PMC Links for GEO Profiles (Select 65743369) - PMC

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Items: 16

Select item 70805881.

A Single-Cell Transcriptome Atlas for Zebrafish Development

Dylan R. Farnsworth, Lauren M. Saunders, Adam C. Miller

Dev Biol. Author manuscript; available in PMC 2021 Mar 15.

Published in final edited form as: Dev Biol. 2020 Mar 15; 459(2): 100–108. Published online 2019 Nov 27. doi: 10.1016/j.ydbio.2019.11.008

PMCID:: PMC7080588

Abstract Article PDF–1.5M

Select item 69811712.

Dstyk mutation leads to congenital scoliosis-like vertebral malformations in zebrafish via dysregulated mTORC1/TFEB pathway

Xianding Sun, Yang Zhou, Ruobin Zhang, Zuqiang Wang, Meng Xu, Dali Zhang, Junlan Huang, Fengtao Luo, Fangfang Li, Zhenhong Ni, Siru Zhou, Hangang Chen, Shuai Chen, Liang Chen, Xiaolan Du, Bo Chen, Haiyang Huang, Peng Liu, Liangjun Yin, Juhui Qiu, Di Chen, Chuxia Deng, Yangli Xie, Lingfei Luo, Lin Chen

Nat Commun. 2020; 11: 479. Published online 2020 Jan 24. doi: 10.1038/s41467-019-14169-z

PMCID:: PMC6981171

Abstract Article PDF–9.7M

Select item 69064973.

Fundc1 is necessary for proper body axis formation during embryogenesis in zebrafish

Gongyu Xu, Hao Shen, Emile Nibona, Kongyue Wu, Xiaomei Ke, Md. Abdullah Al Hafiz, Xiaoting Liang, Xueping Zhong, Qingchun Zhou, Chao Qi, Haobin Zhao

Sci Rep. 2019; 9: 18910. Published online 2019 Dec 11. doi: 10.1038/s41598-019-55415-0

PMCID:: PMC6906497

Abstract Article PDF–5.7M

Select item 67590744.

Skeletal Mineralization in Association with Type X Collagen Expression Is an Ancestral Feature for Jawed Vertebrates

Mélanie Debiais-Thibaud, Paul Simion, Stéphanie Ventéo, David Muñoz, Sylvain Marcellini, Sylvie Mazan, Tatjana Haitina

Mol Biol Evol. 2019 Oct; 36(10): 2265–2276. Published online 2019 Jul 4. doi: 10.1093/molbev/msz145

PMCID:: PMC6759074

Abstract Article PDF–936K

Select item 62479165.

Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis

Jeffrey A. Farrell, Yiqun Wang, Samantha J. Riesenfeld, Karthik Shekhar, Aviv Regev, Alexander F. Schier

Science. Author manuscript; available in PMC 2018 Dec 1.

Published in final edited form as: Science. 2018 Jun 1; 360(6392): eaar3131. Published online 2018 Apr 26. doi: 10.1126/science.aar3131

PMCID:: PMC6247916

Abstract Article PDF–1.8M

Select item 55260846.

Sheath cell invasion and trans-differentiation repair mechanical damage caused by loss of caveolae in the zebrafish notochord

Jamie Garcia, Jennifer Bagwell, Brian Njaine, James Norman, Daniel S. Levic, Susan Wopat, Sara E. Miller, Xiaojing Liu, Jason W. Locasale, Didier Y.R. Stainier, Michel Bagnat

Curr Biol. Author manuscript; available in PMC 2018 Jul 10.

Published in final edited form as: Curr Biol. 2017 Jul 10; 27(13): 1982–1989.e3. Published online 2017 Jun 22. doi: 10.1016/j.cub.2017.05.035

PMCID:: PMC5526084

Abstract Article PDF–1.0M

Select item 54943057.

In Vivo Regulation of the Zebrafish Endoderm Progenitor Niche by T-Box Transcription Factors

Andrew C. Nelson, Stephen J. Cutty, Saule N. Gasiunas, Isabella Deplae, Derek L. Stemple, Fiona C. Wardle

Cell Rep. 2017 Jun 27; 19(13): 2782–2795. Published online 2017 Jun 27. doi: 10.1016/j.celrep.2017.06.011

PMCID:: PMC5494305

Abstract Article

Select item 48707328.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 43793989.

Integrative View of α2,3-Sialyltransferases (ST3Gal) Molecular and Functional Evolution in Deuterostomes: Significance of Lineage-Specific Losses

Daniel Petit, Elin Teppa, Anne-Marie Mir, Dorothée Vicogne, Christine Thisse, Bernard Thisse, Cyril Filloux, Anne Harduin-Lepers

Mol Biol Evol. 2015 Apr; 32(4): 906–927. Published online 2014 Dec 21. doi: 10.1093/molbev/msu395

PMCID:: PMC4379398

Abstract Article PDF–1.6M

Select item 393810610.

Loss of col8a1a Function during Zebrafish Embryogenesis Results in Congenital Vertebral Malformations

Ryan S. Gray, Thomas Wilm, Jeff Smith, Michel Bagnat, Rodney M. Dale, Jacek Topczewski, Stephen L. Johnson, Lilianna Solnica-Krezel

Dev Biol. Author manuscript; available in PMC 2015 Feb 1.

Published in final edited form as: Dev Biol. 2014 Feb 1; 386(1): 72–85. Published online 2013 Dec 11. doi: 10.1016/j.ydbio.2013.11.028

PMCID:: PMC3938106

Abstract Article PDF–6.2M

Select item 380589511.

A Novel Zinc Finger Protein 219-like (ZNF219L) is Involved in the Regulation of Collagen Type 2 Alpha 1a (col2a1a) Gene Expression in Zebrafish Notochord

Huang-Wei Lien, Chung-Hsiang Yang, Chia-Hsiung Cheng, Chin-Chun Hung, Wei-Hao Liao, Pung-Pung Hwang, Yu-San Han, Chang-Jen Huang

Int J Biol Sci. 2013; 9(9): 872–886. Published online 2013 Sep 5. doi: 10.7150/ijbs.7126

PMCID:: PMC3805895

Abstract Article PDF–1.9M

Select item 371538112.

Juxtaposition of chemical and mutation- induced developmental defects in zebrafish reveal a novel copper-chelating activity for kalihinol F

Imelda T. Sandoval, Elizabeth J. Manos, Ryan M. Van Wagoner, Richard Glenn C. Delacruz, Kornelia Edes, Dennis R. Winge, Chris M. Ireland, David A. Jones

Chem Biol. Author manuscript; available in PMC 2014 Jun 20.

Published in final edited form as: Chem Biol. 2013 Jun 20; 20(6): 753–763. doi: 10.1016/j.chembiol.2013.05.008