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Select item 109627591.

A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins

Annabel Guichard, Shenzhao Lu, Oguz Kanca, Daniel Bressan, Yan Huang, Mengqi Ma, Sara Sanz Juste, Jonathan C. Andrews, Kristy L. Jay, Marketta Sneider, Ruth Schwartz, Mei-Chu Huang, Danqing Bei, Hongling Pan, Liwen Ma, Wen-Wen Lin, Ankush Auradkar, Pranjali Bhagwat, Soo Park, Kenneth H. Wan, Takashi Ohsako, Toshiyuki Takano-Shimizu, Susan E. Celniker, Michael F. Wangler, Shinya Yamamoto, Hugo J. Bellen, Ethan Bier

Cell Rep. Author manuscript; available in PMC 2024 Mar 25.

Published in final edited form as: Cell Rep. 2023 Aug 29; 42(8): 112842. Published online 2023 Jul 20. doi: 10.1016/j.celrep.2023.112842

PMCID:: PMC10962759

Abstract Article PDF–3.0M

Select item 104448902.

The deubiquitinase Leon/USP5 interacts with Atg1/ULK1 and antagonizes autophagy

Yueh-Ling Pai, Yuchieh Jay Lin, Wen-Hsin Peng, Li-Ting Huang, He-Yen Chou, Chien-Hsiang Wang, Cheng-Ting Chien, Guang-Chao Chen

Cell Death Dis. 2023 Aug; 14(8): 540. Published online 2023 Aug 22. doi: 10.1038/s41419-023-06062-x

PMCID:: PMC10444890

Abstract Article PDF–4.9M

Select item 98829583.

Combined modelling of mRNA decay dynamics and single-molecule imaging in the Drosophila embryo uncovers a role for P-bodies in 5′ to 3′ degradation

Lauren Forbes Beadle, Jennifer C. Love, Yuliya Shapovalova, Artem Artemev, Magnus Rattray, Hilary L. Ashe

PLoS Biol. 2023 Jan; 21(1): e3001956. Published online 2023 Jan 17. doi: 10.1371/journal.pbio.3001956

PMCID:: PMC9882958

Abstract Article PDF–3.3M

Select item 89900004.

Usp5, Usp34, and Otu1 deubiquitylases mediate DNA repair in Drosophila melanogaster

Zoltán G. Páhi, Levente Kovács, Diána Szűcs, Barbara N. Borsos, Péter Deák, Tibor Pankotai

Sci Rep. 2022; 12: 5870. Published online 2022 Apr 7. doi: 10.1038/s41598-022-09703-x

PMCID:: PMC8990000

Abstract Article PDF–1.5M

Select item 87245775.

Origin and Development of the Adipose Tissue, a Key Organ in Physiology and Disease

Esmeralda Parra-Peralbo, Ana Talamillo, Rosa Barrio

Front Cell Dev Biol. 2021; 9: 786129. Published online 2021 Dec 21. doi: 10.3389/fcell.2021.786129

PMCID:: PMC8724577

Abstract Article PDF–1.5M

Select item 84688276.

Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders

Stefano Sechi, Angela Karimpour-Ghahnavieh, Anna Frappaolo, Laura Di Francesco, Roberto Piergentili, Eugenia Schininà, Pier Paolo D’Avino, Maria Grazia Giansanti

Cells. 2021 Sep; 10(9): 2336. Published online 2021 Sep 6. doi: 10.3390/cells10092336

PMCID:: PMC8468827

Abstract Article PDF–4.1M

Select item 81297937.

Drosophila USP22/nonstop polarizes the actin cytoskeleton during collective border cell migration

Hammed Badmos, Neville Cobbe, Amy Campbell, Richard Jackson, Daimark Bennett

J Cell Biol. 2021 Jul 5; 220(7): e202007005. Published online 2021 May 14. doi: 10.1083/jcb.202007005

PMCID:: PMC8129793

Abstract Article PDF–6.5M

Select item 73791588.

