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Select item 110379291.

Identifying potential dietary treatments for inherited metabolic disorders using Drosophila nutrigenomics

Felipe Martelli, Jiayi Lin, Sarah Mele, Wendy Imlach, Oguz Kanca, Christopher K. Barlow, Jefferson Paril, Ralf B. Schittenhelm, John Christodoulou, Hugo J. Bellen, Matthew D.W. Piper, Travis K. Johnson

Cell Rep. Author manuscript; available in PMC 2024 Apr 23.

Published in final edited form as: Cell Rep. 2024 Mar 26; 43(3): 113861. Published online 2024 Feb 27. doi: 10.1016/j.celrep.2024.113861

PMCID:: PMC11037929

Abstract Article PDF–1.9M

Select item 110353722.

Tet controls axon guidance in early brain development through glutamatergic signaling

Hiep Tran, Le Le, Badri Nath Singh, Joseph Kramer, Ruth Steward

iScience. 2024 May 17; 27(5): 109634. Published online 2024 Apr 1. doi: 10.1016/j.isci.2024.109634

PMCID:: PMC11035372

Abstract Article PDF–3.6M

Select item 105020133.

Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster

Kristina Corthals, Vilma Andersson, Allison Churcher, Johan Reimegård, Anders Enjin

Sci Rep. 2023; 13: 15202. Published online 2023 Sep 14. doi: 10.1038/s41598-023-42506-2

PMCID:: PMC10502013

Abstract Article PDF–5.5M

Select item 102327754.

Drosophila melanogaster as a model to study autophagy in neurodegenerative diseases induced by proteinopathies

Stefania Santarelli, Chiara Londero, Alessia Soldano, Carlotta Candelaresi, Leonardo Todeschini, Luisa Vernizzi, Paola Bellosta

Front Neurosci. 2023; 17: 1082047. Published online 2023 May 18. doi: 10.3389/fnins.2023.1082047

PMCID:: PMC10232775

Abstract Article PDF–2.4M

Select item 102131995.

RNAseq analysis of the drug jian-yan-ling (JYL) using both in vivo and in vitro models

Xiaobo Zhang, Yunliang Zhai, Dandan Zhang, Chang Che, Yayun Zhang, Quan Li, Xue Zhang, Lingrui Zhao

Heliyon. 2023 May; 9(5): e16143. Published online 2023 May 19. doi: 10.1016/j.heliyon.2023.e16143

PMCID:: PMC10213199

Abstract Article PDF–5.2M

Select item 101655416.

Systematic analysis of YFP traps reveals common mRNA/protein discordance in neural tissues

Joshua S. Titlow, Maria Kiourlappou, Ana Palanca, Jeffrey Y. Lee, Dalia S. Gala, Darragh Ennis, Joyce J.S. Yu, Florence L. Young, David Miguel Susano Pinto, Sam Garforth, Helena S. Francis, Finn Strivens, Hugh Mulvey, Alex Dallman-Porter, Staci Thornton, Diana Arman, Marissa J. Millard, Aino I. Järvelin, Mary Kay Thompson, Martin Sargent, Ilias Kounatidis, Richard M. Parton, Stephen Taylor, Ilan Davis

J Cell Biol. 2023 Jun 5; 222(6): e202205129. Published online 2023 May 5. doi: 10.1083/jcb.202205129

PMCID:: PMC10165541

Abstract Article PDF–8.4M

Select item 101057367.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 100789178.

A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi

William W Fisher, Ann S Hammonds, Richard Weiszmann, Benjamin W Booth, Louis Gevirtzman, Jaeda E J Patton, Connor A Kubo, Robert H Waterston, Susan E Celniker

Genetics. 2023 Apr; 223(4): iyad004. Published online 2023 Jan 19. doi: 10.1093/genetics/iyad004

PMCID:: PMC10078917

Abstract Article PDF–18M

Select item 96356449.

Enteric bacterial infection in Drosophila induces whole-body alterations in metabolic gene expression independently of the immune deficiency signaling pathway

Rujuta Deshpande, Byoungchun Lee, Savraj S Grewal

G3 (Bethesda) 2022 Nov; 12(11): jkac163. Published online 2022 Jul 4. doi: 10.1093/g3journal/jkac163

PMCID:: PMC9635644

Abstract Article PDF–2.2M

Select item 940464610.

