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Select item 71029481.

A conserved sequence signature is essential for robust plant miRNA biogenesis

Anushree Narjala, Ashwin Nair, Varsha Tirumalai, G Vivek Hari Sundar, Padubidri V Shivaprasad

Nucleic Acids Res. 2020 Apr 6; 48(6): 3103–3118. Published online 2020 Feb 6. doi: 10.1093/nar/gkaa077

PMCID:: PMC7102948

Abstract Article PDF–6.0M

Select item 61584942.

SMA1, a homolog of the splicing factor Prp28, has a multifaceted role in miRNA biogenesis in Arabidopsis

Shengjun Li, Ran Xu, Aixia Li, Kan Liu, Liqing Gu, Mu Li, Hairui Zhang, Yueying Zhang, Shangshang Zhuang, Quanhui Wang, Gang Gao, Na Li, Chi Zhang, Yunhai Li, Bin Yu

Nucleic Acids Res. 2018 Sep 28; 46(17): 9148–9159. Published online 2018 Jun 30. doi: 10.1093/nar/gky591

PMCID:: PMC6158494

Abstract Article PDF–5.3M

Select item 60530153.

DAWDLE Interacts with DICER-LIKE Proteins to Mediate Small RNA Biogenesis

Shuxin Zhang, Yongchao Dou, Shengjun Li, Guodong Ren, David Chevalier, Chi Zhang, Bin Yu

Plant Physiol. 2018 Jul; 177(3): 1142–1151. Published online 2018 May 21. doi: 10.1104/pp.18.00354

PMCID:: PMC6053015

Abstract Article PDF–1.2M

Select item 58625024.

Coordinated regulation of Arabidopsis microRNA biogenesis and red light signaling through Dicer-like 1 and phytochrome-interacting factor 4

Zhenfei Sun, Min Li, Ying Zhou, Tongtong Guo, Yin Liu, Hui Zhang, Yuda Fang

PLoS Genet. 2018 Mar; 14(3): e1007247. Published online 2018 Mar 9. doi: 10.1371/journal.pgen.1007247

PMCID:: PMC5862502

Abstract Article PDF–16M

Select item 54130605.

The SnRK2 kinases modulate miRNA accumulation in Arabidopsis

Jun Yan, Pengcheng Wang, Bangshing Wang, Chuan-Chih Hsu, Kai Tang, Hairong Zhang, Yueh-Ju Hou, Yang Zhao, Qiming Wang, Chunzhao Zhao, Xiaohong Zhu, W. Andy Tao, Jianming Li, Jian-Kang Zhu

PLoS Genet. 2017 Apr; 13(4): e1006753. Published online 2017 Apr 18. doi: 10.1371/journal.pgen.1006753

PMCID:: PMC5413060

Abstract Article PDF–34M

Select item 51477686.

Intron Lariat RNA Inhibits MicroRNA Biogenesis by Sequestering the Dicing Complex in Arabidopsis

Ziwei Li, Shengpeng Wang, Jinping Cheng, Chuanbin Su, Songxiao Zhong, Qi Liu, Yuda Fang, Yao Yu, Hong Lv, Yun Zheng, Binglian Zheng

PLoS Genet. 2016 Nov; 12(11): e1006422. Published online 2016 Nov 21. doi: 10.1371/journal.pgen.1006422

PMCID:: PMC5147768

Abstract Article PDF–3.5M

Select item 51373727.

CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in microRNA Metabolism in Arabidopsis thaliana

Wonkeun Park, Junjie Li, Rentao Song, Joachim Messing, Xuemei Chen

Curr Biol. Author manuscript; available in PMC 2016 Dec 5.

Published in final edited form as: Curr Biol. 2002 Sep 3; 12(17): 1484–1495. doi: 10.1016/s0960-9822(02)01017-5

PMCID:: PMC5137372

Abstract Article PDF–746K

Select item 51277078.

microRNA biogenesis and function in plants

Xuemei Chen

FEBS Lett. Author manuscript; available in PMC 2016 Nov 29.

Published in final edited form as: FEBS Lett. 2005 Oct 31; 579(26): 5923–5931. Published online 2005 Aug 9. doi: 10.1016/j.febslet.2005.07.071

PMCID:: PMC5127707

Abstract Article PDF–458K

Select item 46087669.

The Roles of Arabidopsis CDF2 in Transcriptional and Posttranscriptional Regulation of Primary MicroRNAs

Zhenfei Sun, Tongtong Guo, Yin Liu, Qi Liu, Yuda Fang

PLoS Genet. 2015 Oct; 11(10): e1005598. Published online 2015 Oct 16. doi: 10.1371/journal.pgen.1005598

Correction in:: PLoS Genet. 2015 Nov; 11(11): e1005700.

