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Select item 96356441.

Enteric bacterial infection in Drosophila induces whole-body alterations in metabolic gene expression independently of the immune deficiency signaling pathway

Rujuta Deshpande, Byoungchun Lee, Savraj S Grewal

G3 (Bethesda) 2022 Nov; 12(11): jkac163. Published online 2022 Jul 4. doi: 10.1093/g3journal/jkac163

PMCID:: PMC9635644

Abstract Article PDF–2.2M

Select item 85111582.

CLOCKWORK ORANGE promotes CLOCK-CYCLE activation via the putative Drosophila ortholog of CLOCK INTERACTING PROTEIN CIRCADIAN

Gustavo B. S. Rivas, Jian Zhou, Christine Merlin, Paul E. Hardin

Curr Biol. Author manuscript; available in PMC 2022 Oct 11.

Published in final edited form as: Curr Biol. 2021 Oct 11; 31(19): 4207–4218.e4. Published online 2021 Jul 30. doi: 10.1016/j.cub.2021.07.017

PMCID:: PMC8511158

Abstract Article PDF–1.9M

Select item 80002783.

Crtc modulates fasting programs associated with 1-C metabolism and inhibition of insulin signaling

Tian Wang, Ezra Wiater, Xinmin Zhang, John B. Thomas, Marc Montminy

Proc Natl Acad Sci U S A. 2021 Mar 23; 118(12): e2024865118. Published online 2021 Mar 15. doi: 10.1073/pnas.2024865118

PMCID:: PMC8000278

Abstract Article PDF–1.7M

Select item 78851204.

Wolbachia and Virus Alter the Host Transcriptome at the Interface of Nucleotide Metabolism Pathways

Amelia R. I. Lindsey, Tamanash Bhattacharya, Richard W. Hardy, Irene L. G. Newton

mBio. 2021 Jan-Feb; 12(1): e03472-20. Published online 2021 Feb 9. doi: 10.1128/mBio.03472-20

PMCID:: PMC7885120

Abstract Article PDF–3.5M

Select item 69615785.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 67580546.

Genome-Wide Expression Analysis in DrosophilaReveals Genes Controlling Circadian Behavior

M. Fernanda Ceriani, John B. Hogenesch, Marcelo Yanovsky, Satchidananda Panda, Martin Straume, Steve A. Kay

J Neurosci. 2002 Nov 1; 22(21): 9305–9319. doi: 10.1523/JNEUROSCI.22-21-09305.2002

PMCID:: PMC6758054

Abstract Article PDF–406K

Select item 63430447.

Towards comprehensive annotation of Drosophila melanogaster enzymes in FlyBase

Phani V Garapati, Jingyao Zhang, Alix J Rey, Steven J Marygold

Database (Oxford) 2019; 2019: bay144. Published online 2019 Jan 23. doi: 10.1093/database/bay144

PMCID:: PMC6343044

Abstract Article PDF–13M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 492804710.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 492686411.

Tissue-specific down-regulation of S-adenosyl-homocysteine via suppression of dAhcyL1/dAhcyL2 extends health span and life span in Drosophila

Andrey A. Parkhitko, Richard Binari, Nannan Zhang, John M. Asara, Fabio Demontis, Norbert Perrimon

Genes Dev. 2016 Jun 15; 30(12): 1409–1422. doi: 10.1101/gad.282277.116

PMCID:: PMC4926864

Abstract Article PDF–1.4M

Select item 480137012.

The pugilist^Dominant Mutation of Drosophila melanogaster: A Simple-Sequence Repeat Disorder Reveals Localized Transport in the Eye

Yikang S. Rong, Mary M. Golic, Kent G. Golic

PLoS One. 2016; 11(3): e0151377. Published online 2016 Mar 21. doi: 10.1371/journal.pone.0151377

PMCID:: PMC4801370

Abstract Article PDF–6.4M

Select item 478811613.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

Select item 476848714.

Zfrp8 forms a complex with Fragile-X Mental Retardation Protein and regulates its localization and function

William Tan, Curtis Schauder, Tatyana Naryshkina, Svetlana Minakhina, Ruth Steward

Dev Biol. Author manuscript; available in PMC 2017 Feb 15.

Published in final edited form as: Dev Biol. 2016 Feb 15; 410(2): 202–212. Published online 2016 Jan 7. doi: 10.1016/j.ydbio.2015.12.008

PMCID:: PMC4768487

Abstract Article PDF–2.2M

Select item 473800515.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 473054816.

WAC regulates mTOR activity by acting as an adaptor for the TTT and Pontin/Reptin complexes

Gabriela David-Morrison, Zhen Xu, Yan-Ning Rui, Wu-Lin Charng, Manish Jaiswal, Shinya Yamamoto, Bo Xiong, Ke Zhang, Hector Sandoval, Lita Duraine, Zhongyuan Zuo, Sheng Zhang, Hugo J. Bellen

Dev Cell. Author manuscript; available in PMC 2017 Jan 25.

Published in final edited form as: Dev Cell. 2016 Jan 25; 36(2): 139–151. doi: 10.1016/j.devcel.2015.12.019

PMCID:: PMC4730548

Abstract Article PDF–3.5M

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 449921119.

Drosophila anti-nematode and antibacterial immune regulators revealed by RNA-Seq

Julio C. Castillo, Todd Creasy, Priti Kumari, Amol Shetty, Upasana Shokal, Luke J. Tallon, Ioannis Eleftherianos

BMC Genomics. 2015; 16(1): 519. Published online 2015 Jul 11. doi: 10.1186/s12864-015-1690-2

PMCID:: PMC4499211

Abstract Article PDF–2.7M

Select item 435288720.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

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