A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages

Marc Corrales, Benjamin T. Cocanougher, Andrea B. Kohn, Jason D. Wittenbach, Xi S. Long, Andrew Lemire, Albert Cardona, Robert H. Singer, Leonid L. Moroz, Marta Zlatic

Neural Dev. 2022; 17: 8. Published online 2022 Aug 24. doi: 10.1186/s13064-022-00164-6

Correction in:: Neural Dev. 2022; 17: 11.

PMCID:: PMC9404646

Abstract Article PDF–4.1M

Select item 820611511.

Serotonin signaling modulates aging-associated metabolic network integrity in response to nutrient choice in Drosophila melanogaster

Yang Lyu, Daniel E. L. Promislow, Scott D. Pletcher

Commun Biol. 2021; 4: 740. Published online 2021 Jun 15. doi: 10.1038/s42003-021-02260-5

PMCID:: PMC8206115

Abstract Article PDF–3.3M

Select item 814340612.

Genomic and cDNA selection-amplification identifies transcriptome-wide binding sites for the Drosophila protein sex-lethal

Hiren Banerjee, Ravinder Singh

PLoS One. 2021; 16(5): e0250592. Published online 2021 May 24. doi: 10.1371/journal.pone.0250592

PMCID:: PMC8143406

Abstract Article PDF–1.6M

Select item 787014613.

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila

Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li, Robert C Jones, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63856. Published online 2021 Feb 8. doi: 10.7554/eLife.63856

PMCID:: PMC7870146

Abstract Article PDF–11M

Select item 776491014.

Structural Insight into the Contributions of the N-Terminus and Key Active-Site Residues to the Catalytic Efficiency of Glutamine Synthetase 2

Wen-Ting Chen, Hsin-Yu Yang, Chih-Yu Lin, Yi-Zong Lee, Szu-Chin Ma, Wei-Cheng Chen, Hsien-Sheng Yin

Biomolecules. 2020 Dec; 10(12): 1671. Published online 2020 Dec 14. doi: 10.3390/biom10121671

PMCID:: PMC7764910

Abstract Article PDF–3.8M

Select item 731129515.

Transcriptomic and proteomic profiling of glial versus neuronal Dube3a overexpression reveals common molecular changes in gliopathic epilepsies

Kevin A. Hope, Daniel Johnson, P. Winston Miller, Daniel Lopez-Ferrer, David Kakhniashvili, Lawrence T. Reiter

Neurobiol Dis. Author manuscript; available in PMC 2021 Jul 1.

Published in final edited form as: Neurobiol Dis. 2020 Jul; 141: 104879. Published online 2020 Apr 25. doi: 10.1016/j.nbd.2020.104879

PMCID:: PMC7311295

Abstract Article PDF–1.3M

Select item 706935316.

Disrupted Glutamate Signaling in Drosophila Generates Locomotor Rhythms in Constant Light

Renata Van De Maas de Azevedo, Celia Hansen, Ko-Fan Chen, Ezio Rosato, Charalambos P. Kyriacou

Front Physiol. 2020; 11: 145. Published online 2020 Mar 6. doi: 10.3389/fphys.2020.00145

PMCID:: PMC7069353

Abstract Article PDF–3.9M

Select item 698345017.

A cell atlas of the adult Drosophila midgut

Ruei-Jiun Hung, Yanhui Hu, Rory Kirchner, Yifang Liu, Chiwei Xu, Aram Comjean, Sudhir Gopal Tattikota, Fangge Li, Wei Song, Shannan Ho Sui, Norbert Perrimon

Proc Natl Acad Sci U S A. 2020 Jan 21; 117(3): 1514–1523. Published online 2020 Jan 8. doi: 10.1073/pnas.1916820117

PMCID:: PMC6983450

Abstract Article PDF–11M

Select item 696157818.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 689492919.

Single cell transcriptome atlas of the Drosophila larval brain

Clarisse Brunet Avalos, G Larisa Maier, Rémy Bruggmann, Simon G Sprecher

eLife. 2019; 8: e50354. Published online 2019 Nov 20. doi: 10.7554/eLife.50354

PMCID:: PMC6894929

Abstract Article PDF–5.0M

Select item 676470120.

Predicting gene regulatory interactions based on spatial gene expression data and deep learning

Yang Yang, Qingwei Fang, Hong-Bin Shen

PLoS Comput Biol. 2019 Sep; 15(9): e1007324. Published online 2019 Sep 17. doi: 10.1371/journal.pcbi.1007324

PMCID:: PMC6764701

Abstract Article PDF–2.5M

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