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Items: 15

1.
An IL-27-Driven Transcriptional Network Identifies Regulators of IL-10 Expression across T Helper Cell Subsets
Huiyuan Zhang, Asaf Madi, Nir Yosef, Norio Chihara, Amit Awasthi, Caroline Pot, Conner Lambden, Amitabh Srivastava, Patrick R. Burkett, Jackson Nyman, Elena Christian, Yasaman Etminan, Annika Lee, Helene Stroh, Junrong Xia, Katarzyna Karwacz, Pratiksha I. Thakore, Nandini Acharya, Alexandra Schnell, Chao Wang, Lionel Apetoh, Orit Rozenblatt-Rosen, Ana C. Anderson, Aviv Regev, Vijay K. Kuchroo
Cell Rep. Author manuscript; available in PMC 2020 Dec 29.
Published in final edited form as: Cell Rep. 2020 Nov 24; 33(8): 108433. doi: 10.1016/j.celrep.2020.108433
PMCID:
PMC7771052
AbstractArticlePDF–2.9M
2.
Transcription factor Hlx controls a systematic switch from white to brown fat through Prdm16-mediated co-activation
Lei Huang, Dongning Pan, Qingbo Chen, Lihua J. Zhu, Jianhong Ou, Martin Wabitsch, Yong-Xu Wang
Nat Commun. 2017; 8: 68. Published online 2017 Jul 12. doi: 10.1038/s41467-017-00098-2
PMCID:
PMC5507986
AbstractArticlePDF–3.1M
3.
A high resolution spatiotemporal atlas of gene expression of the developing mouse brain
Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones
Neuron. Author manuscript; available in PMC 2015 Jul 16.
Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033
PMCID:
PMC4319559
AbstractArticlePDF–3.0M
4.
Abnormal Wnt and PI3Kinase Signaling in the Malformed Intestine of lama5 Deficient Mice
Léa Ritié, Caroline Spenlé, Joël Lacroute, Anne-Laure Bolcato-Bellemin, Olivier Lefebvre, Christine Bole-Feysot, Bernard Jost, Annick Klein, Christiane Arnold, Michèle Kedinger, Dominique Bagnard, Gertraud Orend, Patricia Simon-Assmann
PLoS One. 2012; 7(5): e37710. Published online 2012 May 30. doi: 10.1371/journal.pone.0037710
PMCID:
PMC3364287
AbstractArticlePDF–5.2M
5.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
6.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
7.
Dlx1&2 and Mash1 Transcription Factors Control MGE and CGE Patterning and Differentiation through Parallel and Overlapping Pathways
Jason E. Long, Inma Cobos, Greg B. Potter, John L. R. Rubenstein
Cereb Cortex. 2009 Jul; 19(Suppl 1): i96–i106. Published online 2009 Apr 22. doi: 10.1093/cercor/bhp045
PMCID:
PMC2693539
AbstractArticlePDF–838K
8.
Hlx homeobox transcription factor negatively regulates interferon-γ production in monokine-activated natural killer cells
Brian Becknell, Tiffany L. Hughes, Aharon G. Freud, Bradley W. Blaser, Jianhua Yu, Rossana Trotta, Hsiaoyin C. Mao, Marie L. Caligiuri de Jesús, Mohamad Alghothani, Don M. Benson, Jr, Amy Lehman, David Jarjoura, Danilo Perrotti, Michael D. Bates, Michael A. Caligiuri
Blood. 2007 Mar 15; 109(6): 2481–2487. Prepublished online 2006 Nov 16. doi: 10.1182/blood-2006-10-050096
PMCID:
PMC1852195
AbstractArticle
9.
The Hlx homeobox transcription factor is required early in enteric nervous system development
Michael D Bates, Dana T Dunagan, Lynn C Welch, Ajay Kaul, Richard P Harvey
BMC Dev Biol. 2006; 6: 33. Published online 2006 Jul 19. doi: 10.1186/1471-213X-6-33
PMCID:
PMC1564389
AbstractArticlePDF–1.3M
10.
BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System
Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran
PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086
PMCID:
PMC1413568
ArticlePDF–99K
11.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
12.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
13.
Expression specificity of the mouse exonuclease 1 (mExo1) gene.
B I Lee, M Shannon, L Stubbs, D M Wilson, 3rd
Nucleic Acids Res. 1999 Oct 15; 27(20): 4114–4120. doi: 10.1093/nar/27.20.4114
PMCID:
PMC148681
SummaryPDF–448K
14.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
15.
Detection of homeobox genes in development and evolution.
M T Murtha, J F Leckman, F H Ruddle
Proc Natl Acad Sci U S A. 1991 Dec 1; 88(23): 10711–10715. doi: 10.1073/pnas.88.23.10711
PMCID:
PMC53000
SummaryPage BrowsePDF–1.0M

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