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Select item 109077001.

Baf-mediated transcriptional regulation of teashirt is essential for the development of neural progenitor cell lineages

Byung Su Ko, Myeong Hoon Han, Min Jee Kwon, Dong Gon Cha, Yuri Ji, Eun Seo Park, Min Jae Jeon, Somi Kim, Kyeongho Lee, Yoon Ha Choi, Jusung Lee, Monica Torras-Llort, Ki-Jun Yoon, Hyosang Lee, Jong Kyoung Kim, Sung Bae Lee

Exp Mol Med. 2024 Feb; 56(2): 422–440. Published online 2024 Feb 19. doi: 10.1038/s12276-024-01169-3

PMCID:: PMC10907700

Abstract Article PDF–7.5M

Select item 108987402.

Comparative exploration of mammalian deafness gene homologues in the Drosophila auditory organ shows genetic correlation between insect and vertebrate hearing

Daniel C. Sutton, Jonathan C. Andrews, Dylan M. Dolezal, Ye Jin Park, Hongjie Li, Daniel F. Eberl, Shinya Yamamoto, Andrew K. Groves

PLoS One. 2024; 19(2): e0297846. Published online 2024 Feb 27. doi: 10.1371/journal.pone.0297846

PMCID:: PMC10898740

Abstract Article PDF–2.8M

Select item 108717013.

The Density of Regulatory Information Is a Major Determinant of Evolutionary Constraint on Noncoding DNA in Drosophila

Gonzalo Sabarís, Daniela M Ortíz, Ian Laiker, Ignacio Mayansky, Sujay Naik, Giacomo Cavalli, David L Stern, Ella Preger-Ben Noon, Nicolás Frankel

Mol Biol Evol. 2024 Feb; 41(2): msae004. Published online 2024 Feb 13. doi: 10.1093/molbev/msae004

PMCID:: PMC10871701

Abstract Article PDF–12M

Select item 106591624.

MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images

Yuyang Huang, Gufeng Yu, Yang Yang

PLoS Comput Biol. 2023 Nov; 19(11): e1011623. Published online 2023 Nov 8. doi: 10.1371/journal.pcbi.1011623

PMCID:: PMC10659162

Abstract Article PDF–2.4M

Select item 103357075.

A single-cell atlas of the sexually dimorphic Drosophila foreleg and its sensory organs during development

Ben R. Hopkins, Olga Barmina, Artyom Kopp

PLoS Biol. 2023 Jun; 21(6): e3002148. Published online 2023 Jun 28. doi: 10.1371/journal.pbio.3002148

PMCID:: PMC10335707

Abstract Article PDF–5.4M

Select item 102438766.

Transcriptional and Epigenetic Regulation of Temporal Patterning in Neural Progenitors

Alokananda Ray, Hailun Zhu, Andrew Ding, Xin Li

Dev Biol. Author manuscript; available in PMC 2023 Jun 6.

Published in final edited form as: Dev Biol. 2022 Jan; 481: 116–128. Published online 2021 Oct 16. doi: 10.1016/j.ydbio.2021.10.006

PMCID:: PMC10243876

Abstract Article PDF–1.2M

Select item 101950807.

Origin of wiring specificity in an olfactory map revealed by neuron type–specific, time-lapse imaging of dendrite targeting

Kenneth Kin Lam Wong, Tongchao Li, Tian-Ming Fu, Gaoxiang Liu, Cheng Lyu, Sayeh Kohani, Qijing Xie, David J Luginbuhl, Srigokul Upadhyayula, Eric Betzig, Liqun Luo

eLife. 2023; 12: e85521. Published online 2023 Mar 28. doi: 10.7554/eLife.85521

PMCID:: PMC10195080

Abstract Article PDF–13M

Select item 101057368.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 100938529.

Wds-Mediated H3K4me3 Modification Regulates Lipid Synthesis and Transport in Drosophila

Tujing Zhao, Min Wang, Zheng Li, Hao Li, Dongqin Yuan, Xing Zhang, Mengge Guo, Wenliang Qian, Daojun Cheng

Int J Mol Sci. 2023 Apr; 24(7): 6125. Published online 2023 Mar 24. doi: 10.3390/ijms24076125

PMCID:: PMC10093852

Abstract Article PDF–7.1M

Select item 996897810.

Characterisation of the role and regulation of Ultrabithorax in sculpting fine-scale leg morphology

Alexandra D. Buffry, Sebastian Kittelmann, Alistair P. McGregor

Front Cell Dev Biol. 2023; 11: 1119221. Published online 2023 Feb 13. doi: 10.3389/fcell.2023.1119221

PMCID:: PMC9968978

Abstract Article PDF–4.1M

Select item 909726011.