N-Terminal Peptide Detection with Optimized Peptide-Spectrum Matching and Streamlined Sequence Libraries

Brynne E. Lycette, Jacob W. Glickman, Samuel J. Roth, Abigail E. Cram, Tae Hee Kim, Danny Krizanc, Michael P. Weir

J Proteome Res. Author manuscript; available in PMC 2020 Jul 24.

Published in final edited form as: J Proteome Res. 2016 Sep 2; 15(9): 2891–2899. Published online 2016 Aug 23. doi: 10.1021/acs.jproteome.5b00996

PMCID:: PMC7379158

Abstract Article PDF–696K

Select item 72993419.

Lola regulates Drosophila adult midgut homeostasis via non-canonical hippo signaling

Xue Hao, Shimin Wang, Yi Lu, Wentao Yu, Pengyue Li, Dan Jiang, Tong Guo, Mengjie Li, Jinhui Li, Jinjin Xu, Wenqing Wu, Margaret S Ho, Lei Zhang

eLife. 2020; 9: e47542. Published online 2020 Jan 14. doi: 10.7554/eLife.47542

PMCID:: PMC7299341

Abstract Article PDF–13M

Select item 626279610.

Prp8 regulates oncogene-induced hyperplastic growth in Drosophila

Cecilia H. Fernández-Espartero, Alberto Rizzo, Alexander D. Fulford, Julia Falo-Sanjuan, Damien Goutte-Gattat, Paulo S. Ribeiro

Development. 2018 Nov 15; 145(22): dev162156. Published online 2018 Nov 12. doi: 10.1242/dev.162156

PMCID:: PMC6262796

Abstract Article

Select item 590644911.

The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster

Lisa Jehrke, Fiona A. Stewart, Andrea Droste, Mathias Beller

Sci Rep. 2018; 8: 6215. Published online 2018 Apr 18. doi: 10.1038/s41598-018-24542-5

PMCID:: PMC5906449

Abstract Article PDF–4.5M

Select item 570780512.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900213.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 492804714.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 462747915.

Deubiquitination of Ci/Gli by Usp7/HAUSP regulates Hedgehog Signaling

Zizhang Zhou, Xia Yao, Shuang Li, Yue Xiong, Xiaohua Dong, Yun Zhao, Jin Jiang, Qing Zhang

Dev Cell. Author manuscript; available in PMC 2016 Jul 6.

Published in final edited form as: Dev Cell. 2015 Jul 6; 34(1): 58–72. Published online 2015 Jun 25. doi: 10.1016/j.devcel.2015.05.016

PMCID:: PMC4627479

Abstract Article PDF–1.3M

Select item 461355916.

The evolutionarily conserved transcription factor PRDM12 controls sensory neuron development and pain perception

Vanja Nagy, Tiffany Cole, Claude Van Campenhout, Thang M Khoung, Calvin Leung, Simon Vermeiren, Maria Novatchkova, Daniel Wenzel, Domagoj Cikes, Anton A Polyansky, Ivona Kozieradzki, Arabella Meixner, Eric J Bellefroid, G Gregory Neely, Josef M Penninger

Cell Cycle. 2015 Jun 15; 14(12): 1799–1808. Published online 2015 Apr 18. doi: 10.1080/15384101.2015.1036209

Correction in:: Cell Cycle. 2015; 14(19): 3203.

PMCID:: PMC4613559

Abstract Article PDF–989K

Select item 457069717.

Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach

Flavio Pazos Obregón, Cecilia Papalardo, Sebastián Castro, Gustavo Guerberoff, Rafael Cantera

BMC Genomics. 2015; 16(1): 694. Published online 2015 Sep 15. doi: 10.1186/s12864-015-1888-3

PMCID:: PMC4570697

Abstract Article PDF–2.0M

Select item 456802518.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833019.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832920.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

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