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Items: 1 to 20 of 29

1.
Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1–CoREST interactome during embryonic stem cell differentiation
Claire E. Barnes, David M. English, Megan Broderick, Mark O. Collins, Shaun M. Cowley
Mol Omics. 2022 Jan 17; 18(1): 31–44. Published online 2021 Oct 14. doi: 10.1039/d1mo00236h
PMCID:
PMC8763317
AbstractArticle
2.
Testicular receptor 2, Nr2c1, is associated with stem cells in the developing olfactory epithelium and other cranial sensory and skeletal structures
Jennifer L. Baker, Bernard Wood, Beverly A. Karpinski, Anthony-S. LaMantia, Thomas M. Maynard
Gene Expr Patterns. Author manuscript; available in PMC 2017 Jan 1.
Published in final edited form as: Gene Expr Patterns. 2016 Jan; 20(1): 71–79. Published online 2015 Dec 19. doi: 10.1016/j.gep.2015.12.002
PMCID:
PMC4858322
AbstractArticlePDF–1.0M
3.
Compound loss of function of nuclear receptors Tr2 and Tr4 leads to induction of murine embryonic β-type globin genes
Shuaiying Cui, Osamu Tanabe, Michael Sierant, Lihong Shi, Andrew Campbell, Kim-Chew Lim, James Douglas Engel
Blood. 2015 Feb 26; 125(9): 1477–1487. Prepublished online 2015 Jan 5. doi: 10.1182/blood-2014-10-605022
PMCID:
PMC4342359
AbstractArticle
4.
A high resolution spatiotemporal atlas of gene expression of the developing mouse brain
Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones
Neuron. Author manuscript; available in PMC 2015 Jul 16.
Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033
PMCID:
PMC4319559
AbstractArticlePDF–3.0M
5.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
6.
A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract
Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith
Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130
PMCID:
PMC3439845
AbstractArticlePDF–1.4M
7.
8/1/2010
Biol Reprod. 2010 Nov; 83(1 Suppl): 3. doi: 10.1095/biolreprod.110.083824
PMCID:
PMC3399412
Article
8.
Forced TR2/TR4 expression in sickle cell disease mice confers enhanced fetal hemoglobin synthesis and alleviated disease phenotypes
Andrew D. Campbell, Shuaiying Cui, Lihong Shi, Rebekah Urbonya, Andrea Mathias, Kori Bradley, Kwaku O. Bonsu, Rhonda R. Douglas, Brittne Halford, Lindsay Schmidt, David Harro, Donald Giacherio, Keiji Tanimoto, Osamu Tanabe, James Douglas Engel
Proc Natl Acad Sci U S A. 2011 Nov 15; 108(46): 18808–18813. Published online 2011 Oct 31. doi: 10.1073/pnas.1104964108
PMCID:
PMC3219144
AbstractArticlePDF–696K
9.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
10.
Nuclear Receptors TR2 and TR4 Recruit Multiple Epigenetic Transcriptional Corepressors That Associate Specifically with the Embryonic β-Type Globin Promoters in Differentiated Adult Erythroid Cells
Shuaiying Cui, Katarzyna E. Kolodziej, Naoshi Obara, Alexandra Amaral-Psarris, Jeroen Demmers, Lihong Shi, James Douglas Engel, Frank Grosveld, John Strouboulis, Osamu Tanabe
Mol Cell Biol. 2011 Aug; 31(16): 3298–3311. doi: 10.1128/MCB.05310-11
PMCID:
PMC3147791
AbstractArticlePDF–2.2M
11.
Genetic Variations Strongly Influence Phenotypic Outcome in the Mouse Retina
Austin S. Jelcick, Yang Yuan, Barrett D. Leehy, Lakeisha C. Cox, Alexandra C. Silveira, Fang Qiu, Sarah Schenk, Andrew J. Sachs, Margaux A. Morrison, Arne M. Nystuen, Margaret M. DeAngelis, Neena B. Haider
PLoS One. 2011; 6(7): e21858. Published online 2011 Jul 14. doi: 10.1371/journal.pone.0021858
Correction in:
PLoS One. 2011; 6(10): 10.1371/annotation/f375292d-9fc7-4e3c-9dc7-af0aee76fa15.
PMCID:
PMC3136482
AbstractArticlePDF–1.4M
12.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
13.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
14.
HDAC3 as a Molecular Chaperone for Shuttling Phosphorylated TR2 to PML: A Novel Deacetylase Activity-Independent Function of HDAC3
Pawan Gupta, Ping-Chih Ho, Sung Gil Ha, Yi-Wei Lin, Li-Na Wei
PLoS One. 2009; 4(2): e4363. Published online 2009 Feb 10. doi: 10.1371/journal.pone.0004363
PMCID:
PMC2634961
AbstractArticlePDF–424K
15.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
16.
Retinoic acid-stimulated sequential phosphorylation, PML recruitment, and SUMOylation of nuclear receptor TR2 to suppress Oct4 expression
Pawan Gupta, Ping-Chih Ho, MD Mostaqul Huq, Sung Gil Ha, Sung Wook Park, Amjad Ali Khan, Nien-Pei Tsai, Li-Na Wei
Proc Natl Acad Sci U S A. 2008 Aug 12; 105(32): 11424–11429. Published online 2008 Aug 5. doi: 10.1073/pnas.0710561105
PMCID:
PMC2516243
AbstractArticlePDF–1.0M
17.
The TR2 and TR4 orphan nuclear receptors repress Gata1 transcription
Osamu Tanabe, Yannan Shen, Qinghui Liu, Andrew D. Campbell, Takashi Kuroha, Masayuki Yamamoto, James Douglas Engel
Genes Dev. 2007 Nov 1; 21(21): 2832–2844. doi: 10.1101/gad.1593307
PMCID:
PMC2045135
AbstractArticlePDF–633K
18.
Orphan nuclear receptor TR2, a mediator of preadipocyte proliferation, is differentially regulated by RA through exchange of coactivator PCAF with corepressor RIP140 on a platform molecule GRIP1
Pawan Gupta, Sung Wook Park, Mariya Farooqui, L.-N. Wei
Nucleic Acids Res. 2007 Apr; 35(7): 2269–2282. Published online 2007 Mar 27. doi: 10.1093/nar/gkl1147
PMCID:
PMC1874640
AbstractArticlePDF–4.5M
19.
Embryonic and fetal β-globin gene repression by the orphan nuclear receptors, TR2 and TR4
Osamu Tanabe, David McPhee, Shoko Kobayashi, Yannan Shen, William Brandt, Xia Jiang, Andrew D Campbell, Yei-Tsung Chen, Chawn shang Chang, Masayuki Yamamoto, Keiji Tanimoto, James Douglas Engel
EMBO J. 2007 May 2; 26(9): 2295–2306. Published online 2007 Apr 12. doi: 10.1038/sj.emboj.7601676
PMCID:
PMC1864974
AbstractArticlePDF–595K
20.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K

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