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Items: 1 to 20 of 45

1.
Chapter 4. Histone demethylase KDM3 (JMJD1) in transcriptional regulation and cancer progression
Lingling Fan, Sudeep Khadka, Jianfei Qi
Adv Exp Med Biol. Author manuscript; available in PMC 2024 Apr 26.
Published in final edited form as: Adv Exp Med Biol. 2023; 1433: 69–86. doi: 10.1007/978-3-031-38176-8_4
PMCID:
PMC11052651
AbstractArticlePDF–998K
2.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
3.
Mapping Brain Gene Coexpression in Daytime Transcriptomes Unveils Diurnal Molecular Networks and Deciphers Perturbation Gene Signatures
Nan Wang, Peter Langfelder, Matthew Stricos, Lalini Ramanathan, Jeffrey B. Richman, Raymond Vaca, Mary Plascencia, Xiaofeng Gu, Shasha Zhang, T. Katherine Tamai, Liguo Zhang, Fuying Gao, Koliane Ouk, Xiang Lu, Leonya Ivanov, Tom Vogt, Qing Richard Lu, A. Jennifer Morton, Christopher Colwell, Jeffrey S. Aaronson, Jim Rosinski, Steve Horvath, X. William Yang
Neuron. Author manuscript; available in PMC 2023 Oct 19.
Published in final edited form as: Neuron. 2022 Oct 19; 110(20): 3318–3338.e9. doi: 10.1016/j.neuron.2022.09.028
PMCID:
PMC9665885
AbstractArticlePDF–4.5M
4.
LncRNA HOX transcript antisense RNA mitigates cardiac function injury in chronic heart failure via regulating microRNA‐30a‐5p to target KDM3A
Xiaoyun Zhang, Yakun Gao, Hongyu Wu, Yong Mao, Yanqing Qi
J Cell Mol Med. 2022 Mar; 26(5): 1473–1485. Published online 2022 Jan 26. doi: 10.1111/jcmm.17160
PMCID:
PMC8899154
AbstractArticlePDF–2.3M
5.
Identification of Jmjd3 as an Essential Epigenetic Regulator of Hox Gene Temporal Collinear Activation for Body Axial Patterning in Mice
Feng Zhang, Xiong Zhao, Runmin Jiang, Yuying Wang, Xinli Wang, Yu Gu, Longyong Xu, Jing Ye, Charlie Degui Chen, Shuangping Guo, Dawei Zhang, Daqing Zhao
Front Cell Dev Biol. 2021; 9: 642931. Published online 2021 Jul 21. doi: 10.3389/fcell.2021.642931
PMCID:
PMC8333871
AbstractArticlePDF–1.4M
6.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
7.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
8.
H3K9 Demethylases JMJD1A and JMJD1B Control Prospermatogonia to Spermatogonia Transition in Mouse Germline
Shunsuke Kuroki, Ryo Maeda, Masashi Yano, Satsuki Kitano, Hitoshi Miyachi, Mikiko Fukuda, Yoichi Shinkai, Makoto Tachibana
Stem Cell Reports. 2020 Aug 11; 15(2): 424–438. Published online 2020 Jul 16. doi: 10.1016/j.stemcr.2020.06.013
PMCID:
PMC7419704
AbstractArticlePDF–5.2M
9.
JMJD1A Represses the Development of Cardiomyocyte Hypertrophy by Regulating the Expression of Catalase
Rongjia Zang, Qingyun Tan, Fanrong Zeng, Dongwei Wang, Shuang Yu, Qingdong Wang
Biomed Res Int. 2020; 2020: 5081323. Published online 2020 May 12. doi: 10.1155/2020/5081323
PMCID:
PMC7243027
AbstractArticlePDF–2.1M
10.
TET2 catalyzes active DNA demethylation of the Sry promoter and enhances its expression
Naoki Okashita, Shunsuke Kuroki, Ryo Maeda, Makoto Tachibana
Sci Rep. 2019; 9: 13462. Published online 2019 Sep 17. doi: 10.1038/s41598-019-50058-7
PMCID:
PMC6748950
AbstractArticlePDF–1.3M
11.
Histone Lys demethylase KDM3C demonstrates anti-inflammatory effects by suppressing NF-κB signaling and osteoclastogenesis
Jae Young Lee, Shebli Mehrazarin, Abdullah Alshaikh, Sol Kim, Wei Chen, Renate Lux, Yousang Gwack, Reuben H. Kim, Mo K. Kang
FASEB J. 2019 Sep; 33(9): 10515–10527. Published online 2019 Jun 28. doi: 10.1096/fj.201900154RR
PMCID:
PMC6704463
AbstractArticle
12.
Histone lysine dimethyl-demethylase KDM3A controls pathological cardiac hypertrophy and fibrosis
Qing-Jun Zhang, Tram Anh T. Tran, Ming Wang, Mark J. Ranek, Kristen M. Kokkonen-Simon, Jason Gao, Xiang Luo, Wei Tan, Viktoriia Kyrychenko, Lan Liao, Jianming Xu, Joseph A. Hill, Eric N. Olson, David A. Kass, Elisabeth D. Martinez, Zhi-Ping Liu
Nat Commun. 2018; 9: 5230. Published online 2018 Dec 7. doi: 10.1038/s41467-018-07173-2
PMCID:
PMC6286331
AbstractArticlePDF–3.1M
13.
