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Select item 111133411.

Expanding the roles of chromatin insulators in nuclear architecture, chromatin organization and genome function

Todd Schoborg, Mariano Labrador

Cell Mol Life Sci. 2014 Nov; 71(21): 4089–4113. Published online 2014 Jul 11. doi: 10.1007/s00018-014-1672-6

PMCID:: PMC11113341

Abstract Article PDF–887K

Select item 111085652.

The ecdysone receptor signalling regulates microvilli formation in follicular epithelial cells

Patrizia Romani, Giuseppe Gargiulo, Valeria Cavaliere

Cell Mol Life Sci. 2016 Jan; 73(2): 409–425. Published online 2015 Jul 30. doi: 10.1007/s00018-015-1999-7

PMCID:: PMC11108565

Abstract Article PDF–12M

Select item 111050253.

Post-transcriptional regulation of insect metamorphosis and oogenesis

Jiasheng Song, Shutang Zhou

Cell Mol Life Sci. 2020 May; 77(10): 1893–1909. Published online 2019 Nov 13. doi: 10.1007/s00018-019-03361-5

PMCID:: PMC11105025

Abstract Article PDF–2.9M

Select item 109660324.

Cell-fate conversion of intestinal cells in adult Drosophila midgut by depleting a single transcription factor

Xingting Guo, Chenhui Wang, Yongchao Zhang, Ruxue Wei, Rongwen Xi

Nat Commun. 2024; 15: 2656. Published online 2024 Mar 26. doi: 10.1038/s41467-024-46956-8

PMCID:: PMC10966032

Abstract Article PDF–11M

Select item 106930665.

Transcriptome analysis reveals temporally regulated genetic networks during Drosophila border cell collective migration

Emily Burghardt, Jessica Rakijas, Antariksh Tyagi, Pralay Majumder, Bradley J.S.C. Olson, Jocelyn A. McDonald

BMC Genomics. 2023; 24: 728. Published online 2023 Dec 1. doi: 10.1186/s12864-023-09839-8

PMCID:: PMC10693066

Abstract Article PDF–12M

Select item 106591626.

MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images

Yuyang Huang, Gufeng Yu, Yang Yang

PLoS Comput Biol. 2023 Nov; 19(11): e1011623. Published online 2023 Nov 8. doi: 10.1371/journal.pcbi.1011623

PMCID:: PMC10659162

Abstract Article PDF–2.4M

Select item 105780037.

The evolution and mutational robustness of chromatin accessibility in Drosophila

Samuel Khodursky, Eric B. Zheng, Nicolas Svetec, Sylvia M. Durkin, Sigi Benjamin, Alice Gadau, Xia Wu, Li Zhao

Genome Biol. 2023; 24: 232. Published online 2023 Oct 16. doi: 10.1186/s13059-023-03079-5

PMCID:: PMC10578003

Abstract Article PDF–5.2M

Select item 104827008.

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Carmen Bravo González-Blas, Seppe De Winter, Gert Hulselmans, Nikolai Hecker, Irina Matetovici, Valerie Christiaens, Suresh Poovathingal, Jasper Wouters, Sara Aibar, Stein Aerts

Nat Methods. 2023; 20(9): 1355–1367. Published online 2023 Jul 13. doi: 10.1038/s41592-023-01938-4

PMCID:: PMC10482700

Abstract Article PDF–27M

Select item 102282809.

Sites of transcription initiation drive mRNA isoform selection

Carlos Alfonso-Gonzalez, Ivano Legnini, Sarah Holec, Laura Arrigoni, Hasan Can Ozbulut, Fernando Mateos, David Koppstein, Agnieszka Rybak-Wolf, Ulrike Bönisch, Nikolaus Rajewsky, Valérie Hilgers

Cell. 2023 May 25; 186(11): 2438–2455.e22. doi: 10.1016/j.cell.2023.04.012

PMCID:: PMC10228280

Abstract Article

Select item 1010573610.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 1007408611.

NuRD‐independent Mi‐2 activity represses ectopic gene expression during neuronal maturation

Gabriel N Aughey, Elhana Forsberg, Krista Grimes, Shen Zhang, Tony D Southall

EMBO Rep. 2023 Apr; 24(4): e55362. Published online 2023 Feb 1. doi: 10.15252/embr.202255362

PMCID:: PMC10074086

Abstract Article PDF–2.3M

Select item 1006777912.

