PMC Links for GEO Profiles (Select 65747728) - PMC

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Items: 19

Select item 100547011.

Zebrafish her3 knockout impacts developmental and cancer-related gene signatures

Matthew R. Kent, Delia Calderon, Katherine M. Silvius, Jack P. Kucinski, Collette A. LaVigne, Matthew V. Cannon, Genevieve C. Kendall

Dev Biol. Author manuscript; available in PMC 2024 Apr 1.

Published in final edited form as: Dev Biol. 2023 Apr; 496: 1–14. Published online 2023 Jan 23. doi: 10.1016/j.ydbio.2023.01.003

PMCID:: PMC10054701

Abstract Article PDF–2.6M

Select item 83201832.

Evolution of hes gene family in vertebrates: the hes5 cluster genes have specifically increased in frogs

Aya Kuretani, Takayoshi Yamamoto, Masanori Taira, Tatsuo Michiue

BMC Ecol Evol. 2021; 21: 147. Published online 2021 Jul 29. doi: 10.1186/s12862-021-01879-6

PMCID:: PMC8320183

Abstract Article PDF–4.8M

Select item 73122023.

Ionising Radiation Induces Promoter DNA Hypomethylation and Perturbs Transcriptional Activity of Genes Involved in Morphogenesis during Gastrulation in Zebrafish

Sophia Murat El Houdigui, Christelle Adam-Guillermin, Olivier Armant

Int J Mol Sci. 2020 Jun; 21(11): 4014. Published online 2020 Jun 4. doi: 10.3390/ijms21114014

PMCID:: PMC7312202

Abstract Article PDF–8.1M

Select item 69159494.

SOX19b regulates the premature neuronal differentiation of neural stem cells through EZH2-mediated histone methylation in neural tube development of zebrafish

Xian Li, Wenjuan Zhou, Xinyue Li, Ming Gao, Shufang Ji, Wenyu Tian, Guangyu Ji, Jingyi Du, Aijun Hao

Stem Cell Res Ther. 2019; 10: 389. Published online 2019 Dec 16. doi: 10.1186/s13287-019-1495-3

PMCID:: PMC6915949

Abstract Article PDF–2.9M

Select item 60834455.

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

Daniel E. Wagner, Caleb Weinreb, Zach M. Collins, James A. Briggs, Sean G. Megason, Allon M. Klein

Science. Author manuscript; available in PMC 2018 Aug 9.

Published in final edited form as: Science. 2018 Jun 1; 360(6392): 981–987. Published online 2018 Apr 26. doi: 10.1126/science.aar4362

PMCID:: PMC6083445

Abstract Article PDF–2.5M

Select item 60065746.

Identification of Dmrt2a downstream genes during zebrafish early development using a timely controlled approach

Rita Alexandra Pinto, José Almeida-Santos, Raquel Lourenço, Leonor Saúde

BMC Dev Biol. 2018; 18: 14. Published online 2018 Jun 19. doi: 10.1186/s12861-018-0173-5

PMCID:: PMC6006574

Abstract Article PDF–3.7M

Select item 59884217.

PAX3-FOXO1 transgenic zebrafish models identify HES3 as a mediator of rhabdomyosarcoma tumorigenesis

Genevieve C Kendall, Sarah Watson, Lin Xu, Collette A LaVigne, Whitney Murchison, Dinesh Rakheja, Stephen X Skapek, Franck Tirode, Olivier Delattre, James F Amatruda

eLife. 2018; 7: e33800. Published online 2018 Jun 5. doi: 10.7554/eLife.33800

PMCID:: PMC5988421

Abstract Article PDF–4.9M

Select item 39257608.

Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition

Miler T. Lee, Ashley R. Bonneau, Carter M. Takacs, Ariel A. Bazzini, Kate R. DiVito, Elizabeth S. Fleming, Antonio J. Giraldez

Nature. Author manuscript; available in PMC 2014 May 21.

