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Links from GEO Profiles

Items: 19

1.
Identification of Novel Vascular Genes Downstream of Islet2 and Nr2f1b Transcription Factors
Ru-Fang Li, Yi-Shan Wang, Fu-I Lu, Yi-Shan Huang, Chien-Chih Chiu, Ming-Hong Tai, Chang-Yi Wu
Biomedicines. 2022 Jun; 10(6): 1261. Published online 2022 May 27. doi: 10.3390/biomedicines10061261
PMCID:
PMC9220758
AbstractArticlePDF–5.4M
2.
Induction of Wnt signaling antagonists and p21-activated kinase enhances cardiomyocyte proliferation during zebrafish heart regeneration
Xiangwen Peng, Kaa Seng Lai, Peilu She, Junsu Kang, Tingting Wang, Guobao Li, Yating Zhou, Jianjian Sun, Daqing Jin, Xiaolei Xu, Lujian Liao, Jiandong Liu, Ethan Lee, Kenneth D Poss, Tao P Zhong
J Mol Cell Biol. 2021 Jan; 13(1): 41–58. Published online 2020 Sep 16. doi: 10.1093/jmcb/mjaa046
Correction in:
J Mol Cell Biol. 2021 Dec; 13(12): 921.
PMCID:
PMC8035995
AbstractArticlePDF–1.8M
3.
Hox13 genes are required for mesoderm formation and axis elongation during early zebrafish development
Zhi Ye, David Kimelman
Development. 2020 Nov 15; 147(22): dev185298. Published online 2020 Nov 27. doi: 10.1242/dev.185298
PMCID:
PMC7710019
AbstractArticle
4.
Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores
Victor M. Lewis, Lauren M. Saunders, Tracy A. Larson, Emily J. Bain, Samantha L. Sturiale, Dvir Gur, Sarwat Chowdhury, Jessica D. Flynn, Michael C. Allen, Dimitri D. Deheyn, Jennifer C. Lee, Julian A. Simon, Jennifer Lippincott-Schwartz, David W. Raible, David M. Parichy
Proc Natl Acad Sci U S A. 2019 Jun 11; 116(24): 11806–11811. Published online 2019 May 28. doi: 10.1073/pnas.1901021116
PMCID:
PMC6575160
AbstractArticlePDF–1.4M
5.
Distinct progenitor populations mediate regeneration in the zebrafish lateral line
Eric D Thomas, David W Raible
eLife. 2019; 8: e43736. Published online 2019 Mar 5. doi: 10.7554/eLife.43736
PMCID:
PMC6433462
AbstractArticlePDF–4.6M
6.
The Surface Proteome of Adult Neural Stem Cells in Zebrafish Unveils Long-Range Cell-Cell Connections and Age-Related Changes in Responsiveness to IGF
Jara Obermann, Felicia Wagner, Anita Kociaj, Alessandro Zambusi, Jovica Ninkovic, Stefanie M. Hauck, Prisca Chapouton
Stem Cell Reports. 2019 Feb 12; 12(2): 258–273. Published online 2019 Jan 10. doi: 10.1016/j.stemcr.2018.12.005
PMCID:
PMC6373494
AbstractArticlePDF–5.7M
7.
scRNA-Seq reveals distinct stem cell populations that drive hair cell regeneration after loss of Fgf and Notch signaling
Mark E Lush, Daniel C Diaz, Nina Koenecke, Sungmin Baek, Helena Boldt, Madeleine K St Peter, Tatiana Gaitan-Escudero, Andres Romero-Carvajal, Elisabeth M Busch-Nentwich, Anoja G Perera, Kathryn E Hall, Allison Peak, Jeffrey S Haug, Tatjana Piotrowski
eLife. 2019; 8: e44431. Published online 2019 Jan 25. doi: 10.7554/eLife.44431
PMCID:
PMC6363392
AbstractArticlePDF–11M
8.
