PMC Links for GEO Profiles (Select 87607626) - PMC

Kathleen S Molnar, Massimiliano Bonomi, Riccardo Pellarin, Graham D Clinthorne, Gabriel Gonzalez, Shalom D Goldberg, Mark Goulian, Andrej Sali, William F DeGrado

Structure. Author manuscript; available in PMC 2015 Sep 2.

Published in final edited form as: Structure. 2014 Sep 2; 22(9): 1239–1251. Published online 2014 Jul 31. doi: 10.1016/j.str.2014.04.019

PMCID:: PMC4322757

Article PDF–1.8M

Select item 37558874.

Gene Promoter Scan Methodology for Identifying and Classifying Coregulated Promoters

Igor Zwir, Oscar Harari, Eduardo A. Groisman

Methods Enzymol. Author manuscript; available in PMC 2013 Aug 28.

Published in final edited form as: Methods Enzymol. 2007; 422: 361–385. doi: 10.1016/S0076-6879(06)22018-4

PMCID:: PMC3755887

Article PDF–799K

Select item 35366965.

Post-Transcriptional Control of the Escherichia coli PhoQ-PhoP Two-Component System by Multiple sRNAs Involves a Novel Pairing Region of GcvB

Audrey Coornaert, Claude Chiaruttini, Mathias Springer, Maude Guillier

PLoS Genet. 2013 Jan; 9(1): e1003156. Published online 2013 Jan 3. doi: 10.1371/journal.pgen.1003156

PMCID:: PMC3536696

Article PDF–1.9M

Select item 32948716.

Perturbation of the Oxidizing Environment of the Periplasm Stimulates the PhoQ/PhoP System in Escherichia coli

Andrew M. Lippa, Mark Goulian

J Bacteriol. 2012 Mar; 194(6): 1457–1463. doi: 10.1128/JB.06055-11

PMCID:: PMC3294871

Article PDF–1.0M

Select item 29252317.

MicA sRNA links the PhoP regulon to cell envelope stress

Audrey Coornaert, Alisa Lu, Pierre Mandin, Mathias Springer, Susan Gottesman, Maude Guillier

Mol Microbiol. Author manuscript; available in PMC 2011 Apr 1.

Published in final edited form as: Mol Microbiol. 2010 Apr; 76(2): 467–479. Published online 2010 Mar 25. doi: 10.1111/j.1365-2958.2010.07115.x

PMCID:: PMC2925231

Article PDF–1.6M

Select item 28895388.

Transmembrane polar interactions are required for signaling in the Escherichia coli sensor kinase PhoQ

Shalom D. Goldberg, Graham D. Clinthorne, Mark Goulian, William F. DeGrado

Proc Natl Acad Sci U S A. 2010 May 4; 107(18): 8141–8146. Published online 2010 Apr 19. doi: 10.1073/pnas.1003166107

PMCID:: PMC2889538

Article PDF–560K

Select item 28414749.

A PhoQ/P-Regulated small RNA Regulates Sensitivity of Escherichia coli to Antimicrobial Peptides

Kyung Moon, Susan Gottesman

Mol Microbiol. Author manuscript; available in PMC 2010 Dec 1.

Published in final edited form as: Mol Microbiol. 2009 Dec; 74(6): 1314–1330. Published online 2009 Nov 2. doi: 10.1111/j.1365-2958.2009.06944.x

PMCID:: PMC2841474

Article PDF–1.7M

Select item 258227910.

High stimulus unmasks positive feedback in an autoregulated bacterial signaling circuit

Tim Miyashiro, Mark Goulian

Proc Natl Acad Sci U S A. 2008 Nov 11; 105(45): 17457–17462. Published online 2008 Nov 5. doi: 10.1073/pnas.0807278105

PMCID:: PMC2582279

Article PDF–915K

Select item 254265111.

Determination of the physiological dimer interface of the PhoQ sensor domain

Shalom D. Goldberg, Cinque S. Soto, Carey D. Waldburger, William F. DeGrado

J Mol Biol. Author manuscript; available in PMC 2009 Jun 13.

Published in final edited form as: J Mol Biol. 2008 Jun 13; 379(4): 656–665. Published online 2008 Apr 16. doi: 10.1016/j.jmb.2008.04.023

PMCID:: PMC2542651

Article PDF–2.0M

Select item 237623312.

Crystal Structure of a Functional Dimer of the PhoQ Sensor Domain

Jonah Cheung, Craig A. Bingman, Marsha Reyngold, Wayne A. Hendrickson, Carey D. Waldburger

J Biol Chem. 2008 May 16; 283(20): 13762–13770. doi: 10.1074/jbc.M710592200

PMCID:: PMC2376233

Article PDF–493K

Select item 214184213.

B1500, a small membrane protein, connects the two-component systems EvgS/EvgA and PhoQ/PhoP in Escherichia coli

Yoko Eguchi, Junji Itou, Masatake Yamane, Ryo Demizu, Fumiyuki Yamato, Ario Okada, Hirotada Mori, Akinori Kato, Ryutaro Utsumi

Proc Natl Acad Sci U S A. 2007 Nov 20; 104(47): 18712–18717. Published online 2007 Nov 12. doi: 10.1073/pnas.0705768104

PMCID:: PMC2141842

Article PDF–507K

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Stimulus-dependent differential regulation in the Escherichia coli PhoQ–PhoP system

Tim Miyashiro, Mark Goulian

Proc Natl Acad Sci U S A. 2007 Oct 9; 104(41): 16305–16310. Published online 2007 Oct 1. doi: 10.1073/pnas.0700025104

PMCID:: PMC2042202

Article PDF–346K

Select item 168148115.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Article PDF–141K

Select item 132520016.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405