Published in final edited form as: Nature. 2013 Nov 21; 503(7476): 360–364. Published online 2013 Sep 22. doi: 10.1038/nature12632

PMCID:: PMC3925760

Abstract Article PDF–831K

Select item 33965969.

Comparative and Evolutionary Analysis of the HES/HEY Gene Family Reveal Exon/Intron Loss and Teleost Specific Duplication Events

Mi Zhou, Jun Yan, Zhaowu Ma, Yang Zhou, Nibras Najm Abbood, Jianfeng Liu, Li Su, Haibo Jia, An-Yuan Guo

PLoS One. 2012; 7(7): e40649. Published online 2012 Jul 13. doi: 10.1371/journal.pone.0040649

PMCID:: PMC3396596

Abstract Article PDF–1.2M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 312527011.

The Enhancer of split transcription factor Her8a is a novel dimerisation partner for Her3 that controls anterior hindbrain neurogenesis in zebrafish

Katharine J Webb, Marion Coolen, Christian J Gloeckner, Christian Stigloher, Brigitte Bahn, Stefanie Topp, Marius Ueffing, Laure Bally-Cuif

BMC Dev Biol. 2011; 11: 27. Published online 2011 May 17. doi: 10.1186/1471-213X-11-27

PMCID:: PMC3125270

Abstract Article PDF–11M

Select item 308257412.

Zebrafish Her8a Is Activated by Su(H)-Dependent Notch Signaling and Is Essential for the Inhibition of Neurogenesis

Pei-Chen Chung, Wen-Shiuan Lin, Paul J. Scotting, Fu-Yu Hsieh, Hui-Lan Wu, Yi-Chuan Cheng

PLoS One. 2011; 6(4): e19394. Published online 2011 Apr 26. doi: 10.1371/journal.pone.0019394

PMCID:: PMC3082574

Abstract Article PDF–2.3M

Select item 286551813.

B1 SOX Coordinate Cell Specification with Patterning and Morphogenesis in the Early Zebrafish Embryo

Yuichi Okuda, Eri Ogura, Hisato Kondoh, Yusuke Kamachi

PLoS Genet. 2010 May; 6(5): e1000936. Published online 2010 May 6. doi: 10.1371/journal.pgen.1000936

PMCID:: PMC2865518

Abstract Article PDF–15M

Select item 285859114.

Dhrs3a Regulates Retinoic Acid Biosynthesis through a Feedback Inhibition Mechanism

L. Feng, R.E. Hernandez, J.S. Waxman, D. Yelon, C.B. Moens

Dev Biol. Author manuscript; available in PMC 2010 Aug 1.

Published in final edited form as: Dev Biol. 2010 Feb 1; 338(1): 1–14. Published online 2009 Oct 27. doi: 10.1016/j.ydbio.2009.10.029

PMCID:: PMC2858591

Abstract Article PDF–4.6M

Select item 285844515.

Zebrafish Pou5f1-dependent transcriptional networks in temporal control of early development

Daria Onichtchouk, Florian Geier, Bozena Polok, Daniel M Messerschmidt, Rebecca Mössner, Björn Wendik, Sungmin Song, Verdon Taylor, Jens Timmer, Wolfgang Driever

Mol Syst Biol. 2010; 6: 354. Published online 2010 Mar 9. doi: 10.1038/msb.2010.9

PMCID:: PMC2858445

Abstract Article PDF–5.8M

Select item 215074916.

Initiation of zebrafish hematopoiesis by the TATA-box-binding protein-related factor, Trf3

Daniel O. Hart, Tamal Raha, Nathan D. Lawson, Michael R. Green

Nature. Author manuscript; available in PMC 2008 Jun 13.

Published in final edited form as: Nature. 2007 Dec 13; 450(7172): 1082–1085. Published online 2007 Nov 28. doi: 10.1038/nature06349

PMCID:: PMC2150749

Abstract Article PDF–7.1M

Select item 119954617.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305