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Items: 17

1.
Assessment of community efforts to advance network-based prediction of protein–protein interactions
Xu-Wen Wang, Lorenzo Madeddu, Kerstin Spirohn, Leonardo Martini, Adriano Fazzone, Luca Becchetti, Thomas P. Wytock, István A. Kovács, Olivér M. Balogh, Bettina Benczik, Mátyás Pétervári, Bence Ágg, Péter Ferdinandy, Loan Vulliard, Jörg Menche, Stefania Colonnese, Manuela Petti, Gaetano Scarano, Francesca Cuomo, Tong Hao, Florent Laval, Luc Willems, Jean-Claude Twizere, Marc Vidal, Michael A. Calderwood, Enrico Petrillo, Albert-László Barabási, Edwin K. Silverman, Joseph Loscalzo, Paola Velardi, Yang-Yu Liu
Nat Commun. 2023; 14: 1582. Published online 2023 Mar 22. doi: 10.1038/s41467-023-37079-7
PMCID:
PMC10033937
AbstractArticlePDF–1.5M
2.
Physical and functional interactome atlas of human receptor tyrosine kinases
Kari Salokas, Xiaonan Liu, Tiina Öhman, Iftekhar Chowdhury, Lisa Gawriyski, Salla Keskitalo, Markku Varjosalo
EMBO Rep. 2022 Jun; 23(6): e54041. Published online 2022 Apr 5. doi: 10.15252/embr.202154041
PMCID:
PMC9171411
AbstractArticlePDF–1.9M
3.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
4.
Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases
Marija Buljan, Rodolfo Ciuffa, Audrey van Drogen, Anton Vichalkovski, Martin Mehnert, George Rosenberger, Sohyon Lee, Markku Varjosalo, Lucia Espona Pernas, Vincent Spegg, Berend Snijder, Ruedi Aebersold, Matthias Gstaiger
Mol Cell. 2020 Aug 6; 79(3): 504–520.e9. doi: 10.1016/j.molcel.2020.07.001
PMCID:
PMC7427327
AbstractArticle
5.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
6.
Reduced statherin in acquired enamel pellicle on eroded teeth compared to healthy teeth in the same subjects: An in-vivo study
Mahdi Mutahar, Saoirse O’Toole, Guy Carpenter, David Bartlett, Manoharan Andiappan, Rebecca Moazzez
PLoS One. 2017; 12(8): e0183660. Published online 2017 Aug 24. doi: 10.1371/journal.pone.0183660
PMCID:
PMC5570300
AbstractArticlePDF–1.3M
7.
In Vitro Identification of Histatin 5 Salivary Complexes
Eduardo B. Moffa, Maria A. A. M. Machado, Maria C. M. Mussi, Yizhi Xiao, Saulo S. Garrido, Eunice T. Giampaolo, Walter L. Siqueira
PLoS One. 2015; 10(11): e0142517. Published online 2015 Nov 6. doi: 10.1371/journal.pone.0142517
PMCID:
PMC4636238
AbstractArticlePDF–539K
8.
CBFβ stabilizes HIV Vif to counteract APOBEC3 at the expense of RUNX1 target gene expression
Dong Young Kim, Eunju Kwon, Paul D. Hartley, David C. Crosby, Sumanjit Mann, Nevan J. Krogan, John D. Gross
Mol Cell. Author manuscript; available in PMC 2014 Feb 21.
Published in final edited form as: Mol Cell. 2013 Feb 21; 49(4): 632–644. Published online 2013 Jan 17. doi: 10.1016/j.molcel.2012.12.012
PMCID:
PMC3582769
AbstractArticlePDF–4.5M
9.
Direct Observation of Phenylalanine Orientations in Statherin Bound to Hydroxyapatite Surfaces
Tobias Weidner, Manish Dubey, Nicholas F. Breen, Jason Ash, J. E. Baio, Cherno Jaye, Daniel A. Fischer, Gary P. Drobny, David G. Castner
J Am Chem Soc. Author manuscript; available in PMC 2013 May 30.
Published in final edited form as: J Am Chem Soc. 2012 May 30; 134(21): 8750–8753. Published online 2012 May 18. doi: 10.1021/ja301711w
PMCID:
PMC3549518
AbstractArticlePDF–1.1M
10.
TRC40 can deliver short secretory proteins to the Sec61 translocon
Nicholas Johnson, Fabio Vilardi, Sven Lang, Pawel Leznicki, Richard Zimmermann, Stephen High
J Cell Sci. 2012 Aug 1; 125(15): 3612–3620. doi: 10.1242/jcs.102608
PMCID:
PMC3445324
AbstractArticle
11.
A 13C{31P} REDOR NMR Investigation of the Role of Glutamic Acid Residues in Statherin-Hydroxyapatite Recognition
Moise Ndao, Jason T. Ash, Nicholas F. Breen, Gil Goobes, Patrick S. Stayton, Gary P. Drobny
Langmuir. Author manuscript; available in PMC 2011 Dec 28.
Published in final edited form as: Langmuir. 2009 Oct 20; 25(20): 12136–12143. doi: 10.1021/la901647n
PMCID:
PMC3246581
AbstractArticlePDF–1.5M
12.
Mass Spectrometric Identification of Key Proteolytic Cleavage Sites in Statherin Affecting Mineral Homeostasis and Bacterial Binding Domains
Eva J. Helmerhorst, Georges Traboulsi, Erdjan Salih, Frank G. Oppenheim
J Proteome Res. Author manuscript; available in PMC 2011 Oct 1.
Published in final edited form as: J Proteome Res. 2010 Oct 1; 9(10): 5413–5421. doi: 10.1021/pr100653r
PMCID:
PMC2948583
AbstractArticlePDF–3.0M
13.
cDNA cloning and chromosomal localization (4q11-13) of a gene for statherin, a regulator of calcium in saliva.
L M Sabatini, L R Carlock, G W Johnson, E A Azen
Am J Hum Genet. 1987 Dec; 41(6): 1048–1060.
PMCID:
PMC1684366
SummaryPage BrowsePDF–1.6M
14.
A statherin and calcium enriched layer at the air interface of human parotid saliva
Gordon B. Proctor, Sawsan Hamdan, Guy H. Carpenter, Peter Wilde
Biochem J. 2005 Jul 1; 389(Pt 1): 111–116. Prepublished online 2005 Mar 16. Published online 2005 Jun 21. doi: 10.1042/BJ20042012
PMCID:
PMC1184543
AbstractArticlePDF–244K
15.
Large-scale purification and characterization of the major phosphoproteins and mucins of human submandibular-sublingual saliva.
N Ramasubbu, M S Reddy, E J Bergey, G G Haraszthy, S D Soni, M J Levine
Biochem J. 1991 Dec 1; 280(Pt 2): 341–352. doi: 10.1042/bj2800341
PMCID:
PMC1130552
SummaryPage BrowsePDF–2.8M
16.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
17.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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