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Items: 1 to 20 of 21

1.
Erythroid‐specific inactivation of Slc12a6/Kcc3 by EpoR promoter‐driven Cre expression reduces K‐Cl cotransport activity in mouse erythrocytes
Boris E. Shmukler, Alicia Rivera, Katherine Nishimura, Ann Hsu, Jay G. Wohlgemuth, Jeffrey S. Dlott, L. Michael Snyder, Carlo Brugnara, Seth L. Alper
Physiol Rep. 2022 Mar; 10(5): e15186. Published online 2022 Mar 11. doi: 10.14814/phy2.15186
PMCID:
PMC8915159
AbstractArticlePDF–1.1M
2.
Constitutive activation of canonical Wnt signaling disrupts choroid plexus epithelial fate
Arpan Parichha, Varun Suresh, Mallika Chatterjee, Aditya Kshirsagar, Lihi Ben-Reuven, Tsviya Olender, M. Mark Taketo, Velena Radosevic, Mihaela Bobic-Rasonja, Sara Trnski, Michael J. Holtzman, Nataša Jovanov-Milosevic, Orly Reiner, Shubha Tole
Nat Commun. 2022; 13: 633. Published online 2022 Feb 2. doi: 10.1038/s41467-021-27602-z
PMCID:
PMC8810795
AbstractArticlePDF–21M
3.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
4.
BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)
Kou Motani, Hidetaka Kosako
J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323
PMCID:
PMC7415991
AbstractArticlePDF–2.0M
5.
Interpreting an apoptotic corpse as anti-inflammatory involves a chloride sensing pathway
Justin S. A. Perry, Sho Morioka, Christopher B. Medina, J. Iker Etchegaray, Brady Barron, Michael H. Raymond, Christopher D. Lucas, Suna Onengut-Gumuscu, Eric Delpire, Kodi S. Ravichandran
Nat Cell Biol. Author manuscript; available in PMC 2020 Jun 2.
Published in final edited form as: Nat Cell Biol. 2019 Dec; 21(12): 1532–1543. Published online 2019 Dec 2. doi: 10.1038/s41556-019-0431-1
PMCID:
PMC7140761
AbstractArticlePDF–3.9M
6.
Genetic disruption of KCC cotransporters in a mouse model of thalassemia intermedia.
Boris E. Shmukler, Alicia Rivera, Parul Bhargava, Katherine Nishimura, Edward H. Kim, Ann Hsu, Jay G. Wohlgemuth, James Morton, L. Michael Snyder, Lucia De Franceschi, Marco B. Rust, Christian A. Hubner, Carlo Brugnara, Seth L. Alper
Blood Cells Mol Dis. Author manuscript; available in PMC 2021 Mar 1.
Published in final edited form as: Blood Cells Mol Dis. 2020 Mar; 81: 102389. Published online 2019 Nov 25. doi: 10.1016/j.bcmd.2019.102389
PMCID:
PMC7002294
AbstractArticlePDF–2.4M
7.
Combined genetic disruption of K-Cl cotransporters and Gardos channel KCNN4 rescues erythrocyte dehydration in the SAD mouse model of sickle cell disease.
Boris E. Shmukler, Alicia Rivera, Parul Bhargava, Katherine Nishimura, Ann Hsu, Edward H. Kim, Marie Trudel, Marco B. Rust, Christian A. Hubner, Carlo Brugnara, Seth L. Alper
Blood Cells Mol Dis. Author manuscript; available in PMC 2020 Nov 1.
Published in final edited form as: Blood Cells Mol Dis. 2019 Nov; 79: 102346. Published online 2019 Jul 17. doi: 10.1016/j.bcmd.2019.102346
Correction in:
Blood Cells Mol Dis. 2020 Jan 10; 81: 102390.
PMCID:
PMC6744291
AbstractArticlePDF–1.4M
8.
KCC1 Activation protects Mice from the Development of Experimental Cerebral Malaria
Elinor Hortle, Lora Starrs, Fiona C. Brown, Stephen M. Jane, David J. Curtis, Brendan J. McMorran, Simon J. Foote, Gaetan Burgio
Sci Rep. 2019; 9: 6356. Published online 2019 Apr 23. doi: 10.1038/s41598-019-42782-x
Correction in:
Sci Rep. 2020; 10: 2303.
