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Items: 1 to 20 of 22

1.
COL11A2 as a candidate gene for vertebral malformations and congenital scoliosis
Denise Rebello, Elizabeth Wohler, Vida Erfani, Guozhuang Li, Alexya N Aguilera, Alberto Santiago-Cornier, Sen Zhao, Steven W Hwang, Robert D Steiner, Terry Jianguo Zhang, Christina A Gurnett, Cathleen Raggio, Nan Wu, Nara Sobreira, Philip F Giampietro, Brian Ciruna
Hum Mol Genet. 2023 Oct 1; 32(19): 2913–2928. Published online 2023 Jul 18. doi: 10.1093/hmg/ddad117
PMCID:
PMC10508038
AbstractArticlePDF–3.0M
2.
Cisplatin alkylating activity in zebrafish causes resistance to chorionic degradation and inhibition of osteogenesis
Brittany F. Karas, Jordan M. Hotz, Brian T. Buckley, Keith R. Cooper
Aquat Toxicol. Author manuscript; available in PMC 2022 Jun 21.
Published in final edited form as: Aquat Toxicol. 2020 Dec; 229: 105656. Published online 2020 Oct 13. doi: 10.1016/j.aquatox.2020.105656
PMCID:
PMC9210937
AbstractArticlePDF–699K
3.
NTR 2.0: a rationally-engineered prodrug converting enzyme with substantially enhanced efficacy for targeted cell ablation
Abigail V. Sharrock, Timothy S. Mulligan, Kelsi R. Hall, Elsie M. Williams, David T. White, Liyun Zhang, Kevin Emmerich, Frazer Matthews, Saumya Nimmagadda, Selena Washington, Katherine D. Le, Danielle Meir-Levi, Olivia L. Cox, Meera T. Saxena, Anne L. Calof, Martha E. Lopez-Burks, Arthur D. Lander, Ding Ding, Hongkai Ji, David F. Ackerley, Jeff S. Mumm
Nat Methods. Author manuscript; available in PMC 2022 Aug 7.
Published in final edited form as: Nat Methods. 2022 Feb; 19(2): 205–215. Published online 2022 Feb 7. doi: 10.1038/s41592-021-01364-4
PMCID:
PMC8851868
AbstractArticlePDF–4.0M
4.
The Kunitz-type serine protease inhibitor Spint2 is required for cellular cohesion, coordinated cell migration and cell survival during zebrafish hatching gland development
Julia Hatzold, Heike Wessendorf, Hans-Martin Pogoda, Wilhelm Bloch, Matthias Hammerschmidt
Dev Biol. Author manuscript; available in PMC 2022 Aug 1.
Published in final edited form as: Dev Biol. 2021 Aug; 476: 148–170. Published online 2021 Apr 4. doi: 10.1016/j.ydbio.2021.03.017
PMCID:
PMC8820232
AbstractArticlePDF–3.7M
5.
Specialized neurons in the right habenula mediate response to aversive olfactory cues
Jung-Hwa Choi, Erik R Duboue, Michelle Macurak, Jean-Michel Chanchu, Marnie E Halpern
eLife. 2021; 10: e72345. Published online 2021 Dec 8. doi: 10.7554/eLife.72345
PMCID:
PMC8691842
AbstractArticlePDF–9.1M
6.
The seahorse genome and the evolution of its specialized morphology
Qiang Lin, Shaohua Fan, Yanhong Zhang, Meng Xu, Huixian Zhang, Yulan Yang, Alison P. Lee, Joost M. Woltering, Vydianathan Ravi, Helen M. Gunter, Wei Luo, Zexia Gao, Zhi Wei Lim, Geng Qin, Ralf F. Schneider, Xin Wang, Peiwen Xiong, Gang Li, Kai Wang, Jiumeng Min, Chi Zhang, Ying Qiu, Jie Bai, Weiming He, Chao Bian, Xinhui Zhang, Dai Shan, Hongyue Qu, Ying Sun, Qiang Gao, Liangmin Huang, Qiong Shi, Axel Meyer, Byrappa Venkatesh
Nature. 2016; 540(7633): 395–399. Published online 2016 Dec 14. doi: 10.1038/nature20595
PMCID:
PMC8127814
AbstractArticlePDF–2.7M
7.
Biological Activity of Porcine Gastric Mucin on Stress Resistance and Immunomodulation
Thiloma D. Liyanage, Pasan S. Dahanayake, Shan L. Edirisinghe, Chamilani Nikapitiya, Gang-Joon Heo, Mahanama De Zoysa, Ilson Whang
Molecules. 2020 Jul; 25(13): 2981. Published online 2020 Jun 29. doi: 10.3390/molecules25132981
PMCID:
PMC7411864
AbstractArticlePDF–2.6M
8.
Characterization of biklf/klf17-deficient zebrafish in posterior lateral line neuromast and hatching gland development
Hiroaki Suzuki, Tomoe Ishizaka, Kanoko Yanagi, Ryota Sone, Yuto Sunaga, Rie Ohga, Atsuo Kawahara
Sci Rep. 2019; 9: 13680. Published online 2019 Sep 26. doi: 10.1038/s41598-019-50149-5
PMCID:
PMC6763433
AbstractArticlePDF–1.7M
9.
Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis
Jeffrey A. Farrell, Yiqun Wang, Samantha J. Riesenfeld, Karthik Shekhar, Aviv Regev, Alexander F. Schier
Science. Author manuscript; available in PMC 2018 Dec 1.
Published in final edited form as: Science. 2018 Jun 1; 360(6392): eaar3131. Published online 2018 Apr 26. doi: 10.1126/science.aar3131
PMCID:
PMC6247916
AbstractArticlePDF–1.8M
10.
Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo
Daniel E. Wagner, Caleb Weinreb, Zach M. Collins, James A. Briggs, Sean G. Megason, Allon M. Klein
Science. Author manuscript; available in PMC 2018 Aug 9.
Published in final edited form as: Science. 2018 Jun 1; 360(6392): 981–987. Published online 2018 Apr 26. doi: 10.1126/science.aar4362
PMCID:
PMC6083445
AbstractArticlePDF–2.5M
11.
Mechanistic insight to ROS and Apoptosis regulated cytotoxicity inferred by Green synthesized CuO nanoparticles from Calotropis gigantea to Embryonic Zebrafish
Puja Kumari, Pritam Kumar Panda, Ealisha Jha, Khushboo Kumari, Kumari Nisha, M. Anwar Mallick, Suresh K. Verma
Sci Rep. 2017; 7: 16284. Published online 2017 Nov 24. doi: 10.1038/s41598-017-16581-1
PMCID:
PMC5701131
AbstractArticlePDF–4.1M
12.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe
BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z
PMCID:
PMC4870732
AbstractArticlePDF–1.8M
13.
Decreased Dissolution of ZnO by Iron Doping Yields Nanoparticles with Reduced Toxicity in the Rodent Lung and Zebrafish Embryos
Tian Xia, Yan Zhao, Tina Sager, Saji George, Suman Pokhrel, Ning Li, David Schoenfeld, Huan Meng, Sijie Lin, Xiang Wang, Meiying Wang, Zhaoxia Ji, Jeffrey I. Zink, Lutz Mädler, Vincent Castranova, Shuo Lin, Andre E. Nel
ACS Nano. Author manuscript; available in PMC 2014 Jan 23.
Published in final edited form as: ACS Nano. 2011 Feb 22; 5(2): 1223–1235. Published online 2011 Jan 20. doi: 10.1021/nn1028482
PMCID:
PMC3900638
AbstractArticlePDF–3.0M
14.
Ethanol exposure disrupts extraembryonic microtubule cytoskeleton and embryonic blastomere cell adhesion, producing epiboly and gastrulation defects
Swapnalee Sarmah, Pooja Muralidharan, Courtney L. Curtis, Jeanette N. McClintick, Bryce B. Buente, David J. Holdgrafer, Osato Ogbeifun, Opeyemi C. Olorungbounmi, Liliana Patino, Ryan Lucas, Sonya Gilbert, Evan S. Groninger, Julia Arciero, Howard J. Edenberg, James A. Marrs
Biol Open. 2013 Oct 15; 2(10): 1013–1021. Published online 2013 Aug 14. doi: 10.1242/bio.20135546
PMCID:
PMC3798184
AbstractArticlePDF–959K
15.
Silencer-delimited transgenesis: NRSE/RE1 sequences promote neural-specific transgene expression in a NRSF/REST-dependent manner
Xiayang Xie, Jonathan R Mathias, Marie-Ange Smith, Steven L Walker, Yong Teng, Martin Distel, Reinhard W Köster, Howard I Sirotkin, Meera T Saxena, Jeff S Mumm
BMC Biol. 2012; 10: 93. Published online 2012 Nov 30. doi: 10.1186/1741-7007-10-93
PMCID:
PMC3529185
AbstractArticlePDF–6.0M
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
17.
Crystallization and preliminary X-ray analysis of ZHE1, a hatching enzyme from the zebrafish Danio rerio
Akitoshi Okada, Koji Nagata, Kaori Sano, Shigeki Yasumasu, Keiko Kubota, Jun Ohtsuka, Ichiro Iuchi, Masaru Tanokura
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Oct 1; 65(Pt 10): 1018–1020. Published online 2009 Sep 23. doi: 10.1107/S1744309109033016
PMCID:
PMC2765890
AbstractArticlePDF–166K
18.
Zebrafish promoter microarrays identify actively transcribed embryonic genes
Fiona C Wardle, Duncan T Odom, George W Bell, Bingbing Yuan, Timothy W Danford, Elizabeth L Wiellette, Elizabeth Herbolsheimer, Hazel L Sive, Richard A Young, James C Smith
Genome Biol. 2006; 7(8): R71. Published online 2006 Aug 4. doi: 10.1186/gb-2006-7-8-r71
PMCID:
PMC1779600
AbstractArticlePDF–1.1M
19.
The zebrafish gene map defines ancestral vertebrate chromosomes
Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot
Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305
PMCID:
PMC1199546
AbstractArticlePDF–595K
20.
15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis
Jane Lo, Sorcheng Lee, Min Xu, Feng Liu, Hua Ruan, Alvin Eun, Yawen He, Weiping Ma, Weefuen Wang, Zilong Wen, Jinrong Peng
Genome Res. 2003 Mar 1; 13(3): 455–466. doi: 10.1101/gr.885403
PMCID:
PMC430290
AbstractArticlePDF–981K

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