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Select item 110399961.

NUDT16 regulates CtIP PARylation to dictate homologous recombination repair

Zhen Zhang, William E Samsa, Zihua Gong

Nucleic Acids Res. 2024 Apr 24; 52(7): 3761–3777. Published online 2024 Feb 7. doi: 10.1093/nar/gkae064

PMCID:: PMC11039996

Abstract Article PDF–2.4M

Select item 102374222.

TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing

Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan

Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233

PMCID:: PMC10237422

Abstract Article PDF–23M

Select item 91369433.

Interactomic analysis reveals a homeostatic role for the HIV restriction factor TRIM5α in mitophagy

Bhaskar Saha, Michelle Salemi, Geneva L. Williams, Seeun Oh, Michael L. Paffett, Brett Phinney, Michael A. Mandell

Cell Rep. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell Rep. 2022 May 10; 39(6): 110797. doi: 10.1016/j.celrep.2022.110797

PMCID:: PMC9136943

Abstract Article PDF–3.2M

Select item 88991674.

Transcriptomic profile investigations highlight a putative role for NUDT16 in sepsis

Susie Shih Yin Huang, Darawan Rinchai, Mohammed Toufiq, Basirudeen Syed Ahamed Kabeer, Jessica Roelands, Wouter Hendrickx, Sabri Boughorbel, Davide Bedognetti, Nicholas Van Panhuys, Damien Chaussabel, Mathieu Garand

J Cell Mol Med. 2022 Mar; 26(5): 1714–1721. Published online 2022 Feb 17. doi: 10.1111/jcmm.17240

PMCID:: PMC8899167

Abstract Article PDF–411K

Select item 82666175.

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins

Benjamin Lang, Jae-Seong Yang, Mireia Garriga-Canut, Silvia Speroni, Moritz Aschern, Maria Gili, Tobias Hoffmann, Gian Gaetano Tartaglia, Sebastian P Maurer

Nucleic Acids Res. 2021 Jul 9; 49(12): 6702–6721. Published online 2021 Jun 16. doi: 10.1093/nar/gkab490

PMCID:: PMC8266617

Abstract Article PDF–4.0M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 81267837.

CAG RNAs induce DNA damage and apoptosis by silencing NUDT16 expression in polyglutamine degeneration

Shaohong Peng, Pei Guo, Xiao Lin, Ying An, Kong Hung Sze, Matthew Ho Yan Lau, Zhefan Stephen Chen, Qianwen Wang, Wen Li, Jacquelyne Ka-Li Sun, Sum Yi Ma, Ting-Fung Chan, Kwok-Fai Lau, Jacky Chi Ki Ngo, Kin Ming Kwan, Chun-Ho Wong, Sik Lok Lam, Steven C. Zimmerman, Tiziano Tuccinardi, Zhong Zuo, Ho Yu Au-Yeung, Hei-Man Chow, Ho Yin Edwin Chan

Proc Natl Acad Sci U S A. 2021 May 11; 118(19): e2022940118. Published online 2021 May 4. doi: 10.1073/pnas.2022940118

PMCID:: PMC8126783

Abstract Article PDF–3.4M

Select item 76060088.

BCAR1 promotes proliferation and cell growth in lung adenocarcinoma via upregulation of POLR2A

Chun‐guo Mao, Sha‐sha Jiang, Cheng Shen, Tan Long, Hua Jin, Qun‐You Tan, Bo Deng

Thorac Cancer. 2020 Nov; 11(11): 3326–3336. Published online 2020 Oct 1. doi: 10.1111/1759-7714.13676

PMCID:: PMC7606008

Abstract Article PDF–2.5M

Select item 73375249.

Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs

Sunny Sharma, Ewa Grudzien-Nogalska, Keith Hamilton, Xinfu Jiao, Jun Yang, Liang Tong, Megerditch Kiledjian

Nucleic Acids Res. 2020 Jul 9; 48(12): 6788–6798. Published online 2020 May 20. doi: 10.1093/nar/gkaa402

PMCID:: PMC7337524

Abstract Article PDF–2.4M

Select item 705657810.

Nudix hydrolase NUDT16 regulates 53BP1 protein by reversing 53BP1 ADP-ribosylation

Fan Zhang, Lihong Lou, Bo Peng, Xiaotian Song, Ofer Reizes, Alexandru Almasan, Zihua Gong

Cancer Res. Author manuscript; available in PMC 2020 Sep 1.