Histone demethylase JMJD1A promotes colorectal cancer growth and metastasis by enhancing Wnt/β-catenin signaling
Kesong Peng, Guoqiang Su, Jinmeng Ji, Xiaojia Yang, Mengmeng Miao, Pingli Mo, Ming Li, Jianming Xu, Wengang Li, Chundong Yu
J Biol Chem. 2018 Jul 6; 293(27): 10606–10619. Published online 2018 May 25. doi: 10.1074/jbc.RA118.001730
PMCID:
PMC6036217
AbstractArticlePDF–3.6M
14.
Combined Loss of JMJD1A and JMJD1B Reveals Critical Roles for H3K9 Demethylation in the Maintenance of Embryonic Stem Cells and Early Embryogenesis
Shunsuke Kuroki, Yuji Nakai, Ryo Maeda, Naoki Okashita, Mika Akiyoshi, Yutaro Yamaguchi, Satsuki Kitano, Hitoshi Miyachi, Ryuichiro Nakato, Kenji Ichiyanagi, Katsuhiko Shirahige, Hiroshi Kimura, Yoichi Shinkai, Makoto Tachibana
Stem Cell Reports. 2018 Apr 10; 10(4): 1340–1354. Published online 2018 Mar 8. doi: 10.1016/j.stemcr.2018.02.002
PMCID:
PMC5998703
AbstractArticlePDF–3.4M
15.
Histone demethylase JMJD1A coordinates acute and chronic adaptation to cold stress via thermogenic phospho-switch
Yohei Abe, Yosuke Fujiwara, Hiroki Takahashi, Yoshihiro Matsumura, Tomonobu Sawada, Shuying Jiang, Ryo Nakaki, Aoi Uchida, Noriko Nagao, Makoto Naito, Shingo Kajimura, Hiroshi Kimura, Timothy F. Osborne, Hiroyuki Aburatani, Tatsuhiko Kodama, Takeshi Inagaki, Juro Sakai
Nat Commun. 2018; 9: 1566. Published online 2018 Apr 19. doi: 10.1038/s41467-018-03868-8
PMCID:
PMC5908789
AbstractArticlePDF–2.2M
16.
CITGeneDB: a comprehensive database of human and mouse genes enhancing or suppressing cold-induced thermogenesis validated by perturbation experiments in mice
Jin Li, Su-Ping Deng, Gang Wei, Peng Yu
Database (Oxford) 2018; 2018: bay012. Published online 2018 Mar 23. doi: 10.1093/database/bay012
PMCID:
PMC5868181
AbstractArticlePDF–653K
17.
Rescuing the aberrant sex development of H3K9 demethylase Jmjd1a-deficient mice by modulating H3K9 methylation balance
Shunsuke Kuroki, Naoki Okashita, Shoko Baba, Ryo Maeda, Shingo Miyawaki, Masashi Yano, Miyoko Yamaguchi, Satsuki Kitano, Hitoshi Miyachi, Akihiro Itoh, Minoru Yoshida, Makoto Tachibana
PLoS Genet. 2017 Sep; 13(9): e1007034. Published online 2017 Sep 26. doi: 10.1371/journal.pgen.1007034
PMCID:
PMC5630185
AbstractArticlePDF–12M
18.
Zfp296 negatively regulates H3K9 methylation in embryonic development as a component of heterochromatin
Takumi Matsuura, Satsuki Miyazaki, Tatsushi Miyazaki, Fumi Tashiro, Jun-ichi Miyazaki
Sci Rep. 2017; 7: 12462. Published online 2017 Sep 29. doi: 10.1038/s41598-017-12772-y
PMCID:
PMC5622089
AbstractArticlePDF–8.7M
19.
A UBE2O-AMPKα2 Axis That Promotes Tumor Initiation and Progression Offers Opportunities for Therapy
Isabelle K. Vila, Yixin Yao, Goeun Kim, Weiya Xia, Hyejin Kim, Sun-Joong Kim, Mi Kyung Park, James P. Hwang, Enrique González Billalabeitia, Mien-Chie Hung, Su Jung Song, Min Sup Song
Cancer Cell. Author manuscript; available in PMC 2018 Feb 13.
Published in final edited form as: Cancer Cell. 2017 Feb 13; 31(2): 208–224. Published online 2017 Feb 2. doi: 10.1016/j.ccell.2017.01.003
PMCID:
PMC5463996
AbstractArticlePDF–2.6M
20.
KDM3A coordinates actin dynamics with intraflagellar transport to regulate cilia stability
Patricia L. Yeyati, Rachel Schiller, Girish Mali, Ioannis Kasioulis, Akane Kawamura, Ian R. Adams, Christopher Playfoot, Nick Gilbert, Veronica van Heyningen, Jimi Wills, Alex von Kriegsheim, Andrew Finch, Juro Sakai, Christopher J. Schofield, Ian J. Jackson, Pleasantine Mill
J Cell Biol. 2017 Apr 3; 216(4): 999–1013. doi: 10.1083/jcb.201607032
PMCID:
PMC5379941
AbstractArticlePDF–2.9M

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