PMC Links for GEO Profiles (Select 90398050) - PMC

Select item 105924771.

Btbd11 supports cell-type-specific synaptic function

Alexei M. Bygrave, Ayesha Sengupta, Ella P. Jackert, Mehroz Ahmed, Beloved Adenuga, Erik Nelson, Hana L. Goldschmidt, Richard C. Johnson, Haining Zhong, Felix L. Yeh, Morgan Sheng, Richard L. Huganir

Cell Rep. Author manuscript; available in PMC 2023 Oct 23.

Published in final edited form as: Cell Rep. 2023 Jun 27; 42(6): 112591. Published online 2023 May 31. doi: 10.1016/j.celrep.2023.112591

PMCID:: PMC10592477

Abstract Article PDF–3.6M

Select item 79387702.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 75192253.

Ataxin-1 regulates B cell function and the severity of autoimmune experimental encephalomyelitis

Alessandro Didonna, Ester Canto Puig, Qin Ma, Atsuko Matsunaga, Brenda Ho, Stacy J. Caillier, Hengameh Shams, Nicholas Lee, Stephen L. Hauser, Qiumin Tan, Scott S. Zamvil, Jorge R. Oksenberg

Proc Natl Acad Sci U S A. 2020 Sep 22; 117(38): 23742–23750. Published online 2020 Sep 2. doi: 10.1073/pnas.2003798117

PMCID:: PMC7519225

Abstract Article PDF–1.8M

Select item 64226784.

ATXN1-CIC Complex Is the Primary Driver of Cerebellar Pathology in Spinocerebellar Ataxia Type 1 through a Gain-of-Function Mechanism

Maxime W.C. Rousseaux, Tyler Tschumperlin, Hsiang-Chih Lu, Elizabeth P. Lackey, Vitaliy V. Bondar, Ying-Wooi Wan, Qiumin Tan, Carolyn J. Adamski, Jillian Friedrich, Kirk Twaroski, Weili Chen, Jakub Tolar, Christine Henzler, Ajay Sharma, Aleksandar Bajić, Tao Lin, Lisa Duvick, Zhandong Liu, Roy V. Sillitoe, Huda Y. Zoghbi, Harry T. Orr

Neuron. Author manuscript; available in PMC 2019 Mar 18.

Published in final edited form as: Neuron. 2018 Mar 21; 97(6): 1235–1243.e5. Published online 2018 Mar 8. doi: 10.1016/j.neuron.2018.02.013

PMCID:: PMC6422678

Abstract Article PDF–2.2M

Select item 53740265.

Disruption of the ATXN1-CIC complex causes a spectrum of neurobehavioral phenotypes in mice and humans

Hsiang-Chih Lu, Qiumin Tan, Maxime WC Rousseaux, Wei Wang, Ji-Yoen Kim, Ronald Richman, Ying-Wooi Wan, Szu-Ying Yeh, Jay M Patel, Xiuyun Liu, Tao Lin, Yoontae Lee, John D Fryer, Jing Han, Maria Chahrour, Richard H Finnell, Yunping Lei, Maria E Zurita-Jimenez, Priyanka Ahimaz, Kwame Anyane-Yeboa, Lionel Van Maldergem, Daphne Lehalle, Nolwenn Jean-Marcais, Anne-Laure Mosca-Boidron, Julien Thevenon, Margot A Cousin, Della E Bro, Brendan C Lanpher, Eric W Klee, Nora Alexander, Matthew N Bainbridge, Harry T Orr, Roy V Sillitoe, M. Cecilia Ljungberg, Zhandong Liu, Christian P Schaaf, Huda Y Zoghbi

Nat Genet. Author manuscript; available in PMC 2017 Oct 1.

Published in final edited form as: Nat Genet. 2017 Apr; 49(4): 527–536. Published online 2017 Mar 13. doi: 10.1038/ng.3808

PMCID:: PMC5374026

Abstract Article PDF–2.6M

Select item 36109046.

Ataxin1L Is a Regulator of HSC Function Highlighting the Utility of Cross-Tissue Comparisons for Gene Discovery

Juliette J. Kahle, George P. Souroullas, Peng Yu, Fabian Zohren, Yoontae Lee, Chad A. Shaw, Huda Y. Zoghbi, Margaret A. Goodell

PLoS Genet. 2013 Mar; 9(3): e1003359. Published online 2013 Mar 28. doi: 10.1371/journal.pgen.1003359

PMCID:: PMC3610904

Abstract Article PDF–2.6M

Select item 32538507.

Atxn1 protein family and Cic regulate extracellular matrix remodeling and lung alveolarization

Yoontae Lee, John D. Fryer, Hyojin Kang, Juan Crespo-Barreto, Aaron B. Bowman, Yan Gao, Juliette J. Kahle, Jeong Soo Hong, Farrah Kheradmand, Harry T. Orr, Milton J. Finegold, Huda Y. Zoghbi

Dev Cell. Author manuscript; available in PMC 2012 Apr 18.

Published in final edited form as: Dev Cell. 2011 Oct 18; 21(4): 746–757. doi: 10.1016/j.devcel.2011.08.017

PMCID:: PMC3253850

Abstract Article PDF–2.6M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 29003059.

Partial Loss of Ataxin-1 Function Contributes to Transcriptional Dysregulation in Spinocerebellar Ataxia Type 1 Pathogenesis

Juan Crespo-Barreto, John D. Fryer, Chad A. Shaw, Harry T. Orr, Huda Y. Zoghbi

PLoS Genet. 2010 Jul; 6(7): e1001021. Published online 2010 Jul 8. doi: 10.1371/journal.pgen.1001021

PMCID:: PMC2900305

Abstract Article PDF–1.4M

Select item 122467610.

Boat, an AXH domain protein, suppresses the cytotoxicity of mutant ataxin-1

Akifumi Mizutani, Lei Wang, Harini Rajan, Parminder J S Vig, William A Alaynick, Joshua P Thaler, Chih-Cheng Tsai

EMBO J. 2005 Sep 21; 24(18): 3339–3351. Published online 2005 Aug 25. doi: 10.1038/sj.emboj.7600785

PMCID:: PMC1224676

Abstract Article PDF–1.0M

Select item 31111911.

Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method

Yulan Piao, Naomi T. Ko, Meng K. Lim, Minoru S.H. Ko

Genome Res. 2001 Sep; 11(9): 1553–1558. doi: 10.1101/gr.185501

PMCID:: PMC311119

Abstract Article PDF–743K

Select item 31099212.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098013.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924114.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1683315.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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