PMC Links for GEO Profiles (Select 70946229) - PMC

Alessandro Scacchetti, Tamas Schauer, Alexander Reim, Zivkos Apostolou, Aline Campos Sparr, Silke Krause, Patrick Heun, Michael Wierer, Peter B Becker

eLife. 2020; 9: e56325. Published online 2020 May 20. doi: 10.7554/eLife.56325

PMCID:: PMC7239659

Abstract Article PDF–2.2M

Select item 57078054.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890025.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 56797136.

A unique pH-dependent recognition of methylated histone H3K4 by PPS and DIDO

Adam H. Tencer, Jovylyn Gatchalian, Brianna J. Klein, Abid Khan, Yi Zhang, Brian D. Strahl, Karel H.M. van Wely, Tatiana G. Kutateladze

Structure. Author manuscript; available in PMC 2018 Oct 3.

Published in final edited form as: Structure. 2017 Oct 3; 25(10): 1530–1539.e3. Published online 2017 Sep 14. doi: 10.1016/j.str.2017.08.009

PMCID:: PMC5679713

Abstract Article PDF–1.8M

Select item 55592877.

EDEM function in ERAD protects against chronic ER proteinopathy and age-related physiological decline in Drosophila

Michiko Sekiya, Akiko Maruko-Otake, Stephen Hearn, Yasufumi Sakakibara, Naoki Fujisaki, Emiko Suzuki, Kanae Ando, Koichi M. Iijima

Dev Cell. Author manuscript; available in PMC 2018 Jun 19.

Published in final edited form as: Dev Cell. 2017 Jun 19; 41(6): 652–664.e5. doi: 10.1016/j.devcel.2017.05.019

PMCID:: PMC5559287

Abstract Article PDF–1.1M

Select item 54881618.

Promiscuity in post‐transcriptional control of gene expression: Drosophila sex‐lethal and its regulatory partnerships

Rebecca Moschall, Monika Gaik, Jan Medenbach

FEBS Lett. 2017 Jun; 591(11): 1471–1488. Published online 2017 Apr 28. doi: 10.1002/1873-3468.12652

PMCID:: PMC5488161

Abstract Article PDF–500K

Select item 53073599.

A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons

Shlesha Richhariya, Siddharth Jayakumar, Katharine Abruzzi, Michael Rosbash, Gaiti Hasan

Sci Rep. 2017; 7: 42586. Published online 2017 Feb 14. doi: 10.1038/srep42586

PMCID:: PMC5307359

Abstract Article PDF–2.1M

Select item 457717810.

spenito is required for sex determination in Drosophila melanogaster

Dong Yan, Norbert Perrimon

Proc Natl Acad Sci U S A. 2015 Sep 15; 112(37): 11606–11611. Published online 2015 Aug 31. doi: 10.1073/pnas.1515891112

PMCID:: PMC4577178

Abstract Article PDF–1.9M

Select item 456802511.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833012.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832913.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 439155514.

Identification of Genes That Promote or Inhibit Olfactory Memory Formation in Drosophila

Erica Walkinshaw, Yunchao Gai, Caitlin Farkas, Daniel Richter, Eric Nicholas, Krystyna Keleman, Ronald L. Davis

Genetics. 2015 Apr; 199(4): 1173–1182. Published online 2015 Feb 2. doi: 10.1534/genetics.114.173575

PMCID:: PMC4391555

Abstract Article PDF–1.1M

Select item 435288715.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 426505516.

Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase

Atsushi Fukuoh, Giuseppe Cannino, Mike Gerards, Suzanne Buckley, Selena Kazancioglu, Filippo Scialo, Eero Lihavainen, Andre Ribeiro, Eric Dufour, Howard T Jacobs

Mol Syst Biol. 2014 Jun 25; 10(6): 734. Published online 2014 Jul 1. doi: 10.15252/msb.20145117

PMCID:: PMC4265055

Abstract Article PDF–1.4M

Select item 369674617.

Landscape of protein–protein interactions in Drosophila immune deficiency signaling during bacterial challenge

Hidehiro Fukuyama, Yann Verdier, Yongsheng Guan, Chieko Makino-Okamura, Victoria Shilova, Xi Liu, Elie Maksoud, Jun Matsubayashi, Iman Haddad, Kerstin Spirohn, Kenichiro Ono, Charles Hetru, Jean Rossier, Trey Ideker, Michael Boutros, Joëlle Vinh, Jules A. Hoffmann

Proc Natl Acad Sci U S A. 2013 Jun 25; 110(26): 10717–10722. Published online 2013 Jun 7. doi: 10.1073/pnas.1304380110

PMCID:: PMC3696746

Abstract Article PDF–903K

Select item 353067718.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946719.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 331904820.

A Protein Complex Network of Drosophila melanogaster

K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas

Cell. Author manuscript; available in PMC 2012 Oct 28.

Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047

PMCID:: PMC3319048

Abstract Article PDF–3.2M

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