PMC Links for GEO Profiles (Select 69285642) - PMC

Select item 67426461.

Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations

Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu

Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3

PMCID:: PMC6742646

Abstract Article PDF–1.2M

Select item 45316092.

Circadian Rhythm of Surfactant Protein A, B and C mRNA in Rats

Chung Mi Kim, Jang Won Sohn, Ho Joo Yoon, Dong Ho Shin, Sung Soo Park

Korean J Intern Med. 2003 Jun; 18(2): 76–82. doi: 10.3904/kjim.2003.18.2.76

PMCID:: PMC4531609

Abstract Article PDF–6.3M

Select item 44412153.

Widespread Macromolecular Interaction Perturbations in Human Genetic Disorders

Nidhi Sahni, Song Yi, Mikko Taipale, Juan I. Fuxman Bass, Jasmin Coulombe-Huntington, Fan Yang, Jian Peng, Jochen Weile, Georgios I. Karras, Yang Wang, István A. Kovács, Atanas Kamburov, Irina Krykbaeva, Mandy H. Lam, George Tucker, Vikram Khurana, Amitabh Sharma, Yang-Yu Liu, Nozomu Yachie, Quan Zhong, Yun Shen, Alexandre Palagi, Adriana San-Miguel, Changyu Fan, Dawit Balcha, Amelie Dricot, Daniel M. Jordan, Jennifer M. Walsh, Akash A. Shah, Xinping Yang, Ani Stoyanova, Alex Leighton, Michael A. Calderwood, Yves Jacob, Michael E. Cusick, Kourosh Salehi-Ashtiani, Luke J. Whitesell, Shamil Sunyaev, Bonnie Berger, Albert-László Barabási, Benoit Charloteaux, David E. Hill, Tong Hao, Frederick P. Roth, Yu Xia, Albertha J.M. Walhout, Susan Lindquist, Marc Vidal

Cell. Author manuscript; available in PMC 2016 Apr 23.

Published in final edited form as: Cell. 2015 Apr 23; 161(3): 647–660. doi: 10.1016/j.cell.2015.04.013

PMCID:: PMC4441215

Abstract Article PDF–1.2M

Select item 43443184.

Macrophage Dysfunction and Susceptibility to Pulmonary Pseudomonas aeruginosa Infection in Surfactant Protein C-Deficient Mice

Stephan W. Glasser, Albert P. Senft, Jeffrey A. Whitsett, Melissa D. Maxfield, Gary F. Ross, Theresa R. Richardson, Daniel R. Prows, Yan Xu, Thomas R. Korfhagen

J Immunol. Author manuscript; available in PMC 2015 Feb 27.

Published in final edited form as: J Immunol. 2008 Jul 1; 181(1): 621–628. doi: 10.4049/jimmunol.181.1.621

PMCID:: PMC4344318

Abstract Article PDF–1.1M

Select item 42665885.

A proteome-scale map of the human interactome network

Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal

Cell. Author manuscript; available in PMC 2015 Nov 20.

Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050

PMCID:: PMC4266588

Abstract Article PDF–3.1M

Select item 38397466.

Sox9 plays multiple roles in the lung epithelium during branching morphogenesis

Briana E. Rockich, Steven M. Hrycaj, Hung Ping Shih, Melinda S. Nagy, Michael A. H. Ferguson, Janel L. Kopp, Maike Sander, Deneen M. Wellik, Jason R. Spence

Proc Natl Acad Sci U S A. 2013 Nov 19; 110(47): E4456–E4464. Published online 2013 Nov 4. doi: 10.1073/pnas.1311847110

PMCID:: PMC3839746

Abstract Article PDF–2.8M

Select item 31780597.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 31755818.

