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Select item 110445051.

Dysregulation of innate immune signaling in animal models of spinal muscular atrophy

Eric L. Garcia, Rebecca E. Steiner, Amanda C. Raimer, Laura E. Herring, A. Gregory Matera, Ashlyn M. Spring

BMC Biol. 2024; 22: 94. Published online 2024 Apr 25. doi: 10.1186/s12915-024-01888-z

PMCID:: PMC11044505

Abstract Article PDF–4.0M

Select item 101057362.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 95260663.

The RNA-binding protein Swm is critical for Drosophila melanogaster intestinal progenitor cell maintenance

Ishara S Ariyapala, Kasun Buddika, Heather A Hundley, Brian R Calvi, Nicholas S Sokol

Genetics. 2022 Oct; 222(2): iyac099. Published online 2022 Jun 28. doi: 10.1093/genetics/iyac099

PMCID:: PMC9526066

Abstract Article PDF–1.4M

Select item 73061794.

Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons

Anne L. Sapiro, Emily C. Freund, Lucas Restrepo, Huan-Huan Qiao, Amruta Bhate, Qin Li, Jian-Quan Ni, Timothy J. Mosca, Jin Billy Li

Cell Rep. Author manuscript; available in PMC 2020 Jun 21.

Published in final edited form as: Cell Rep. 2020 May 19; 31(7): 107654. doi: 10.1016/j.celrep.2020.107654

PMCID:: PMC7306179

Abstract Article PDF–2.1M

Select item 69834505.

A cell atlas of the adult Drosophila midgut

Ruei-Jiun Hung, Yanhui Hu, Rory Kirchner, Yifang Liu, Chiwei Xu, Aram Comjean, Sudhir Gopal Tattikota, Fangge Li, Wei Song, Shannan Ho Sui, Norbert Perrimon

Proc Natl Acad Sci U S A. 2020 Jan 21; 117(3): 1514–1523. Published online 2020 Jan 8. doi: 10.1073/pnas.1916820117

PMCID:: PMC6983450

Abstract Article PDF–11M

Select item 69615786.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 69193317.

Tau-Mediated Disruption of the Spliceosome Triggers Cryptic RNA Splicing and Neurodegeneration in Alzheimer’s Disease

Yi-Chen Hsieh, Caiwei Guo, Hari K. Yalamanchili, Measho Abreha, Rami Al-Ouran, Yarong Li, Eric B. Dammer, James J. Lah, Allan I. Levey, David A. Bennett, Philip L. De Jager, Nicholas T. Seyfried, Zhandong Liu, Joshua M. Shulman

Cell Rep. Author manuscript; available in PMC 2019 Dec 18.

Published in final edited form as: Cell Rep. 2019 Oct 8; 29(2): 301–316.e10. doi: 10.1016/j.celrep.2019.08.104

PMCID:: PMC6919331

Abstract Article PDF–2.7M

Select item 68904658.

Drosophila PSI controls circadian period and the phase of circadian behavior under temperature cycle via tim splicing

Lauren E Foley, Jinli Ling, Radhika Joshi, Naveh Evantal, Sebastian Kadener, Patrick Emery

eLife. 2019; 8: e50063. Published online 2019 Nov 8. doi: 10.7554/eLife.50063

PMCID:: PMC6890465

Abstract Article PDF–3.0M

Select item 66202789.

Precursor RNA processing 3 is required for male fertility, and germline stem cell self-renewal and differentiation via regulating spliceosome function in Drosophila testes

Xia Chen, Xiaojin Luan, Qianwen Zheng, Chen Qiao, Wanyin Chen, Min Wang, Yidan Yan, Bing Xie, Cong Shen, Zeyu He, Jun Zhang, Mingxi Liu, Xing Hu, Hong Li, Bo Zheng, Jie Fang, Jun Yu

Sci Rep. 2019; 9: 9988. Published online 2019 Jul 10. doi: 10.1038/s41598-019-46419-x

PMCID:: PMC6620278

Abstract Article PDF–2.0M

Select item 644367110.

