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Select item 101057361.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 81049462.

Highly effective proximate labeling in Drosophila

Bo Zhang, Yuanbing Zhang, Ji-Long Liu

G3 (Bethesda) 2021 May; 11(5): jkab077. Published online 2021 Mar 16. doi: 10.1093/g3journal/jkab077

Correction in:: G3 (Bethesda). 2022 Mar; 12(3): jkac005.

PMCID:: PMC8104946

Abstract Article PDF–1.1M

Select item 74632943.

Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster

Julie M. Cridland, Alex C. Majane, Hayley K. Sheehy, David J. Begun

Genetics. 2020 Sep; 216(1): 79–93. Published online 2020 Jul 31. doi: 10.1534/genetics.120.303515

PMCID:: PMC7463294

Abstract Article PDF–1011K

Select item 70724904.

Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster Is Involved in Chromosome-Wide Gene Regulation

Samaneh Ekhteraei-Tousi, Jacob Lewerentz, Jan Larsson

Cells. 2020 Feb; 9(2): 323. Published online 2020 Jan 30. doi: 10.3390/cells9020323

PMCID:: PMC7072490

Abstract Article PDF–5.2M

Select item 69593355.

Exploitation of Drosophila Choriogenesis Process as a Model Cellular System for Assessment of Compound Toxicity: the Phloroglucinol Paradigm

Konstantinos E. Keramaris, Konstantinos Konstantopoulos, Lukas H. Margaritis, Athanassios D. Velentzas, Issidora S. Papassideri, Dimitrios J. Stravopodis

Sci Rep. 2020; 10: 242. Published online 2020 Jan 14. doi: 10.1038/s41598-019-57113-3

PMCID:: PMC6959335

Abstract Article PDF–2.5M

Select item 62083996.

The indispensable contribution of s38 protein to ovarian-eggshell morphogenesis in Drosophila melanogaster

Athanassios D. Velentzas, Panagiotis D. Velentzas, Stamatia A. Katarachia, Athanasios K. Anagnostopoulos, Niki E. Sagioglou, Eleni V. Thanou, Maria M. Tsioka, Vassiliki E. Mpakou, Zoe Kollia, Vassilios E. Gavriil, Issidora S. Papassideri, George Th. Tsangaris, Alkiviadis-Constantinos Cefalas, Evangelia Sarantopoulou, Dimitrios J. Stravopodis

Sci Rep. 2018; 8: 16103. Published online 2018 Oct 31. doi: 10.1038/s41598-018-34532-2

PMCID:: PMC6208399

Abstract Article PDF–5.1M

Select item 57078057.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890028.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 55863799.

DNA Replication Control During Drosophila Development: Insights into the Onset of S Phase, Replication Initiation, and Fork Progression

Brian L. Hua, Terry L. Orr-Weaver

Genetics. 2017 Sep; 207(1): 29–47. Published online 2017 Aug 31. doi: 10.1534/genetics.115.186627

PMCID:: PMC5586379

Abstract Article PDF–1.2M

Select item 513774110.

Multiple mechanisms contribute to double-strand break repair at rereplication forks in Drosophila follicle cells

Jessica L. Alexander, Kelly Beagan, Terry L. Orr-Weaver, Mitch McVey

Proc Natl Acad Sci U S A. 2016 Nov 29; 113(48): 13809–13814. Published online 2016 Nov 14. doi: 10.1073/pnas.1617110113

PMCID:: PMC5137741

Abstract Article PDF–1.0M

Select item 510328611.

MiR-980 is a memory suppressor microRNA that regulates the autism-susceptibility gene, A2bp1

Tugba Guven-Ozkan, Germain U. Busto, Soleil S. Schutte, Isaac Cervantes-Sandoval, Diane K. O’Dowd, Ronald L. Davis

Cell Rep. Author manuscript; available in PMC 2016 Nov 10.

Published in final edited form as: Cell Rep. 2016 Feb 23; 14(7): 1698–1709. Published online 2016 Feb 11. doi: 10.1016/j.celrep.2016.01.040

PMCID:: PMC5103286

Abstract Article PDF–2.5M

Select item 506756112.

Targeted Downregulation of s36 Protein Unearths its Cardinal Role in Chorion Biogenesis and Architecture during Drosophila melanogaster Oogenesis

Athanassios D. Velentzas, Panagiotis D. Velentzas, Niki E. Sagioglou, Eumorphia G. Konstantakou, Athanasios K. Anagnostopoulos, Maria M. Tsioka, Vassiliki E. Mpakou, Zoe Kollia, Christos Consoulas, Lukas H. Margaritis, Issidora S. Papassideri, George Th. Tsangaris, Evangelia Sarantopoulou, Alkiviadis-Constantinos Cefalas, Dimitrios J. Stravopodis

Sci Rep. 2016; 6: 35511. Published online 2016 Oct 18. doi: 10.1038/srep35511

PMCID:: PMC5067561

Abstract Article PDF–2.6M

Select item 452833013.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832914.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288715.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 415241316.

Diversity and dynamics of the Drosophila transcriptome

James B. Brown, Nathan Boley, Robert Eisman, Gemma E. May, Marcus H. Stoiber, Michael O. Duff, Ben W. Booth, Jiayu Wen, Soo Park, Ana Maria Suzuki, Kenneth H. Wan, Charles Yu, Dayu Zhang, Joseph W. Carlson, Lucy Cherbas, Brian D. Eads, David Miller, Keithanne Mockaitis, Johnny Roberts, Carrie A. Davis, Erwin Frise, Ann S. Hammonds, Sara Olson, Sol Shenker, David Sturgill, Anastasia A. Samsonova, Richard Weiszmann, Garret Robinson, Juan Hernandez, Justen Andrews, Peter J. Bickel, Piero Carninci, Peter Cherbas, Thomas R. Gingeras, Roger A. Hoskins, Thomas C. Kaufman, Eric C. Lai, Brian Oliver, Norbert Perrimon, Brenton R. Graveley, Susan E. Celniker

Nature. Author manuscript; available in PMC 2015 Feb 28.

Published in final edited form as: Nature. 2014 Aug 28; 512(7515): 393–399. doi: 10.1038/nature12962