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Select item 108596341.

Protein O-mannosylation: one sugar, several pathways, many functions

Melissa Koff, Pedro Monagas-Valentin, Boris Novikov, Ishita Chandel, Vladislav Panin

Glycobiology. 2023 Nov; 33(11): 911–926. Published online 2023 Aug 11. doi: 10.1093/glycob/cwad067

PMCID:: PMC10859634

Abstract Article PDF–1.6M

Select item 99505322.

Protein tyrosine phosphatase 69D is a substrate of protein O-mannosyltransferases 1-2 that is required for the wiring of sensory axons in Drosophila

Pedro Monagas-Valentin, Robert Bridger, Ishita Chandel, Melissa Koff, Boris Novikov, Patrick Schroeder, Lance Wells, Vladislav Panin

J Biol Chem. 2023 Mar; 299(3): 102890. Published online 2023 Jan 10. doi: 10.1016/j.jbc.2023.102890

PMCID:: PMC9950532

Abstract Article PDF–3.2M

Select item 95438803.

A genome-wide CRISPR screen identifies DPM1 as a modifier of DPAGT1 deficiency and ER stress

Hans M. Dalton, Raghuvir Viswanatha, Roderick Brathwaite, Jr., Jae Sophia Zuno, Alexys R. Berman, Rebekah Rushforth, Stephanie E. Mohr, Norbert Perrimon, Clement Y. Chow

PLoS Genet. 2022 Sep; 18(9): e1010430. Published online 2022 Sep 27. doi: 10.1371/journal.pgen.1010430

PMCID:: PMC9543880

Abstract Article PDF–2.5M

Select item 66710914.

Synaptic Defects in a Drosophila Model of Congenital Muscular Dystrophy

Yogesh P. Wairkar, Lee G. Fradkin, Jasprina N. Noordermeer, Aaron DiAntonio

J Neurosci. 2008 Apr 2; 28(14): 3781–3789. doi: 10.1523/JNEUROSCI.0478-08.2008

PMCID:: PMC6671091

Abstract Article PDF–499K

Select item 66566085.

O-linked glycosylation in Drosophila melanogaster

Liping Zhang, Kelly G. Ten Hagen

Curr Opin Struct Biol. Author manuscript; available in PMC 2020 Jun 1.

Published in final edited form as: Curr Opin Struct Biol. 2019 Jun; 56: 139–145. Published online 2019 Mar 7. doi: 10.1016/j.sbi.2019.01.014

PMCID:: PMC6656608

Abstract Article PDF–440K

Select item 63671356.

Structures and functions of invertebrate glycosylation

Feifei Zhu, Dong Li, Keping Chen

Open Biol. 2019 Jan; 9(1): 180232. Published online 2019 Jan 30. doi: 10.1098/rsob.180232

PMCID:: PMC6367135

Abstract Article PDF–981K

Select item 62723637.

Model Organisms in the Fight against Muscular Dystrophy: Lessons from Drosophila and Zebrafish

Emilie Plantié, Marta Migocka-Patrzałek, Małgorzata Daczewska, Krzysztof Jagla

Molecules. 2015 Apr; 20(4): 6237–6253. Published online 2015 Apr 9. doi: 10.3390/molecules20046237

PMCID:: PMC6272363

Abstract Article PDF–765K

Select item 58154628.

Protein O-Mannosyltransferases Affect Sensory Axon Wiring and Dynamic Chirality of Body Posture in the Drosophila Embryo

Ryan Baker, Naosuke Nakamura, Ishita Chandel, Brooke Howell, Dmitry Lyalin, Vladislav M. Panin

J Neurosci. 2018 Feb 14; 38(7): 1850–1865. doi: 10.1523/JNEUROSCI.0346-17.2017

PMCID:: PMC5815462

Abstract Article PDF–11M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900210.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 488965811.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 480554512.

A genome-wide resource for the analysis of protein localisation in Drosophila

Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer

eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068

PMCID:: PMC4805545

Abstract Article PDF–9.1M

Select item 471103813.

Slowed aging during reproductive dormancy is reflected in genome-wide transcriptome changes in Drosophila melanogaster

Lucie Kučerová, Olga I. Kubrak, Jonas M. Bengtsson, Hynek Strnad, Sören Nylin, Ulrich Theopold, Dick R. Nässel

BMC Genomics. 2016; 17: 50. Published online 2016 Jan 13. doi: 10.1186/s12864-016-2383-1

PMCID:: PMC4711038

Abstract Article PDF–2.8M

Select item 468247614.

Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing

Miki Yamamoto-Hino, Hideki Yoshida, Tomomi Ichimiya, Sho Sakamura, Megumi Maeda, Yoshinobu Kimura, Norihiko Sasaki, Kiyoko F Aoki-Kinoshita, Akiko Kinoshita-Toyoda, Hidenao Toyoda, Ryu Ueda, Shoko Nishihara, Satoshi Goto

Genes Cells. 2015 Jun; 20(6): 521–542. Published online 2015 May 4. doi: 10.1111/gtc.12246

PMCID:: PMC4682476

Abstract Article PDF–1.1M

Select item 456802515.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833016.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832917.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288718.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152719.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 405398920.

Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization

Delphine Menoret, Marc Santolini, Isabelle Fernandes, Rebecca Spokony, Jennifer Zanet, Ignacio Gonzalez, Yvan Latapie, Pierre Ferrer, Hervé Rouault, Kevin P White, Philippe Besse, Vincent Hakim, Stein Aerts, Francois Payre, Serge Plaza

Genome Biol. 2013; 14(8): R86. Published online 2013 Aug 23. doi: 10.1186/gb-2013-14-8-r86

PMCID:: PMC4053989

Abstract Article PDF–2.2M

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