Srlp is crucial for the self-renewal and differentiation of germline stem cells via RpL6 signals in Drosophila testes

Jun Yu, Yidan Yan, Xiaojin Luan, Chen Qiao, Yuanyuan Liu, Dan Zhao, Bing Xie, Qianwen Zheng, Min Wang, Wanyin Chen, Cong Shen, Zeyu He, Xing Hu, Xiaoyan Huang, Hong Li, Qixiang Shao, Xia Chen, Bo Zheng, Jie Fang

Cell Death Dis. 2019 Apr; 10(4): 294. Published online 2019 Apr 1. doi: 10.1038/s41419-019-1527-z

PMCID:: PMC6443671

Abstract Article PDF–9.7M

Select item 642956411.

A genome-wide RNA interference screen in Drosophila melanogaster cells for new components of the Hh signaling pathway

Kent Nybakken, Steven A Vokes, Ting-Yi Lin, Andrew P McMahon, Norbert Perrimon

Nat Genet. Author manuscript; available in PMC 2019 Mar 22.

Published in final edited form as: Nat Genet. 2005 Dec; 37(12): 1323–1332. Published online 2005 Nov 20. doi: 10.1038/ng1682

PMCID:: PMC6429564

Abstract Article PDF–1.8M

Select item 638598712.

Composition of the Survival Motor Neuron (SMN) Complex in Drosophila melanogaster

A. Gregory Matera, Amanda C. Raimer, Casey A. Schmidt, Jo A. Kelly, Gaith N. Droby, David Baillat, Sara ten Have, Angus I. Lamond, Eric J. Wagner, Kelsey M. Gray

G3 (Bethesda) 2019 Feb; 9(2): 491–503. Published online 2018 Dec 21. doi: 10.1534/g3.118.200874

PMCID:: PMC6385987

Abstract Article PDF–2.9M

Select item 590993613.

Self-oligomerization regulates stability of survival motor neuron protein isoforms by sequestering an SCF^Slmb degron

Kelsey M. Gray, Kevin A. Kaifer, David Baillat, Ying Wen, Thomas R. Bonacci, Allison D. Ebert, Amanda C. Raimer, Ashlyn M. Spring, Sara ten Have, Jacqueline J. Glascock, Kushol Gupta, Gregory D. Van Duyne, Michael J. Emanuele, Angus I. Lamond, Eric J. Wagner, Christian L. Lorson, A. Gregory Matera

Mol Biol Cell. 2018 Jan 15; 29(2): 96–110. doi: 10.1091/mbc.E17-11-0627

PMCID:: PMC5909936

Abstract Article PDF–3.1M

Select item 570780514.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900215.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 514468016.

Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs

Hongmei Li, Chuansheng Hu, Ling Bai, Hua Li, Mingfa Li, Xiaodong Zhao, Daniel M. Czajkowsky, Zhifeng Shao

DNA Res. 2016 Dec; 23(6): 571–580. Published online 2016 Aug 24. doi: 10.1093/dnares/dsw040

PMCID:: PMC5144680

Abstract Article PDF–688K

Select item 502578217.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

Select item 501100018.

The spliceosomal protein SF3B5 is a novel component of Drosophila SAGA that functions in gene expression independent of splicing

Rachel Stegeman, Peyton J. Spreacker, Selene K. Swanson, Robert Stephenson, Laurence Florens, Michael P. Washburn, Vikki M. Weake

J Mol Biol. Author manuscript; available in PMC 2017 Sep 11.

Published in final edited form as: J Mol Biol. 2016 Sep 11; 428(18): 3632–3649. Published online 2016 May 13. doi: 10.1016/j.jmb.2016.05.009

PMCID:: PMC5011000

Abstract Article PDF–1.3M

Select item 481371219.

A Quantitative Proteomic Analysis of In Vitro Assembled Chromatin

Moritz Carl Völker-Albert, Miriam Caroline Pusch, Andreas Fedisch, Pierre Schilcher, Andreas Schmidt, Axel Imhof

Mol Cell Proteomics. 2016 Mar; 15(3): 945–959. Published online 2016 Jan 25. doi: 10.1074/mcp.M115.053553

PMCID:: PMC4813712

Abstract Article PDF–2.6M

Select item 478811620.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

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