Single-nucleus transcriptomes reveal evolutionary and functional properties of cell types in the Drosophila accessory gland

Alex C Majane, Julie M Cridland, David J Begun

Genetics. 2022 Feb; 220(2): iyab213. Published online 2021 Nov 25. doi: 10.1093/genetics/iyab213

PMCID:: PMC9097260

Abstract Article PDF–3.3M

Select item 907425612.

A complete temporal transcription factor series in the fly visual system

Nikolaos Konstantinides, Isabel Holguera, Anthony M. Rossi, Aristides Escobar, Liébaut Dudragne, Yen-Chung Chen, Thinh Tran, Azalia Martinez Jaimes, Mehmet Neset Özel, Félix Simon, Zhiping Shao, Nadejda M. Tsankova, John F. Fullard, Uwe Walldorf, Panos Roussos, Claude Desplan

Nature. Author manuscript; available in PMC 2022 Oct 6.

Published in final edited form as: Nature. 2022 Apr; 604(7905): 316–322. Published online 2022 Apr 6. doi: 10.1038/s41586-022-04564-w

PMCID:: PMC9074256

Abstract Article PDF–5.5M

Select item 888344313.

Single‐cell RNA sequencing of motoneurons identifies regulators of synaptic wiring in Drosophila embryos

Jessica Velten, Xuefan Gao, Patrick Van Nierop y Sanchez, Katrin Domsch, Rashi Agarwal, Lena Bognar, Malte Paulsen, Lars Velten, Ingrid Lohmann

Mol Syst Biol. 2022 Mar; 18(3): e10255. Published online 2022 Feb 28. doi: 10.15252/msb.202110255

PMCID:: PMC8883443

Abstract Article PDF–3.0M

Select item 886329714.

Transcriptional Regulators of Ecdysteroid Biosynthetic Enzymes and Their Roles in Insect Development

Takumi Kamiyama, Ryusuke Niwa

Front Physiol. 2022; 13: 823418. Published online 2022 Feb 8. doi: 10.3389/fphys.2022.823418

PMCID:: PMC8863297

Abstract Article PDF–1.4M

Select item 866448615.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 841796916.

Stop codon readthrough alters the activity of a POU/Oct transcription factor during Drosophila development

Yunpo Zhao, Bo Gustav Lindberg, Shiva Seyedoleslami Esfahani, Xiongzhuo Tang, Stefano Piazza, Ylva Engström

BMC Biol. 2021; 19: 185. Published online 2021 Sep 3. doi: 10.1186/s12915-021-01106-0

PMCID:: PMC8417969

Abstract Article PDF–7.9M

Select item 835713617.

Identification of conserved transcriptome features between humans and Drosophila in the aging brain utilizing machine learning on combined data from the NIH Sequence Read Archive

Joe L. Webb, Simon M. Moe, Andrew K. Bolstad, Elizabeth M. McNeill

PLoS One. 2021; 16(8): e0255085. Published online 2021 Aug 11. doi: 10.1371/journal.pone.0255085

PMCID:: PMC8357136

Abstract Article PDF–1.9M

Select item 813928718.

The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis

Nigel S. Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y. Shen, Logan A. Walker, Wenjia Cao, Cheng-Yu Lee, Dawen Cai

Cell Rep. Author manuscript; available in PMC 2021 May 21.

Published in final edited form as: Cell Rep. 2021 Apr 27; 35(4): 109039. doi: 10.1016/j.celrep.2021.109039

PMCID:: PMC8139287

Abstract Article PDF–1.6M

Select item 787014519.

Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons

Qijing Xie, Maria Brbic, Felix Horns, Sai Saroja Kolluru, Robert C Jones, Jiefu Li, Anay R Reddy, Anthony Xie, Sayeh Kohani, Zhuoran Li, Colleen N McLaughlin, Tongchao Li, Chuanyun Xu, David Vacek, David J Luginbuhl, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63450. Published online 2021 Jan 11. doi: 10.7554/eLife.63450

PMCID:: PMC7870145

Abstract Article PDF–13M

Select item 782618820.

Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species

Joanna F D Hagen, Cláudia C Mendes, Shamma R Booth, Javier Figueras Jimenez, Kentaro M Tanaka, Franziska A Franke, Luis Baudouin-Gonzalez, Amber M Ridgway, Saad Arif, Maria D S Nunes, Alistair P McGregor

Mol Biol Evol. 2021 Feb; 38(2): 437–448. Published online 2020 Sep 15. doi: 10.1093/molbev/msaa232

Correction in:: Mol Biol Evol. 2022 Oct; 39(10): msac207.

PMCID:: PMC7826188

Abstract Article PDF–648K

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