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Items: 19

1.
Ccn2a-FGFR1-SHH signaling is necessary for intervertebral disc homeostasis and regeneration in adult zebrafish
Amey Y. Rayrikar, Ganesh A. Wagh, Manas K. Santra, Chinmoy Patra
Development. 2023 Jan 1; 150(1): dev201036. Published online 2023 Jan 6. doi: 10.1242/dev.201036
PMCID:
PMC10108606
AbstractArticle
2.
The Shape of the Jaw—Zebrafish Col11a1a Regulates Meckel’s Cartilage Morphogenesis and Mineralization
Jonathon C. Reeck, Julia Thom Oxford
J Dev Biol. 2022 Dec; 10(4): 40. Published online 2022 Sep 22. doi: 10.3390/jdb10040040
PMCID:
PMC9590009
AbstractArticlePDF–3.3M
3.
Comprehensive Mapping and Dynamics of Site-Specific Prolyl-Hydroxylation, Lysyl-Hydroxylation and Lysyl O-Glycosylation of Collagens Deposited in ECM During Zebrafish Heart Regeneration
Vivek Sarohi, Shriya Srivastava, Trayambak Basak
Front Mol Biosci. 2022; 9: 892763. Published online 2022 Jun 16. doi: 10.3389/fmolb.2022.892763
PMCID:
PMC9245515
AbstractArticlePDF–2.9M
4.
Authentication of a novel antibody to zebrafish collagen type XI alpha 1 chain (Col11a1a)
Jonathon C. Reeck, Makenna J. Hardy, Xinzhu Pu, Cynthia Keller-Peck, Julia Thom Oxford
BMC Res Notes. 2021; 14: 359. Published online 2021 Sep 15. doi: 10.1186/s13104-021-05770-x
PMCID:
PMC8444443
AbstractArticlePDF–1.9M
5.
A Toolbox for Efficient Proximity-Dependent Biotinylation in Zebrafish Embryos
Shimon M. Rosenthal, Tvisha Misra, Hala Abdouni, Tess C. Branon, Alice Y. Ting, Ian C. Scott, Anne-Claude Gingras
Mol Cell Proteomics. 2021; 20: 100128. Published online 2021 Jul 29. doi: 10.1016/j.mcpro.2021.100128
PMCID:
PMC8383115
AbstractArticlePDF–2.4M
6.
Origin and function of activated fibroblast states during zebrafish heart regeneration
Bo Hu, Sara Lelek, Bastiaan Spanjaard, Hadil El-Sammak, Mariana Guedes Simões, Janita Mintcheva, Hananeh Aliee, Ronny Schäfer, Alexander M. Meyer, Fabian Theis, Didier Y. R. Stainier, Daniela Panáková, Jan Philipp Junker
Nat Genet. 2022; 54(8): 1227–1237. Published online 2022 Jul 21. doi: 10.1038/s41588-022-01129-5
PMCID:
PMC7613248
AbstractArticlePDF–7.0M
7.
Col11a1a Expression Is Required for Zebrafish Development
Makenna J. Hardy, Jonathon C. Reeck, Ming Fang, Jason S. Adams, Julia Thom Oxford
J Dev Biol. 2020 Sep; 8(3): 16. Published online 2020 Aug 28. doi: 10.3390/jdb8030016
PMCID:
PMC7558312
AbstractArticlePDF–2.8M
8.
Regenerating zebrafish fin epigenome is characterized by stable lineage-specific DNA methylation and dynamic chromatin accessibility
Hyung Joo Lee, Yiran Hou, Yujie Chen, Zea Z. Dailey, Aiyana Riddihough, Hyo Sik Jang, Ting Wang, Stephen L. Johnson
Genome Biol. 2020; 21: 52. Published online 2020 Feb 27. doi: 10.1186/s13059-020-1948-0
PMCID:
PMC7047409
AbstractArticlePDF–4.5M
9.
Collagen COL22A1 maintains vascular stability and mutations in COL22A1 are potentially associated with intracranial aneurysms
Quynh V. Ton, Daniel Leino, Sarah A. Mowery, Nina O. Bredemeier, Pascal J. Lafontant, Allison Lubert, Suman Gurung, Janice L. Farlow, Tatiana M. Foroud, Joseph Broderick, Saulius Sumanas
Dis Model Mech. 2018 Dec 1; 11(12): dmm033654. Published online 2018 Dec 12. doi: 10.1242/dmm.033654
PMCID:
PMC6307901
AbstractArticle
10.
