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Items: 1 to 20 of 66

1.
The N-Terminal Part of Drosophila CP190 Is a Platform for Interaction with Multiple Architectural Proteins
Anton Golovnin, Larisa Melnikova, Valentin Babosha, Galina V. Pokholkova, Ivan Slovohotov, Anastasia Umnova, Oksana Maksimenko, Igor F. Zhimulev, Pavel Georgiev
Int J Mol Sci. 2023 Nov; 24(21): 15917. Published online 2023 Nov 2. doi: 10.3390/ijms242115917
PMCID:
PMC10648081
AbstractArticlePDF–5.5M
2.
3D chromatin interactions involving Drosophila insulators are infrequent but preferential and arise before TADs and transcription
Olivier Messina, Flavien Raynal, Julian Gurgo, Jean-Bernard Fiche, Vera Pancaldi, Marcelo Nollmann
Nat Commun. 2023; 14: 6678. Published online 2023 Oct 21. doi: 10.1038/s41467-023-42485-y
PMCID:
PMC10590426
AbstractArticlePDF–3.6M
3.
Mechanisms of Interaction between Enhancers and Promoters in Three Drosophila Model Systems
Olga Kyrchanova, Vladimir Sokolov, Pavel Georgiev
Int J Mol Sci. 2023 Feb; 24(3): 2855. Published online 2023 Feb 2. doi: 10.3390/ijms24032855
PMCID:
PMC9917889
AbstractArticlePDF–2.2M
4.
Mechanisms of enhancer-promoter communication and chromosomal architecture in mammals and Drosophila
Olga V. Kyrchanova, Oleg V. Bylino, Pavel G. Georgiev
Front Genet. 2022; 13: 1081088. Published online 2022 Dec 1. doi: 10.3389/fgene.2022.1081088
PMCID:
PMC9751008
AbstractArticlePDF–975K
5.
Essential role of Cp190 in physical and regulatory boundary formation
Anjali Kaushal, Julien Dorier, Bihan Wang, Giriram Mohana, Michael Taschner, Pascal Cousin, Patrice Waridel, Christian Iseli, Anastasiia Semenova, Simon Restrepo, Nicolas Guex, Erez Lieberman Aiden, Maria Cristina Gambetta
Sci Adv. 2022 May; 8(19): eabl8834. Published online 2022 May 13. doi: 10.1126/sciadv.abl8834
PMCID:
PMC9106302
AbstractArticlePDF–8.3M
6.
Mechanisms of CP190 Interaction with Architectural Proteins in Drosophila Melanogaster
Marat Sabirov, Anastasia Popovich, Konstantin Boyko, Alena Nikolaeva, Olga Kyrchanova, Oksana Maksimenko, Vladimir Popov, Pavel Georgiev, Artem Bonchuk
Int J Mol Sci. 2021 Nov; 22(22): 12400. Published online 2021 Nov 17. doi: 10.3390/ijms222212400
PMCID:
PMC8618245
AbstractArticlePDF–2.0M
7.
Redundant enhancers in the iab-5 domain cooperatively activate Abd-B in the A5 and A6 abdominal segments of Drosophila
Nikolay Postika, Paul Schedl, Pavel Georgiev, Olga Kyrchanova
Development. 2021 Oct 1; 148(19): dev199827. Published online 2021 Sep 24. doi: 10.1242/dev.199827
PMCID:
PMC8497775
AbstractArticle
8.
Multi-Scale Organization of the Drosophila melanogaster Genome
Samantha C. Peterson, Kaylah B. Samuelson, Stacey L. Hanlon
Genes (Basel) 2021 Jun; 12(6): 817. Published online 2021 May 27. doi: 10.3390/genes12060817
PMCID:
PMC8228293
AbstractArticlePDF–1.0M
9.
Boundaries potentiate polycomb response element-mediated silencing
Maksim Erokhin, Fedor Gorbenko, Dmitry Lomaev, Marina Yu Mazina, Anna Mikhailova, Azat K. Garaev, Aleksander Parshikov, Nadezhda E. Vorobyeva, Pavel Georgiev, Paul Schedl, Darya Chetverina
BMC Biol. 2021; 19: 113. Published online 2021 Jun 2. doi: 10.1186/s12915-021-01047-8
PMCID:
PMC8170967
AbstractArticlePDF–5.9M
10.
