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Items: 19

1.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
2.
Retinol-binding protein 2 (RBP2) binds monoacylglycerols and modulates gut endocrine signaling and body weight
Seung-Ah Lee, Kryscilla Jian Zhang Yang, Pierre-Jacques Brun, Josie A. Silvaroli, Jason J. Yuen, Igor Shmarakov, Hongfeng Jiang, Jun B. Feranil, Xueting Li, Atreju I. Lackey, Wojciech Krężel, Rudolph L. Leibel, Jenny Libien, Judith Storch, Marcin Golczak, William S. Blaner
Sci Adv. 2020 Mar; 6(11): eaay8937. Published online 2020 Mar 11. doi: 10.1126/sciadv.aay8937
PMCID:
PMC7065888
AbstractArticlePDF–1.8M
3.
RBP2 stabilizes slow Cav1.3 Ca2+ channel inactivation properties of cochlear inner hair cells
Nadine J. Ortner, Alexandra Pinggera, Nadja T. Hofer, Anita Siller, Niels Brandt, Andrea Raffeiner, Kristina Vilusic, Isabelle Lang, Kerstin Blum, Gerald J. Obermair, Eduard Stefan, Jutta Engel, Jörg Striessnig
Pflugers Arch. 2020; 472(1): 3–25. Published online 2019 Dec 17. doi: 10.1007/s00424-019-02338-4
PMCID:
PMC6960213
AbstractArticlePDF–4.7M
4.
Chromatin remodeling: demethylating H3K4me3 of type I IFNs gene by Rbp2 through interacting with Piasy for transcriptional attenuation
Xiaoli Yu, Hui Chen, Chen Zuo, Xi Jin, Yibing Yin, Hong Wang, Mei Jin, Keiko Ozato, Songxiao Xu
FASEB J. 2018 Feb; 32(2): 552–567. Published online 2017 Sep 25. doi: 10.1096/fj.201700088RR
PMCID:
PMC6137643
AbstractArticle
5.
Efficient stimulus-secretion coupling at ribbon synapses requires RIM-binding protein tethering of L-type Ca2+ channels
Fujun Luo, Xinran Liu, Thomas C. Südhof, Claudio Acuna
Proc Natl Acad Sci U S A. 2017 Sep 19; 114(38): E8081–E8090. Published online 2017 Sep 5. doi: 10.1073/pnas.1702991114
PMCID:
PMC5617259
AbstractArticlePDF–2.7M
6.
Characterization of the Proteome of Cytoplasmic Lipid Droplets in Mouse Enterocytes after a Dietary Fat Challenge
Theresa D’Aquila, Devika Sirohi, Jeffrey M. Grabowski, Victoria E. Hedrick, Lake N. Paul, Andrew S. Greenberg, Richard J. Kuhn, Kimberly K. Buhman
PLoS One. 2015; 10(5): e0126823. Published online 2015 May 18. doi: 10.1371/journal.pone.0126823
PMCID:
PMC4436333
AbstractArticlePDF–4.3M
7.
The retinaldehyde reductase DHRS3 is essential for preventing the formation of excess retinoic acid during embryonic development
Sara E. Billings, Keely Pierzchalski, Naomi E. Butler Tjaden, Xiao-Yan Pang, Paul A. Trainor, Maureen A. Kane, Alexander R. Moise
FASEB J. 2013 Dec; 27(12): 4877–4889. doi: 10.1096/fj.13-227967
PMCID:
PMC3834788
AbstractArticle
8.
Epithelial Expression of the Cytosolic Retinoid Chaperone Cellular Retinol Binding Protein II Is Essential for in Vivo Imprinting of Local Gut Dendritic Cells by Lumenal Retinoids
Keely G. McDonald, Matthew R. Leach, Kaitlin W.M. Brooke, Caihong Wang, Leroy W. Wheeler, Elyse K. Hanly, Christopher W. Rowley, Marc S. Levin, Michael Wagner, Ellen Li, Rodney D. Newberry
Am J Pathol. 2012 Mar; 180(3): 984–997. doi: 10.1016/j.ajpath.2011.11.009
PMCID:
PMC3349881
AbstractArticlePDF–2.4M
9.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
10.