Role of Endoplasmic Reticulum Stress in Epithelial–Mesenchymal Transition of Alveolar Epithelial Cells: Effects of Misfolded Surfactant Protein

Qian Zhong, Beiyun Zhou, David K. Ann, Parviz Minoo, Yixin Liu, Agnes Banfalvi, Manda S. Krishnaveni, Mickael Dubourd, Lucas Demaio, Brigham C. Willis, Kwang-Jin Kim, Roland M. duBois, Edward D. Crandall, Michael F. Beers, Zea Borok

Am J Respir Cell Mol Biol. 2011 Sep; 45(3): 498–509. Published online 2010 Dec 17. doi: 10.1165/rcmb.2010-0347OC

PMCID:: PMC3175581

Abstract Article PDF–2.1M

Select item 27153029.

Defective Surfactant Secretion in a Mouse Model of Hermansky-Pudlak Syndrome

Susan H. Guttentag, Amana Akhtar, Jian-Qin Tao, Elena Atochina, Michael E. Rusiniak, Richard T. Swank, Sandra R. Bates

Am J Respir Cell Mol Biol. 2005 Jul; 33(1): 14–21. Published online 2005 Mar 24. doi: 10.1165/rcmb.2004-0293OC

PMCID:: PMC2715302

Abstract Article PDF–412K

Select item 271181610.

Surfactant protein C-deficient mice are susceptible to respiratory syncytial virus infection

Stephan W. Glasser, Teah L. Witt, Albert P. Senft, John E. Baatz, Dusti Folger, Melissa D. Maxfield, Henry T. Akinbi, Danforth A. Newton, Daniel R. Prows, Thomas R. Korfhagen

Am J Physiol Lung Cell Mol Physiol. 2009 Jul; 297(1): L64–L72. Published online 2009 Mar 20. doi: 10.1152/ajplung.90640.2008

PMCID:: PMC2711816

Abstract Article

Select item 264327911.

Heparin and Fibroblast Growth Factors Affect Surfactant Protein Gene Expression in Type II Cells

Kevin A. Leiner, Donna Newman, Cheng-Ming Li, Eric Walsh, Jody Khosla, Philip L. Sannes

Am J Respir Cell Mol Biol. 2006 Nov; 35(5): 611–618. Published online 2006 Jun 22. doi: 10.1165/rcmb.2006-0159OC

PMCID:: PMC2643279

Abstract Article PDF–550K

Select item 239625212.

Foxp2 Inhibits Nkx2.1-Mediated Transcription of SP-C via Interactions with the Nkx2.1 Homeodomain

Beiyun Zhou, Qian Zhong, Parviz Minoo, Changgong Li, David K. Ann, Baruch Frenkel, Edward E. Morrisey, Edward D. Crandall, Zea Borok

Am J Respir Cell Mol Biol. 2008 Jun; 38(6): 750–758. Published online 2008 Jan 31. doi: 10.1165/rcmb.2007-0350OC

PMCID:: PMC2396252

Abstract Article PDF–585K

Select item 195050613.

Time-dependent changes in pulmonary surfactant function and composition in acute respiratory distress syndrome due to pneumonia or aspiration

Reinhold Schmidt, Philipp Markart, Clemens Ruppert, Malgorzata Wygrecka, Tim Kuchenbuch, Dieter Walmrath, Werner Seeger, Andreas Guenther

Respir Res. 2007; 8(1): 55. Published online 2007 Jul 27. doi: 10.1186/1465-9921-8-55

PMCID:: PMC1950506

Abstract Article PDF–395K

Select item 160379014.

Increased and Prolonged Pulmonary Fibrosis in Surfactant Protein C-Deficient Mice Following Intratracheal Bleomycin

William E. Lawson, Vasiliy V. Polosukhin, Georgios T. Stathopoulos, Ornella Zoia, Wei Han, Kirk B. Lane, Bo Li, Edwin F. Donnelly, George E. Holburn, Kenneth G. Lewis, Robert D. Collins, William M. Hull, Stephan W. Glasser, Jeffrey A. Whitsett, Timothy S. Blackwell

Am J Pathol. 2005 Nov; 167(5): 1267–1277. doi: 10.1016/S0002-9440(10)61214-X