PMCID:
PMC6478876
AbstractArticlePDF–2.0M
9.
The Zn2+-sensing receptor, ZnR/GPR39, upregulates colonocytic Cl− absorption, via basolateral KCC1, and reduces fluid loss
Laxmi Sunuwar, Hila Asraf, Mark Donowitz, Israel Sekler, Michal Hershfinkel
Biochim Biophys Acta. Author manuscript; available in PMC 2017 Aug 15.
Published in final edited form as: Biochim Biophys Acta. 2017 Apr; 1863(4): 947–960. Published online 2017 Jan 16. doi: 10.1016/j.bbadis.2017.01.009
PMCID:
PMC5557417
AbstractArticlePDF–2.8M
10.
Functional kinomics establishes a critical node of volume-sensitive cation-Cl− cotransporter regulation in the mammalian brain
Jinwei Zhang, Geng Gao, Gulnaz Begum, Jinhua Wang, Arjun R. Khanna, Boris E. Shmukler, Gerrit M. Daubner, Paola de los Heros, Paul Davies, Joby Varghese, Mohammad Iqbal H. Bhuiyan, Jinjing Duan, Jin Zhang, Daniel Duran, Seth L. Alper, Dandan Sun, Stephen J. Elledge, Dario R. Alessi, Kristopher T. Kahle
Sci Rep. 2016; 6: 35986. Published online 2016 Oct 26. doi: 10.1038/srep35986
PMCID:
PMC5080614
AbstractArticlePDF–2.9M
11.
Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration
Stephen Lumayag, Caroline E. Haldin, Nicola J. Corbett, Karl J. Wahlin, Colleen Cowan, Sanja Turturro, Peter E. Larsen, Beatrix Kovacs, P. Dane Witmer, David Valle, Donald J. Zack, Daniel A. Nicholson, Shunbin Xu
Proc Natl Acad Sci U S A. 2013 Feb 5; 110(6): E507–E516. Published online 2013 Jan 22. doi: 10.1073/pnas.1212655110
PMCID:
PMC3568372
AbstractArticlePDF–2.1M
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
K-Cl Cotransporter Gene Expression during Human and Murine Erythroid Differentiation
Dao Pan, Theodosia A. Kalfa, Daren Wang, Mary Risinger, Scott Crable, Anna Ottlinger, Sharat Chandra, David B. Mount, Christian A. Hübner, Robert S. Franco, Clinton H. Joiner
J Biol Chem. 2011 Sep 2; 286(35): 30492–30503. Published online 2011 Jul 6. doi: 10.1074/jbc.M110.206516
PMCID:
PMC3162409
AbstractArticlePDF–2.7M
14.
Chemical Crosslinking Studies with the Mouse Kcc1 K-Cl Cotransporter
Sabina Casula, Alexander S. Zolotarev, Alan K. Stuart-Tilley, Sabine Wilhelm, Boris E. Shmukler, Carlo Brugnara, Seth L. Alper
Blood Cells Mol Dis. Author manuscript; available in PMC 2010 May 1.
Published in final edited form as: Blood Cells Mol Dis. 2009 May–Jun; 42(3): 233–240. doi: 10.1016/j.bcmd.2009.01.021
PMCID:
PMC2797447
AbstractArticlePDF–1.8M
15.
Disruption of erythroid K-Cl cotransporters alters erythrocyte volume and partially rescues erythrocyte dehydration in SAD mice
Marco B. Rust, Seth L. Alper, York Rudhard, Boris E. Shmukler, Rubén Vicente, Carlo Brugnara, Marie Trudel, Thomas J. Jentsch, Christian A. Hübner
J Clin Invest. 2007 Jun 1; 117(6): 1708–1717. Published online 2007 May 17. doi: 10.1172/JCI30630
PMCID:
PMC1866252
AbstractArticlePDF–1.2M
16.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
17.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
18.
GenePaint.org: an atlas of gene expression patterns in the mouse embryo
Axel Visel, Christina Thaller, Gregor Eichele
Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029
PMCID:
PMC308763
AbstractArticlePDF–253K
19.
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells
Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin
Nucleic Acids Res. 2003 Jan 1; 31(1): 278–281. doi: 10.1093/nar/gkg064
PMCID:
PMC165511
AbstractArticlePDF–217K
20.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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