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Items: 1 to 20 of 25

1.
BRCA1 and 53BP1 Regulate Reprogramming Efficiency by Mediating DNA Repair Pathway Choice at Replication-associated Double-Strand Breaks
Daniela Georgieva, Ning Wang, Angelo Taglialatela, Stepan Jerabek, Colleen R. Reczek, Pei Xin Lim, Julie Sung, Qian Du, Michiko Horiguchi, Maria Jasin, Alberto Ciccia, Richard Baer, Dieter Egli
Cell Rep. Author manuscript; available in PMC 2024 Jul 25.
Published in final edited form as: Cell Rep. 2024 Apr 23; 43(4): 114006. Published online 2024 Mar 30. doi: 10.1016/j.celrep.2024.114006
PMCID:
PMC11272184
AbstractArticlePDF–2.7M
2.
Aberrant Zip14 expression in muscle is associated with cachexia in a Bard1‐deficient mouse model of breast cancer metastasis
Ahmad Rushdi Shakri, Timothy James Zhong, Wanchao Ma, Courtney Coker, Rohaan Hegde, Hanna Scholze, Vanessa Chin, Matthias Szabolcs, Hanina Hibshoosh, Kurenai Tanji, Richard Baer, Anup Kumar Biswas, Swarnali Acharyya
Cancer Med. 2020 Sep; 9(18): 6766–6775. Published online 2020 Jul 30. doi: 10.1002/cam4.3242
PMCID:
PMC7520359
AbstractArticlePDF–895K
3.
CtIP-BRCA1 complex and MRE11 maintain replication forks in the presence of chain terminating nucleoside analogs
Mohiuddin Mohiuddin, Md Maminur Rahman, Julian E Sale, Christopher E Pearson
Nucleic Acids Res. 2019 Apr 8; 47(6): 2966–2980. Published online 2019 Jan 18. doi: 10.1093/nar/gkz009
PMCID:
PMC6451104
AbstractArticlePDF–3.0M
4.
The deubiquitylating enzyme USP15 regulates homologous recombination repair and cancer cell response to PARP inhibitors
Yihan Peng, Qingchao Liao, Wei Tan, Changmin Peng, Zhaohua Hu, Yali Chen, Zhuqing Li, Jing Li, Bei Zhen, Wenge Zhu, Xiangpan Li, Yi Yao, Qibin Song, Chengsheng Liu, Xiangdong Qi, Fuchu He, Huadong Pei
Nat Commun. 2019; 10: 1224. Published online 2019 Mar 15. doi: 10.1038/s41467-019-09232-8
PMCID:
PMC6420636
AbstractArticlePDF–3.9M
5.
MiR-210-3p protects endometriotic cells from oxidative stress-induced cell cycle arrest by targeting BARD1
Yongdong Dai, Xiang Lin, Wenzhi Xu, Xiaona Lin, Qianmeng Huang, Libing Shi, Yibin Pan, Yinli Zhang, Yunshan Zhu, Chao Li, Lulu Liu, Songying Zhang
Cell Death Dis. 2019 Feb; 10(2): 144. Published online 2019 Feb 13. doi: 10.1038/s41419-019-1395-6
PMCID:
PMC6374490
AbstractArticlePDF–3.9M
6.
The BRCT domains of the BRCA1 and BARD1 tumor suppressors differentially regulate homology-directed repair and stalled fork protection
David Billing, Michiko Horiguchi, Foon Wu-Baer, Angelo Taglialatela, Giuseppe Leuzzi, Silvia Alvarez Nanez, Wenxia Jiang, Shan Zha, Matthias Szabolcs, Chyuan-Sheng Lin, Alberto Ciccia, Richard Baer
Mol Cell. Author manuscript; available in PMC 2019 Oct 4.
Published in final edited form as: Mol Cell. 2018 Oct 4; 72(1): 127–139.e8. Published online 2018 Sep 20. doi: 10.1016/j.molcel.2018.08.016
PMCID:
PMC6347115
AbstractArticlePDF–2.6M
7.
The MRE11–RAD50–NBS1 Complex Conducts the Orchestration of Damage Signaling and Outcomes to Stress in DNA Replication and Repair
Aleem Syed, John A. Tainer
Annu Rev Biochem. Author manuscript; available in PMC 2018 Aug 5.
Published in final edited form as: Annu Rev Biochem. 2018 Jun 20; 87: 263–294. Published online 2018 Apr 25. doi: 10.1146/annurev-biochem-062917-012415
PMCID:
PMC6076887
AbstractArticlePDF–1.0M
8.
BARD1 mediates TGF-β signaling in pulmonary fibrosis
Pierre-Alain André, Cecilia M. Prêle, Sarah Vierkotten, Stéphanie Carnesecchi, Yves Donati, Rachel C. Chambers, Jean-Claude Pache, Bruno Crestani, Constance Barazzone-Argiroffo, Melanie Königshoff, Geoffrey J. Laurent, Irmgard Irminger-Finger
Respir Res. 2015; 16: 118. Published online 2015 Sep 29. doi: 10.1186/s12931-015-0278-3
PMCID:
PMC4587901
AbstractArticlePDF–2.0M
9.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
10.
Atypical E2F Repressors and Activators Coordinate Placental Development
Madhu M. Ouseph, Jing Li, Hui-Zi Chen, Thierry Pécot, Pamela Wenzel, John C. Thompson, Grant Comstock, Veda Chokshi, Morgan Byrne, Braxton Forde, Jean-Leon Chong, Kun Huang, Raghu Machiraju, Alain de Bruin, Gustavo Leone
Dev Cell. Author manuscript; available in PMC 2013 Apr 17.
Published in final edited form as: Dev Cell. 2012 Apr 17; 22(4): 849–862. doi: 10.1016/j.devcel.2012.01.013
PMCID:
PMC3483796
AbstractArticlePDF–5.0M
11.
BRCA1 tumor suppressor network: focusing on its tail
Bin Wang
Cell Biosci. 2012; 2: 6. Published online 2012 Feb 27. doi: 10.1186/2045-3701-2-6
PMCID:
PMC3315748
AbstractArticlePDF–710K
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
14.
Differential Regulation of JAMM Domain Deubiquitinating Enzyme Activity within the RAP80 Complex
Jeffrey Patterson-Fortin, Genze Shao, Heidi Bretscher, Troy E. Messick, Roger A. Greenberg
J Biol Chem. 2010 Oct 1; 285(40): 30971–30981. Published online 2010 Jul 22. doi: 10.1074/jbc.M110.135319
PMCID:
PMC2945588
AbstractArticlePDF–2.1M
15.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
16.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
17.
The basal-like mammary carcinomas induced by Brca1 or Bard1 inactivation implicate the BRCA1/BARD1 heterodimer in tumor suppression
Reena Shakya, Matthias Szabolcs, Ellen McCarthy, Elson Ospina, Katia Basso, Subhadra Nandula, Vundavalli Murty, Richard Baer, Thomas Ludwig
Proc Natl Acad Sci U S A. 2008 May 13; 105(19): 7040–7045. Published online 2008 Apr 28. doi: 10.1073/pnas.0711032105
PMCID:
PMC2365565
AbstractArticlePDF–2.2M
18.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
19.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
20.
Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention
Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands
Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100
Correction in:
Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.
PMCID:
PMC283554
AbstractArticlePDF–481K

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