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Items: 11

1.
Inferring gene function from evolutionary change in signatures of translation efficiency
Anita Krisko, Tea Copic, Toni Gabaldón, Ben Lehner, Fran Supek
Genome Biol. 2014; 15(3): R44. Published online 2014 Mar 3. doi: 10.1186/gb-2014-15-3-r44
PMCID:
PMC4054840
AbstractArticlePDF–2.2M
2.
Prediction of lipoprotein signal peptides in Gram-negative bacteria
Agnieszka S. Juncker, Hanni Willenbrock, Gunnar von Heijne, Søren Brunak, Henrik Nielsen, Anders Krogh
Protein Sci. 2003 Aug; 12(8): 1652–1662. doi: 10.1110/ps.0303703
PMCID:
PMC2323952
AbstractArticlePDF–330K
3.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
4.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
5.
Conserved and Variable Functions of the σE Stress Response in Related Genomes
Virgil A Rhodius, Won Chul Suh, Gen Nonaka, Joyce West, Carol A Gross
PLoS Biol. 2006 Jan; 4(1): e2. Published online 2005 Dec 20. doi: 10.1371/journal.pbio.0040002
PMCID:
PMC1312014
AbstractArticlePDF–575K
6.
The rpoE gene encoding the sigma E (sigma 24) heat shock sigma factor of Escherichia coli.
S Raina, D Missiakas, C Georgopoulos
EMBO J. 1995 Mar 1; 14(5): 1043–1055. doi: 10.1002/j.1460-2075.1995.tb07085.x
PMCID:
PMC398177
SummaryPage BrowsePDF–3.0M
7.
YaeL (EcfE) activates the σE pathway of stress response through a site-2 cleavage of anti-σE, RseA
Kazue Kanehara, Koreaki Ito, Yoshinori Akiyama
Genes Dev. 2002 Aug 15; 16(16): 2147–2155. doi: 10.1101/gad.1002302
PMCID:
PMC186437
AbstractArticlePDF–188K
8.
DegS and YaeL participate sequentially in the cleavage of RseA to activate the σE-dependent extracytoplasmic stress response
Benjamin M. Alba, Jennifer A. Leeds, Christina Onufryk, Chi Zen Lu, Carol A. Gross
Genes Dev. 2002 Aug 15; 16(16): 2156–2168. doi: 10.1101/gad.1008902
PMCID:
PMC186436
AbstractArticlePDF–222K
9.
Evidence that rseC, a gene in the rpoE cluster, has a role in thiamine synthesis in Salmonella typhimurium.
B J Beck, L E Connolly, A De Las Peñas, D M Downs
J Bacteriol. 1997 Oct; 179(20): 6504–6508. doi: 10.1128/jb.179.20.6504-6508.1997
PMCID:
PMC179570
SummaryPDF–638K
10.
A reducing system of the superoxide sensor SoxR in Escherichia coli
Mi-Sun Koo, Joon-Hee Lee, So-Yeon Rah, Won-Sik Yeo, Jin-Won Lee, Kang-Lok Lee, Young-Sang Koh, Sa-Ouk Kang, Jung-Hye Roe
EMBO J. 2003 Jun 2; 22(11): 2614–2622. doi: 10.1093/emboj/cdg252
PMCID:
PMC156749
AbstractArticlePDF–282K
11.
Function of the ςE Regulon in Dead-Cell Lysis in Stationary-Phase Escherichia coli
Takeshi Nitta, Hiroshi Nagamitsu, Masayuki Murata, Hanae Izu, Mamoru Yamada
J Bacteriol. 2000 Sep; 182(18): 5231–5237. doi: 10.1128/jb.182.18.5231-5237.2000
PMCID:
PMC94674
AbstractArticlePDF–1.8M

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