CTCF As an Example of DNA-Binding Transcription Factors Containing Clusters of C2H2-Type Zinc Fingers
O. G. Maksimenko, D. V. Fursenko, E. V. Belova, P. G. Georgiev
Acta Naturae. 2021 Jan-Mar; 13(1): 31–46. doi: 10.32607/actanaturae.11206
PMCID:
PMC8084297
AbstractArticlePDF–773K
11.
An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells
Laura Shapiro-Kulnane, Oscar Bautista, Helen K Salz
G3 (Bethesda) 2021 Jan; 11(1): jkaa016. Published online 2020 Dec 7. doi: 10.1093/g3journal/jkaa016
PMCID:
PMC8022714
AbstractArticlePDF–578K
12.
Mechanism and functional role of the interaction between CP190 and the architectural protein Pita in Drosophila melanogaster
Marat Sabirov, Olga Kyrchanova, Galina V. Pokholkova, Artem Bonchuk, Natalia Klimenko, Elena Belova, Igor F. Zhimulev, Oksana Maksimenko, Pavel Georgiev
Epigenetics Chromatin. 2021; 14: 16. Published online 2021 Mar 22. doi: 10.1186/s13072-021-00391-x
PMCID:
PMC7983404
AbstractArticlePDF–3.7M
13.
Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila
Artem Bonchuk, Konstantin Boyko, Anna Fedotova, Alena Nikolaeva, Sofya Lushchekina, Anastasia Khrustaleva, Vladimir Popov, Pavel Georgiev
Nucleic Acids Res. 2021 Feb 26; 49(4): 2375–2389. Published online 2021 Feb 8. doi: 10.1093/nar/gkab061
PMCID:
PMC7913770
AbstractArticlePDF–4.0M
14.
The Functions and Mechanisms of Action of Insulators in the Genomes of Higher Eukaryotes
L. S. Melnikova, P. G. Georgiev, A. K. Golovnin
Acta Naturae. 2020 Oct-Dec; 12(4): 15–33. doi: 10.32607/actanaturae.11144
PMCID:
PMC7800606
AbstractArticlePDF–5.8M
15.
Innovation of heterochromatin functions drives rapid evolution of essential ZAD-ZNF genes in Drosophila
Bhavatharini Kasinathan, Serafin U Colmenares, III, Hannah McConnell, Janet M Young, Gary H Karpen, Harmit S Malik
eLife. 2020; 9: e63368. Published online 2020 Nov 10. doi: 10.7554/eLife.63368
PMCID:
PMC7655104
AbstractArticlePDF–1.7M
16.
Insights into HP1a-Chromatin Interactions
Silvia Meyer-Nava, Victor E. Nieto-Caballero, Mario Zurita, Viviana Valadez-Graham
Cells. 2020 Aug; 9(8): 1866. Published online 2020 Aug 9. doi: 10.3390/cells9081866
PMCID:
PMC7465937
AbstractArticlePDF–2.2M
17.
The insulator functions of the Drosophila polydactyl C2H2 zinc finger protein CTCF: Necessity versus sufficiency
Olga Kyrchanova, Oksana Maksimenko, Airat Ibragimov, Vladimir Sokolov, Nikolay Postika, Maria Lukyanova, Paul Schedl, Pavel Georgiev
Sci Adv. 2020 Mar; 6(13): eaaz3152. Published online 2020 Mar 25. doi: 10.1126/sciadv.aaz3152
PMCID:
PMC7096168
AbstractArticlePDF–4.2M
18.
In situ dissection of domain boundaries affect genome topology and gene transcription in Drosophila
Rodrigo G. Arzate-Mejía, Angel Josué Cerecedo-Castillo, Georgina Guerrero, Mayra Furlan-Magaril, Félix Recillas-Targa
Nat Commun. 2020; 11: 894. Published online 2020 Feb 14. doi: 10.1038/s41467-020-14651-z
PMCID:
PMC7021724
AbstractArticlePDF–3.6M
19.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
20.
Distinct Elements Confer the Blocking and Bypass Functions of the Bithorax Fab-8 Boundary
Olga Kyrchanova, Daniel Wolle, Marat Sabirov, Amina Kurbidaeva, Tsutomu Aoki, Oksana Maksimenko, Maria Kyrchanova, Pavel Georgiev, Paul Schedl
Genetics. 2019 Nov; 213(3): 865–876. Published online 2019 Sep 24. doi: 10.1534/genetics.119.302694
PMCID:
PMC6827379
AbstractArticlePDF–2.2M

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