš, Bruno Lemaitre, Steve J. Perlman
mBio. 2015 Sep-Oct; 6(5): e01356-15. Published online 2015 Sep 15. doi: 10.1128/mBio.01356-15
PMCID:
PMC4600116
AbstractArticlePDF–1.8M
7.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
8.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
9.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
10.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
11.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
12.
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs
Enrique Blanco, Marina Ruiz-Romero, Sergi Beltran, Manel Bosch, Adrià Punset, Florenci Serras, Montserrat Corominas
BMC Dev Biol. 2010; 10: 94. Published online 2010 Sep 2. doi: 10.1186/1471-213X-10-94
PMCID:
PMC2939566
AbstractArticlePDF–5.1M
13.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
14.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M
15.
Molecular Evolution of Drosophila Cuticular Protein Genes
R. Scott Cornman
PLoS One. 2009; 4(12): e8345. Published online 2009 Dec 17. doi: 10.1371/journal.pone.0008345
PMCID:
PMC2793513
AbstractArticlePDF–2.4M
16.
Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila
Enrique Blanco, Miguel Pignatelli, Sergi Beltran, Adrià Punset, Silvia Pérez-Lluch, Florenci Serras, Roderic Guigó, Montserrat Corominas
Genome Biol. 2008; 9(9): R134. Published online 2008 Sep 10. doi: 10.1186/gb-2008-9-9-r134
PMCID:
PMC2592712
AbstractArticlePDF–859K
17.
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes.
Hugo J Bellen, Robert W Levis, Guochun Liao, Yuchun He, Joseph W Carlson, Garson Tsang, Martha Evans-Holm, P Robin Hiesinger, Karen L Schulze, Gerald M Rubin, Roger A Hoskins, Allan C Spradling
Genetics. 2004 Jun; 167(2): 761–781. doi: 10.1534/genetics.104.026427
PMCID:
PMC1470905
SummaryPDF–631K
18.
A Cluster of Cuticle Protein Genes of Drosophila Melanogaster at 65a: Sequence, Structure and Evolution
J. P. Charles, C. Chihara, S. Nejad, L. M. Riddiford
Genetics. 1997 Nov; 147(3): 1213–1224. doi: 10.1093/genetics/147.3.1213
Correction in:
Genetics, volume 148 on page 921
PMCID:
PMC1208245
SummaryPDF–4.6M
19.
Combined Evidence Annotation of Transposable Elements in Genome Sequences
Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere
PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022
PMCID:
PMC1185648
AbstractArticlePDF–273K
20.
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly
Roger A Hoskins, Christopher D Smith, Joseph W Carlson, A Bernardo Carvalho, Aaron Halpern, Joshua S Kaminker, Cameron Kennedy, Chris J Mungall, Beth A Sullivan, Granger G Sutton, Jiro C Yasuhara, Barbara T Wakimoto, Eugene W Myers, Susan E Celniker, Gerald M Rubin, Gary H Karpen
Genome Biol. 2002; 3(12): research0085.1–85.16. Published online 2002 Dec 31. doi: 10.1186/gb-2002-3-12-research0085
PMCID:
PMC151187
AbstractArticlePDF–280K

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