Published in final edited form as: Cancer Res. 2020 Mar 1; 80(5): 999–1010. Published online 2020 Jan 7. doi: 10.1158/0008-5472.CAN-19-2205

Correction in:: Cancer Res. 2022 Aug 3; 82(15): 2807.

PMCID:: PMC7056578

Abstract Article PDF–2.1M

Select item 590056211.

Hydrolytic activity of human Nudt16 enzyme on dinucleotide cap analogs and short capped oligonucleotides

Renata Grzela, Karolina Nasilowska, Maciej Lukaszewicz, Michal Tyras, Janusz Stepinski, Marzena Jankowska-Anyszka, Elzbieta Bojarska, Edward Darzynkiewicz

RNA. 2018 May; 24(5): 633–642. doi: 10.1261/rna.065698.118

PMCID:: PMC5900562

Abstract Article PDF–4.4M

Select item 553161112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 550132113.

Epigenetic loss of the RNA decapping enzyme NUDT16 mediates C-MYC activation in T-cell acute lymphoblastic leukemia

C Anadón, G van Tetering, H J Ferreira, C Moutinho, A Martínez-Cardús, A Villanueva, M Soler, H Heyn, S Moran, M Castro de Moura, F Setien, A Vidal, E Genescà, J M Ribera, J F Nomdedeu, S Guil, M Esteller

Leukemia. 2017 Jul; 31(7): 1622–1625. Prepublished online 2017 Mar 27. Published online 2017 Apr 11. doi: 10.1038/leu.2017.99

PMCID:: PMC5501321

Article PDF–472K

Select item 501331514.

Defining the Protein-Protein Interaction Network of the Human Protein Tyrosine Phosphatase Family

Xu Li, Kim My Tran, Kathryn E. Aziz, Alexey V. Sorokin, Junjie Chen, Wenqi Wang

Mol Cell Proteomics. 2016 Sep; 15(9): 3030–3044. Published online 2016 Jul 18. doi: 10.1074/mcp.M116.060277

PMCID:: PMC5013315

Abstract Article PDF–3.2M

Select item 487529015.

hNUDT16: a universal decapping enzyme for small nucleolar RNA and cytoplasmic mRNA

Guangwen Lu, Jie Zhang, Yan Li, Zhixin Li, Na Zhang, Xiang Xu, Tingting Wang, Zhenhong Guan, George F. Gao, Jinghua Yan

Protein Cell. 2011 Jan; 2(1): 64–73. Published online 2011 Feb 20. doi: 10.1007/s13238-011-1009-2

PMCID:: PMC4875290

Abstract Article PDF–1.1M

Select item 448589016.

Structural Basis for the Specificity of Human NUDT16 and Its Regulation by Inosine Monophosphate

Lionel Trésaugues, Thomas Lundbäck, Martin Welin, Susanne Flodin, Tomas Nyman, Camilla Silvander, Susanne Gräslund, Pär Nordlund

PLoS One. 2015; 10(6): e0131507. Published online 2015 Jun 29. doi: 10.1371/journal.pone.0131507

PMCID:: PMC4485890

Abstract Article PDF–6.7M

Select item 446045117.

Virus-induced translational arrest through 4EBP1/2-dependent decay of 5′-TOP mRNAs restricts viral infection

Kaycie C. Hopkins, Michael A. Tartell, Christin Herrmann, Brent A. Hackett, Frances Taschuk, Debasis Panda, Sanjay V. Menghani, Leah R. Sabin, Sara Cherry

Proc Natl Acad Sci U S A. 2015 Jun 2; 112(22): E2920–E2929. Published online 2015 May 18. doi: 10.1073/pnas.1418805112

PMCID:: PMC4460451

Abstract Article PDF–1.0M

Select item 317805918.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 298221519.

Multiple mRNA Decapping Enzymes in Mammalian Cells

Man-Gen Song, You Li, Megerditch Kiledjian

Mol Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Mol Cell. 2010 Nov 12; 40(3): 423–432. doi: 10.1016/j.molcel.2010.10.010

PMCID:: PMC2982215

Abstract Article PDF–1.0M

Select item 291973020.

NUDT16 is a (deoxy)inosine diphosphatase, and its deficiency induces accumulation of single-strand breaks in nuclear DNA and growth arrest

Teruaki Iyama, Nona Abolhassani, Daisuke Tsuchimoto, Mari Nonaka, Yusaku Nakabeppu

Nucleic Acids Res. 2010 Aug; 38(14): 4834–4843. Published online 2010 Apr 12. doi: 10.1093/nar/gkq249

PMCID:: PMC2919730

Abstract Article PDF–4.6M

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