PMCID:: PMC4608766

Abstract Article PDF–2.1M

Select item 451388110.

Induced folding in RNA recognition by Arabidopsis thaliana DCL1

Irina P. Suarez, Paula Burdisso, Matthieu P. M. H. Benoit, Jèrôme Boisbouvier, Rodolfo M. Rasia

Nucleic Acids Res. 2015 Jul 27; 43(13): 6607–6619. Published online 2015 Jun 22. doi: 10.1093/nar/gkv627

PMCID:: PMC4513881

Abstract Article PDF–5.2M

Select item 435770711.

Functional mapping of the plant small RNA methyltransferase: HEN1 physically interacts with HYL1 and DICER-LIKE 1 proteins

Simona Baranauskė, Milda Mickutė, Alexandra Plotnikova, Andreas Finke, Česlovas Venclovas, Saulius Klimašauskas, Giedrius Vilkaitis

Nucleic Acids Res. 2015 Mar 11; 43(5): 2802–2812. Published online 2015 Feb 12. doi: 10.1093/nar/gkv102

PMCID:: PMC4357707

Abstract Article PDF–2.4M

Select item 425620612.

PRL1, an RNA-Binding Protein, Positively Regulates the Accumulation of miRNAs and siRNAs in Arabidopsis

Shuxin Zhang, Yuhui Liu, Bin Yu

PLoS Genet. 2014 Dec; 10(12): e1004841. Published online 2014 Dec 4. doi: 10.1371/journal.pgen.1004841

PMCID:: PMC4256206

Abstract Article PDF–1.2M

Select item 423176513.

Homodimerization of HYL1 ensures the correct selection of cleavage sites in primary miRNA

Xi Yang, Wenqing Ren, Qiuxia Zhao, Peng Zhang, Feijie Wu, Yuke He

Nucleic Acids Res. 2014 Oct 29; 42(19): 12224–12236. Published online 2014 Oct 7. doi: 10.1093/nar/gku907

PMCID:: PMC4231765

Abstract Article PDF–7.6M

Select item 404484114.

Global Regulation of Embryonic Patterning in Arabidopsis by MicroRNAs

William F. Seefried, Matthew R. Willmann, Rachel L. Clausen, Pablo D. Jenik

Plant Physiol. 2014 Jun; 165(2): 670–687. Published online 2014 May 1. doi: 10.1104/pp.114.240846

PMCID:: PMC4044841

Abstract Article PDF–1.3M

Select item 398300015.

Nucleolus-tethering system (NoTS) reveals that assembly of photobodies follows a self-organization model

Yin Liu, Qi Liu, Qingqing Yan, Leilei Shi, Yuda Fang

Mol Biol Cell. 2014 Apr 15; 25(8): 1366–1373. doi: 10.1091/mbc.E13-09-0527

PMCID:: PMC3983000

Abstract Article PDF–789K

Select item 380860416.

CDC5, a DNA binding protein, positively regulates posttranscriptional processing and/or transcription of primary microRNA transcripts

Shuxin Zhang, Meng Xie, Guodong Ren, Bin Yu

Proc Natl Acad Sci U S A. 2013 Oct 22; 110(43): 17588–17593. Published online 2013 Oct 7. doi: 10.1073/pnas.1310644110

PMCID:: PMC3808604

Abstract Article PDF–1.0M

Select item 379943517.

Dissecting the interactions of SERRATE with RNA and DICER-LIKE 1 in Arabidopsis microRNA precursor processing

Yuji Iwata, Masateru Takahashi, Nina V. Fedoroff, Samir M. Hamdan

Nucleic Acids Res. 2013 Oct; 41(19): 9129–9140. Published online 2013 Aug 5. doi: 10.1093/nar/gkt667

PMCID:: PMC3799435

Abstract Article PDF–6.0M

Select item 376640218.

Bi-directional processing of pri-miRNAs with branched terminal loops by Arabidopsis Dicer-like1

Hongliang Zhu, Yuyi Zhou, Claudia Castillo-González, Amber Lu, Chunxiao Ge, Ying-Tao Zhao, Liusheng Duan, Zhaohu Li, Michael J. Axtell, Xiu-Jie Wang, Xiuren Zhang

Nat Struct Mol Biol. Author manuscript; available in PMC 2014 Mar 1.

Published in final edited form as: Nat Struct Mol Biol. 2013 Sep; 20(9): 1106–1115. Published online 2013 Aug 11. doi: 10.1038/nsmb.2646