PMC Links for GEO Profiles (Select 5935684) - PMC

Links from GEO Profiles

Items: 1 to 20 of 35

<< First< Prev

Page of 2

Next >Last >>

Select item 111133411.

Expanding the roles of chromatin insulators in nuclear architecture, chromatin organization and genome function

Todd Schoborg, Mariano Labrador

Cell Mol Life Sci. 2014 Nov; 71(21): 4089–4113. Published online 2014 Jul 11. doi: 10.1007/s00018-014-1672-6

PMCID:: PMC11113341

Article PDF–887K

Select item 101674792.

Stress‐sensitive dynamics of miRNAs and Elba1 in Drosophila embryogenesis

Lovisa Örkenby, Signe Skog, Helen Ekman, Alessandro Gozzo, Unn Kugelberg, Rashmi Ramesh, Srivathsa Magadi, Gianluca Zambanini, Anna Nordin, Claudio Cantú, Daniel Nätt, Anita Öst

Mol Syst Biol. 2023 May; 19(5): e11148. Published online 2023 Mar 20. doi: 10.15252/msb.202211148

PMCID:: PMC10167479

Article PDF–3.0M

Select item 101057363.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Article PDF–3.2M

Select item 78006064.

The Functions and Mechanisms of Action of Insulators in the Genomes of Higher Eukaryotes

L. S. Melnikova, P. G. Georgiev, A. K. Golovnin

Acta Naturae. 2020 Oct-Dec; 12(4): 15–33. doi: 10.32607/actanaturae.11144

PMCID:: PMC7800606

Article PDF–5.8M

Select item 74659375.

Insights into HP1a-Chromatin Interactions

Silvia Meyer-Nava, Victor E. Nieto-Caballero, Mario Zurita, Viviana Valadez-Graham

Cells. 2020 Aug; 9(8): 1866. Published online 2020 Aug 9. doi: 10.3390/cells9081866

PMCID:: PMC7465937

Article PDF–2.2M

Select item 69110146.

BEN-solo factors partition active chromatin to ensure proper gene activation in Drosophila

Malin Ueberschär, Huazhen Wang, Chun Zhang, Shu Kondo, Tsutomu Aoki, Paul Schedl, Eric C. Lai, Jiayu Wen, Qi Dai

Nat Commun. 2019; 10: 5700. Published online 2019 Dec 13. doi: 10.1038/s41467-019-13558-8

PMCID:: PMC6911014

Article PDF–3.4M

Select item 62165837.

The BEN Domain Protein Insensitive Binds to the Fab-7 Chromatin Boundary To Establish Proper Segmental Identity in Drosophila

Anna Fedotova, Tsutomu Aoki, Mikaël Rossier, Rakesh Kumar Mishra, Chaevia Clendinen, Olga Kyrchanova, Daniel Wolle, Artem Bonchuk, Robert K. Maeda, Annick Mutero, Fabienne Cleard, Vladic Mogila, François Karch, Pavel Georgiev, Paul Schedl

Genetics. 2018 Oct; 210(2): 573–585. Published online 2018 Jun 8. doi: 10.1534/genetics.118.301259

PMCID:: PMC6216583

Article PDF–2.0M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Article PDF–4.0M

Select item 532507710.

Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster

Peter A. Combs, Michael B. Eisen

Version 1. F1000Res. 2017; 6: 41. Published online 2017 Jan 12. doi: 10.12688/f1000research.9720.1

PMCID:: PMC5325077

Article PDF–10M

Select item 528983911.

Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex

Fabienne Cleard, Daniel Wolle, Andrew M. Taverner, Tsutomu Aoki, Girish Deshpande, Peter Andolfatto, Francois Karch, Paul Schedl

Genetics. 2017 Feb; 205(2): 589–603. Published online 2016 Dec 20. doi: 10.1534/genetics.116.195586

PMCID:: PMC5289839

Article PDF–2.5M

Select item 509401112.

Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects: Insect insulator proteins

Thomas Pauli, Lucia Vedder, Daniel Dowling, Malte Petersen, Karen Meusemann, Alexander Donath, Ralph S. Peters, Lars Podsiadlowski, Christoph Mayer, Shanlin Liu, Xin Zhou, Peter Heger, Thomas Wiehe, Lars Hering, Georg Mayer, Bernhard Misof, Oliver Niehuis

BMC Genomics. 2016; 17: 861. Published online 2016 Nov 3. doi: 10.1186/s12864-016-3205-1

PMCID:: PMC5094011

Article PDF–1.0M

Select item 458959913.

Functional Requirements for Fab-7 Boundary Activity in the Bithorax Complex

Daniel Wolle, Fabienne Cleard, Tsutomu Aoki, Girish Deshpande, Paul Schedl, Francois Karch

Mol Cell Biol. 2015 Nov; 35(21): 3739–3752. Prepublished online 2015 Aug 24. Published online 2015 Sep 30. doi: 10.1128/MCB.00456-15

PMCID:: PMC4589599

Article PDF–2.2M

Select item 457928914.

Gene expression profiling of brakeless mutant Drosophila embryos

Filip Crona, Bhumica Singla, Mattias Mannervik

Data Brief. 2015 Dec; 5: 134–137. Published online 2015 Sep 5. doi: 10.1016/j.dib.2015.08.033

PMCID:: PMC4579289

Article PDF–284K

Select item 452833015.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Article PDF–2.2M

Select item 452832916.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Article PDF–4.9M

Select item 435288717.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114