Molecular mechanisms of neurite regeneration and repair: insights from C. elegans and Drosophila

Xiaofan Liu, Yuqing Zhao, Wei Zou

Cell Regen. 2023 Dec; 12: 12. Published online 2023 Apr 2. doi: 10.1186/s13619-022-00155-2

PMCID:: PMC10067779

Abstract Article PDF–1.2M

Select item 996790613.

Noncoding RNA Regulation of Hormonal and Metabolic Systems in the Fruit Fly Drosophila

Ki-Kei Chan, Ting-Fung Chan, William Bendena, Jerome H. L. Hui

Metabolites. 2023 Feb; 13(2): 152. Published online 2023 Jan 19. doi: 10.3390/metabo13020152

PMCID:: PMC9967906

Abstract Article PDF–784K

Select item 973313014.

Discovery and Visualization of Age-Dependent Patterns in the Diurnal Transcriptome of Drosophila

Benjamin Sebastian, Rosalyn M. Fey, Patrick Morar, Brittany Lasher, Jadwiga M. Giebultowicz, David A. Hendrix

J Circadian Rhythms. 2022; 20: 1. Published online 2022 Dec 8. doi: 10.5334/jcr.218

PMCID:: PMC9733130

Abstract Article PDF–9.0M

Select item 963565515.

A TRiP RNAi screen to identify molecules necessary for Drosophila photoreceptor differentiation

Johnathan Rylee, Simpla Mahato, John Aldrich, Emma Bergh, Brandon Sizemore, Lauren E Feder, Shaun Grega, Kennedy Helms, Megan Maar, Steven G Britt, Andrew C Zelhof

G3 (Bethesda) 2022 Nov; 12(11): jkac257. Published online 2022 Oct 11. doi: 10.1093/g3journal/jkac257

PMCID:: PMC9635655

Abstract Article PDF–1.6M

Select item 947454516.

Mettl3-dependent m⁶A modification attenuates the brain stress response in Drosophila

Alexandra E. Perlegos, Emily J. Shields, Hui Shen, Kathy Fange Liu, Nancy M. Bonini

Nat Commun. 2022; 13: 5387. Published online 2022 Sep 14. doi: 10.1038/s41467-022-33085-3

PMCID:: PMC9474545

Abstract Article PDF–2.7M

Select item 945115917.

Variant Polycomb complexes in Drosophila consistent with ancient functional diversity

Hyuckjoon Kang, Janel R. Cabrera, Barry M. Zee, Heather A. Kang, Jenny Marie Jobe, Maeve B. Hegarty, Aurelie E. Barry, Alexander Glotov, Yuri B. Schwartz, Mitzi I. Kuroda

Sci Adv. 2022 Sep; 8(36): eadd0103. Published online 2022 Sep 7. doi: 10.1126/sciadv.add0103

PMCID:: PMC9451159

Abstract Article PDF–1.3M

Select item 940464618.

A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages

Marc Corrales, Benjamin T. Cocanougher, Andrea B. Kohn, Jason D. Wittenbach, Xi S. Long, Andrew Lemire, Albert Cardona, Robert H. Singer, Leonid L. Moroz, Marta Zlatic

Neural Dev. 2022; 17: 8. Published online 2022 Aug 24. doi: 10.1186/s13064-022-00164-6

Correction in:: Neural Dev. 2022; 17: 11.

PMCID:: PMC9404646

Abstract Article PDF–4.1M

Select item 933649519.

Chromatin and transcriptomic profiling uncover dysregulation of the Tip60 HAT/HDAC2 epigenomic landscape in the neurodegenerative brain

Mariah Beaver, Bhanu Chandra Karisetty, Haolin Zhang, Akanksha Bhatnagar, Ellen Armour, Visha Parmar, Reshma Brown, Merry Xiang, Felice Elefant

Epigenetics. 2022; 17(7): 786–807. Published online 2021 Aug 9. doi: 10.1080/15592294.2021.1959742

PMCID:: PMC9336495

Abstract Article PDF–3.5M

Select item 881529720.

GAGA factor: a multifunctional pioneering chromatin protein

Darya Chetverina, Maksim Erokhin, Paul Schedl

Cell Mol Life Sci. 2021 May; 78(9): 4125–4141. Published online 2021 Feb 2. doi: 10.1007/s00018-021-03776-z

PMCID:: PMC8815297

Abstract Article PDF–3.5M

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