PMC Links for GEO Profiles (Select 70257972) - PMC

Lauren J. Hodkinson, Connor Smith, H. Skye Comstra, Bukola A. Ajani, Eric H. Albanese, Kawsar Arsalan, Alvaro Perez Daisson, Katherine B. Forrest, Elijah H. Fox, Matthew R. Guerette, Samia Khan, Madeleine P. Koenig, Shivani Lam, Ava S. Lewandowski, Lauren J. Mahoney, Nasserallah Manai, JonCarlo Miglay, Blake A. Miller, Olivia Milloway, Nhi Ngo, Vu D. Ngo, Nicole F. Oey, Tanya A. Punjani, HaoMin SiMa, Hollis Zeng, Casey A. Schmidt, Leila E. Rieder

BMC Genom Data. 2023; 24: 54. Published online 2023 Sep 21. doi: 10.1186/s12863-023-01147-0

PMCID:: PMC10515271

Abstract Article PDF–7.4M

Select item 78515964.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Ari Winbush, Nadia D Singh

Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252

PMCID:: PMC7851596

Abstract Article PDF–778K

Select item 76486485.

A single-cell atlas and lineage analysis of the adult Drosophila ovary

Katja Rust, Lauren E. Byrnes, Kevin Shengyang Yu, Jason S. Park, Julie B. Sneddon, Aaron D. Tward, Todd G. Nystul

Nat Commun. 2020; 11: 5628. Published online 2020 Nov 6. doi: 10.1038/s41467-020-19361-0

Correction in:: Nat Commun. 2021; 12: 5951.

PMCID:: PMC7648648

Abstract Article PDF–6.1M

Select item 69328906.

Identification of novel genes associated with longevity in Drosophila melanogaster - a computational approach

Bethany S. Hall, Yvonne A. Barnett, Jonathan J. Crofts, Nadia Chuzhanova

Aging (Albany NY) 2019 Dec 15; 11(23): 11244–11267. Published online 2019 Dec 3. doi: 10.18632/aging.102527

PMCID:: PMC6932890

Abstract Article PDF–1.2M

Select item 68932077.

An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster

Ben J. Vincent, Gavin R. Rice, Gabriella M. Wong, William J. Glassford, Kayla I. Downs, Jessica L. Shastay, Kenechukwu Charles-Obi, Malini Natarajan, Madelaine Gogol, Julia Zeitlinger, Mark Rebeiz

G3 (Bethesda) 2019 Dec; 9(12): 3961–3972. Published online 2019 Oct 16. doi: 10.1534/g3.119.400788

PMCID:: PMC6893207

Abstract Article PDF–2.1M

Select item 64859568.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 61772579.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

Select item 606323010.

Multiple Nonsense-Mediated mRNA Processes Require Smg5 in Drosophila

Jonathan O. Nelson, Dominique Förster, Kimberly A. Frizzell, Stefan Luschnig, Mark M. Metzstein

Genetics. 2018 Aug; 209(4): 1073–1084. Published online 2018 Jun 13. doi: 10.1534/genetics.118.301140

PMCID:: PMC6063230

Abstract Article PDF–1.2M

Select item 577196011.

Adult functions for the Drosophila DHR78 nuclear receptor

Stefanie Marxreiter, Carl S. Thummel

Dev Dyn. Author manuscript; available in PMC 2019 Feb 1.

Published in final edited form as: Dev Dyn. 2018 Feb; 247(2): 315–322. Published online 2017 Dec 12. doi: 10.1002/dvdy.24608

PMCID:: PMC5771960

Abstract Article PDF–1.7M

Select item 570780512.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900213.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 555000814.

The Drosophila Duox maturation factor is a key component of a positive feedback loop that sustains regeneration signaling

Sumbul Jawed Khan, Syeda Nayab Fatima Abidi, Andrea Skinner, Yuan Tian, Rachel K. Smith-Bolton

PLoS Genet. 2017 Jul; 13(7): e1006937. Published online 2017 Jul 28. doi: 10.1371/journal.pgen.1006937

PMCID:: PMC5550008

Abstract Article PDF–20M

Select item 524033415.

Snigdha Misra, Anuj Kumar Pandey, Snigdha Gupta, Ajay Kumar, Priyanka Khanna, Jai shankar, Kristipati Ravi Ram

Sci Rep. 2017; 7: 40372. Published online 2017 Jan 17. doi: 10.1038/srep40372

PMCID:: PMC5240334

Abstract Article PDF–2.6M

Select item 506896116.

Potential Direct Regulators of the Drosophila yellow Gene Identified by Yeast One-Hybrid and RNAi Screens

Gizem Kalay, Richard Lusk, Mackenzie Dome, Korneel Hens, Bart Deplancke, Patricia J. Wittkopp

G3 (Bethesda) 2016 Oct; 6(10): 3419–3430. Published online 2016 Aug 12. doi: 10.1534/g3.116.032607

PMCID:: PMC5068961

Abstract Article PDF–2.2M

Select item 484808917.

Degradation of Gadd45 mRNA by nonsense-mediated decay is essential for viability

Jonathan O Nelson, Kristin A Moore, Alex Chapin, Julie Hollien, Mark M Metzstein

eLife. 2016; 5: e12876. Published online 2016 Mar 8. doi: 10.7554/eLife.12876

PMCID:: PMC4848089

Abstract Article PDF–1.4M

Select item 473800518.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 452833019.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832920.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

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