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Items: 1 to 20 of 44

1.
Dopaminergic systems create reward seeking despite adverse consequences
Kristijan D. Jovanoski, Lucille Duquenoy, Jessica Mitchell, Ishaan Kapoor, Christoph D. Treiber, Vincent Croset, Georgia Dempsey, Sai Parepalli, Paola Cognigni, Nils Otto, Johannes Felsenberg, Scott Waddell
Nature. 2023; 623(7986): 356–365. Published online 2023 Oct 25. doi: 10.1038/s41586-023-06671-8
Correction in:
Nature. 2023; 624(7991): E5.
PMCID:
PMC10632144
AbstractArticlePDF–10M
2.
Using single-cell RNA sequencing to generate predictive cell-type-specific split-GAL4 reagents throughout development
Yu-Chieh David Chen, Yen-Chung Chen, Raghuvanshi Rajesh, Nathalie Shoji, Maisha Jacy, Haluk Lacin, Ted Erclik, Claude Desplan
Proc Natl Acad Sci U S A. 2023 Aug 8; 120(32): e2307451120. Published online 2023 Jul 31. doi: 10.1073/pnas.2307451120
PMCID:
PMC10410749
AbstractArticlePDF–4.8M
3.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
4.
Maintenance of mitochondrial integrity in midbrain dopaminergic neurons governed by a conserved developmental transcription factor
Federico Miozzo, Eva P. Valencia-Alarcón, Luca Stickley, Michaëla Majcin Dorcikova, Francesco Petrelli, Damla Tas, Nicolas Loncle, Irina Nikonenko, Peter Bou Dib, Emi Nagoshi
Nat Commun. 2022; 13: 1426. Published online 2022 Mar 17. doi: 10.1038/s41467-022-29075-0
PMCID:
PMC8931002
AbstractArticlePDF–6.9M
5.
The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis
Nigel S. Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y. Shen, Logan A. Walker, Wenjia Cao, Cheng-Yu Lee, Dawen Cai
Cell Rep. Author manuscript; available in PMC 2021 May 21.
Published in final edited form as: Cell Rep. 2021 Apr 27; 35(4): 109039. doi: 10.1016/j.celrep.2021.109039
PMCID:
PMC8139287
AbstractArticlePDF–1.6M
6.
Single-cell RNA sequencing in Drosophila: Technologies and applications
Hongjie Li
Wiley Interdiscip Rev Dev Biol. Author manuscript; available in PMC 2021 Sep 1.
Published in final edited form as: Wiley Interdiscip Rev Dev Biol. 2021 Sep; 10(5): e396. Published online 2020 Sep 16. doi: 10.1002/wdev.396
PMCID:
PMC7960577
AbstractArticlePDF–1.1M
7.
Defective minor spliceosomes induce SMA-associated phenotypes through sensitive intron-containing neural genes in Drosophila
Liang Li, Zhan Ding, Ting-Lin Pang, Bei Zhang, Chen-Hui Li, An-Min Liang, Yu-Ru Wang, Yu Zhou, Yu-Jie Fan, Yong-Zhen Xu
Nat Commun. 2020; 11: 5608. Published online 2020 Nov 5. doi: 10.1038/s41467-020-19451-z
PMCID:
PMC7644725
AbstractArticlePDF–3.0M
8.
Interactions between the microbiome and mating influence the female’s transcriptional profile in Drosophila melanogaster
Sofie Y. N. Delbare, Yasir H. Ahmed-Braimah, Mariana F. Wolfner, Andrew G. Clark
Sci Rep. 2020; 10: 18168. Published online 2020 Oct 23. doi: 10.1038/s41598-020-75156-9
PMCID:
PMC7584617
AbstractArticlePDF–2.2M
9.
A Comprehensive Drosophila melanogaster Transcription Factor Interactome
Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk
Cell Rep. Author manuscript; available in PMC 2019 Apr 26.
Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071
PMCID:
PMC6485956
AbstractArticlePDF–1.6M
10.
Iron deficiency reduces synapse formation in the Drosophila clock circuit
Samuel S. Rudisill, Bradley R. Martin, Kevin M. Mankowski, Charles R. Tessier
Biol Trace Elem Res. Author manuscript; available in PMC 2020 May 1.
Published in final edited form as: Biol Trace Elem Res. 2019 May; 189(1): 241–250. Published online 2018 Jul 18. doi: 10.1007/s12011-018-1442-7
PMCID:
PMC6338522
AbstractArticlePDF–279K
11.
Cellular diversity in the Drosophila midbrain revealed by single-cell transcriptomics
Vincent Croset, Christoph D Treiber, Scott Waddell
eLife. 2018; 7: e34550. Published online 2018 Apr 19. doi: 10.7554/eLife.34550
PMCID:
PMC5927767
AbstractArticlePDF–6.7M
12.
Parallel roles of transcription factors dFOXO and FER2 in the development and maintenance of dopaminergic neurons
Damla Tas, Luca Stickley, Federico Miozzo, Rafael Koch, Nicolas Loncle, Virginie Sabado, Bettina Gnägi, Emi Nagoshi
PLoS Genet. 2018 Mar; 14(3): e1007271. Published online 2018 Mar 12. doi: 10.1371/journal.pgen.1007271
PMCID:
PMC5864087
AbstractArticlePDF–9.2M
13.
Phylogenetic and expression analysis of the basic helix-loop-helix transcription factor gene family: genomic approach to cellular differentiation
Jeffrey D. Stevens, Eric H. Roalson, Michael K. Skinner
Differentiation. Author manuscript; available in PMC 2017 Dec 13.
Published in final edited form as: Differentiation. 2008 Nov; 76(9): 1006–1022. Published online 2008 Jun 4. doi: 10.1111/j.1432-0436.2008.00285.x
PMCID:
PMC5728086
AbstractArticlePDF–2.4M
14.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
15.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
16.
A genome-wide resource for the analysis of protein localisation in Drosophila
Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer
eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068
PMCID:
PMC4805545
AbstractArticlePDF–9.1M
17.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
18.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
19.
Drosophila glucome screening identifies Ck1alpha as a regulator of mammalian glucose metabolism
Rupali Ugrankar, Eric Berglund, Fatih Akdemir, Christopher Tran, Min Soo Kim, Jungsik Noh, Rebekka Schneider, Benjamin Ebert, Jonathan M. Graff
Nat Commun. 2015; 6: 7102. Published online 2015 May 21. doi: 10.1038/ncomms8102
PMCID:
PMC4455130
AbstractArticlePDF–696K
20.
A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development
Claus Schertel, Monica Albarca, Claudia Rockel-Bauer, Nicholas W. Kelley, Johannes Bischof, Korneel Hens, Erik van Nimwegen, Konrad Basler, Bart Deplancke
Genome Res. 2015 Apr; 25(4): 514–523. doi: 10.1101/gr.181305.114
PMCID:
PMC4381523
AbstractArticlePDF–700K

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