Loss of the retinoblastoma binding protein 2 (RBP2) histone demethylase suppresses tumorigenesis in mice lacking Rb1 or Men1
Wenchu Lin, Jian Cao, Jiayun Liu, Michael L. Beshiri, Yuko Fujiwara, Joshua Francis, Andrew D. Cherniack, Christoph Geisen, Lauren P. Blair, Mike R. Zou, Xiaohua Shen, Dan Kawamori, Zongzhi Liu, Chiara Grisanzio, Hideo Watanabe, Yoji Andrew Minamishima, Qing Zhang, Rohit N. Kulkarni, Sabina Signoretti, Scott J. Rodig, Roderick T. Bronson, Stuart H. Orkin, David P. Tuck, Elizaveta V. Benevolenskaya, Matthew Meyerson, William G. Kaelin, Jr, Qin Yan
Proc Natl Acad Sci U S A. 2011 Aug 16; 108(33): 13379–13386. Published online 2011 Jul 25. doi: 10.1073/pnas.1110104108
PMCID:
PMC3158206
AbstractArticlePDF–1.8M
11.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
12.
In Vitro and In Vivo Characterization of Retinoid Synthesis from β-carotene
Yvette Fierce, Milena de Morais Vieira, Roseann Piantedosi, Adrian Wyss, William S. Blaner, Jisun Paik
Arch Biochem Biophys. Author manuscript; available in PMC 2009 Apr 15.
Published in final edited form as: Arch Biochem Biophys. 2008 Apr 15; 472(2): 126–138. Published online 2008 Feb 14. doi: 10.1016/j.abb.2008.02.010
PMCID:
PMC2587144
AbstractArticlePDF–1.5M
13.
The Molecular Basis of Retinoid Absorption: A Genetic Dissection
Nuttaporn Wongsiriroj, Roseann Piantedosi, Krzysztof Palczewski, Ira J. Goldberg, Thomas P. Johnston, Ellen Li, William S. Blaner
J Biol Chem. 2008 May 16; 283(20): 13510–13519. doi: 10.1074/jbc.M800777200
PMCID:
PMC2376245
AbstractArticlePDF–477K
14.
Ontogeny of rdh9 (Crad3) expression: ablation causes changes in retinoid and steroid metabolizing enzymes, but RXR and androgen signaling seem normal
Peirong Hu, Min Zhang, Joseph L. Napoli
Biochim Biophys Acta. Author manuscript; available in PMC 2007 May 1.
Published in final edited form as: Biochim Biophys Acta. 2007 Apr; 1770(4): 694–705. Published online 2006 Dec 24. doi: 10.1016/j.bbagen.2006.12.008
PMCID:
PMC1847623
AbstractArticlePDF–1.6M
15.
Cellular retinol-binding protein I is essential for vitamin A homeostasis.
N B Ghyselinck, C Båvik, V Sapin, M Mark, D Bonnier, C Hindelang, A Dierich, C B Nilsson, H Håkansson, P Sauvant, V Azaïs-Braesco, M Frasson, S Picaud, P Chambon
EMBO J. 1999 Sep 15; 18(18): 4903–4914. doi: 10.1093/emboj/18.18.4903
PMCID:
PMC1171562
SummaryPDF–822K
16.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
17.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
18.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
19.
Gecko ι-crystallin: How cellular retinol-binding protein became an eye lens ultraviolet filter
Paul J. L. Werten, Beate Röll, Daan M. F. van Aalten, Wilfried W. de Jong
Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3282–3287. Published online 2000 Mar 21. doi: 10.1073/pnas.050500597
PMCID:
PMC16230
AbstractArticlePDF–264K

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