Identification of Dmrt2a downstream genes during zebrafish early development using a timely controlled approach
Rita Alexandra Pinto, José Almeida-Santos, Raquel Lourenço, Leonor Saúde
BMC Dev Biol. 2018; 18: 14. Published online 2018 Jun 19. doi: 10.1186/s12861-018-0173-5
PMCID:
PMC6006574
AbstractArticlePDF–3.7M
9.
Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish
Jeremy S. Rabinowitz, Aaron M. Robitaille, Yuliang Wang, Catherine A. Ray, Ryan Thummel, Haiwei Gu, Danijel Djukovic, Daniel Raftery, Jason D. Berndt, Randall T. Moon
Proc Natl Acad Sci U S A. 2017 Jan 31; 114(5): E717–E726. Published online 2017 Jan 17. doi: 10.1073/pnas.1620755114
PMCID:
PMC5293114
AbstractArticlePDF–1.1M
10.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe
BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z
PMCID:
PMC4870732
AbstractArticlePDF–1.8M
11.
Investigation of the effects of estrogen on skeletal gene expression during zebrafish larval head development
Ehsan Pashay Ahi, Benjamin S. Walker, Christopher S. Lassiter, Zophonías O. Jónsson
PeerJ. 2016; 4: e1878. Published online 2016 Mar 31. doi: 10.7717/peerj.1878
PMCID:
PMC4824909
AbstractArticlePDF–1.5M
12.
RFX transcription factors are essential for hearing in mice
Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano
Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549
PMCID:
PMC4634137
AbstractArticlePDF–5.5M
13.
Retinoic Acid Signaling Regulates Differential Expression of the Tandemly-Duplicated Long Wavelength-Sensitive Cone Opsin Genes in Zebrafish
Diana M. Mitchell, Craig B. Stevens, Ruth A. Frey, Samuel S. Hunter, Ryuichi Ashino, Shoji Kawamura, Deborah L. Stenkamp
PLoS Genet. 2015 Aug; 11(8): e1005483. Published online 2015 Aug 21. doi: 10.1371/journal.pgen.1005483
PMCID:
PMC4546582
AbstractArticlePDF–19M
14.
ErbB expressing Schwann cells control lateral line progenitor cells via non-cell-autonomous regulation of Wnt/β-catenin
Mark E Lush, Tatjana Piotrowski
eLife. 2014; 3: e01832. Published online 2014 Mar 18. doi: 10.7554/eLife.01832
PMCID:
PMC3957165
AbstractArticlePDF–6.8M
15.
Ascl1a/Dkk/β-catenin signaling pathway is necessary and glycogen synthase kinase-3β inhibition is sufficient for zebrafish retina regeneration
Rajesh Ramachandran, Xiao-Feng Zhao, Daniel Goldman
Proc Natl Acad Sci U S A. 2011 Sep 20; 108(38): 15858–15863. Published online 2011 Sep 12. doi: 10.1073/pnas.1107220108
PMCID:
PMC3179085
AbstractArticlePDF–1.1M
16.
Identification and mechanism of regulation of the zebrafish dorsal determinant
Fu-I Lu, Christine Thisse, Bernard Thisse
Proc Natl Acad Sci U S A. 2011 Sep 20; 108(38): 15876–15880. Published online 2011 Sep 12. doi: 10.1073/pnas.1106801108
PMCID:
PMC3179059
AbstractArticlePDF–609K
17.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
18.
Bmp inhibition is necessary for post-gastrulation patterning and morphogenesis of the zebrafish tailbud
Richard Row, David Kimelman
Dev Biol. Author manuscript; available in PMC 2010 May 1.
Published in final edited form as: Dev Biol. 2009 May 1; 329(1): 55–63. Published online 2009 Feb 21. doi: 10.1016/j.ydbio.2009.02.016
PMCID:
PMC2670352
AbstractArticlePDF–992K
19.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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