Transient fibrosis resolves via fibroblast inactivation in the regenerating zebrafish heart
Héctor Sánchez-Iranzo, María Galardi-Castilla, Andrés Sanz-Morejón, Juan Manuel González-Rosa, Ricardo Costa, Alexander Ernst, Julio Sainz de Aja, Xavier Langa, Nadia Mercader
Proc Natl Acad Sci U S A. 2018 Apr 17; 115(16): 4188–4193. Published online 2018 Apr 2. doi: 10.1073/pnas.1716713115
PMCID:
PMC5910827
AbstractArticlePDF–1.8M
11.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe
BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z
PMCID:
PMC4870732
AbstractArticlePDF–1.8M
12.
Ewing Sarcoma Ewsa Protein Regulates Chondrogenesis of Meckel’s Cartilage through Modulation of Sox9 in Zebrafish
Chris Merkes, Timothy K. Turkalo, Nicole Wilder, Hyewon Park, Luke W. Wenger, Seth J. Lewin, Mizuki Azuma
PLoS One. 2015; 10(1): e0116627. Published online 2015 Jan 24. doi: 10.1371/journal.pone.0116627
Correction in:
PLoS One. 2015; 10(3): e0123487.
PMCID:
PMC4305327
AbstractArticlePDF–6.3M
13.
Drug screening in Scn1a zebrafish mutant identifies clemizole as a potential Dravet Syndrome treatment
Scott C. Baraban, Matthew T. Dinday, Gabriela A. Hortopan
Nat Commun. Author manuscript; available in PMC 2014 Mar 3.
Published in final edited form as: Nat Commun. 2013; 4: 2410. doi: 10.1038/ncomms3410
PMCID:
PMC3891590
AbstractArticlePDF–2.1M
14.
A Novel Zinc Finger Protein 219-like (ZNF219L) is Involved in the Regulation of Collagen Type 2 Alpha 1a (col2a1a) Gene Expression in Zebrafish Notochord
Huang-Wei Lien, Chung-Hsiang Yang, Chia-Hsiung Cheng, Chin-Chun Hung, Wei-Hao Liao, Pung-Pung Hwang, Yu-San Han, Chang-Jen Huang
Int J Biol Sci. 2013; 9(9): 872–886. Published online 2013 Sep 5. doi: 10.7150/ijbs.7126
PMCID:
PMC3805895
AbstractArticlePDF–1.9M
15.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
16.
The expression patterns of minor fibrillar collagens during development in zebrafish
Ming Fang, Jason S Adams, B Lane Mcmahan, Raquel J Brown, Julia Thom Oxford
Gene Expr Patterns. Author manuscript; available in PMC 2011 Oct 1.
Published in final edited form as: Gene Expr Patterns. 2010 Oct–Dec; 10(7-8): 315–322. Published online 2010 Jul 18. doi: 10.1016/j.gep.2010.07.002
PMCID:
PMC2956583
AbstractArticlePDF–3.0M
17.
Characterization of the Six Zebrafish Clade B Fibrillar Procollagen Genes, with Evidence for Evolutionarily Conserved Alternative Splicing within the pro-α1(V) C-propeptide
Guy G. Hoffman, Amanda M. Branam, Guorui Huang, Francisco Pelegri, William G. Cole, Richard M. Wenstrup, Daniel S. Greenspan
Matrix Biol. Author manuscript; available in PMC 2011 May 1.
Published in final edited form as: Matrix Biol. 2010 May; 29(4): 261–275. Published online 2010 Jan 25. doi: 10.1016/j.matbio.2010.01.006
PMCID:
PMC2862785
AbstractArticlePDF–4.6M
18.
Expression Profiling and Comparative Genomics Identify a Conserved Regulatory Region Controlling Midline Expression in the Zebrafish Embryo
Thomas Dickmeis, Charles Plessy, Sepand Rastegar, Pia Aanstad, Ralf Herwig, Frédéric Chalmel, Nadine Fischer, Uwe Strähle
Genome Res. 2004 Feb; 14(2): 228–238. doi: 10.1101/gr.1819204
PMCID:
PMC327098
AbstractArticlePDF–532K
19.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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