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Items: 1 to 20 of 39

1.
Single-cell transcriptomics illuminates regulatory steps driving anterior-posterior patterning of Drosophila embryonic mesoderm
Jingjing Sun, Chen Zhang, Fan Gao, Angelike Stathopoulos
Cell Rep. Author manuscript; available in PMC 2023 Dec 8.
Published in final edited form as: Cell Rep. 2023 Oct 31; 42(10): 113289. Published online 2023 Oct 19. doi: 10.1016/j.celrep.2023.113289
PMCID:
PMC10704487
AbstractArticlePDF–2.8M
2.
Membrane-Actin Interactions in Morphogenesis:Lessons Learned from Drosophila Cellularization
Anna Marie Sokac, Natalie Biel, Stefano De Renzis
Semin Cell Dev Biol. Author manuscript; available in PMC 2024 Jan 15.
Published in final edited form as: Semin Cell Dev Biol. 2023 Jan 15; 133: 107–122. Published online 2022 Apr 5. doi: 10.1016/j.semcdb.2022.03.028
PMCID:
PMC9532467
AbstractArticlePDF–1.2M
3.
Capicua is a fast-acting transcriptional brake
Aleena L. Patel, Lili Zhang, Shannon E. Keenan, Christine A. Rushlow, Cécile Fradin, Stanislav Y. Shvartsman
Curr Biol. Author manuscript; available in PMC 2022 Aug 23.
Published in final edited form as: Curr Biol. 2021 Aug 23; 31(16): 3639–3647.e5. Published online 2021 Jun 23. doi: 10.1016/j.cub.2021.05.061
Correction in:
Curr Biol. 2021 Aug 23; 31(16): 3703.
PMCID:
PMC8612007
AbstractArticlePDF–1.5M
4.
A synthetic gene drive system for local, reversible modification and suppression of insect populations
Omar Akbari, Kelly D. Matzen, John M. Marshall, Haixia Huang, Catherine M. Ward, Bruce A. Hay
Curr Biol. Author manuscript; available in PMC 2021 Sep 23.
Published in final edited form as: Curr Biol. 2013 Apr 22; 23(8): 671–677. Published online 2013 Mar 28. doi: 10.1016/j.cub.2013.02.059
PMCID:
PMC8459379
AbstractArticlePDF–1.4M
5.
Engineered reproductively isolated species drive reversible population replacement
Anna Buchman, Isaiah Shriner, Ting Yang, Junru Liu, Igor Antoshechkin, John M. Marshall, Michael W. Perry, Omar S. Akbari
Nat Commun. 2021; 12: 3281. Published online 2021 Jun 2. doi: 10.1038/s41467-021-23531-z
PMCID:
PMC8173020
AbstractArticlePDF–4.5M
6.
The nuclear to cytoplasmic ratio directly regulates zygotic transcription in Drosophila through multiple modalities
Sahla Syed, Henry Wilky, João Raimundo, Bomyi Lim, Amanda A. Amodeo
Proc Natl Acad Sci U S A. 2021 Apr 6; 118(14): e2010210118. Published online 2021 Mar 31. doi: 10.1073/pnas.2010210118
PMCID:
PMC8040668
AbstractArticlePDF–3.5M
7.
Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning
Elizabeth Ing-Simmons, Roshan Vaid, Xin Yang Bing, Michael Levine, Mattias Mannervik, Juan M. Vaquerizas
Nat Genet. 2021; 53(4): 487–499. Published online 2021 Apr 1. doi: 10.1038/s41588-021-00799-x
PMCID:
PMC8035076
AbstractArticlePDF–12M
8.
Identification and characterization of four Drosophila suzukii cellularization genes and their promoters
Ying Yan, Syeda A. Jaffri, Jonas Schwirz, Carl Stein, Marc F. Schetelig
BMC Genet. 2020; 21(Suppl 2): 146. Published online 2020 Dec 18. doi: 10.1186/s12863-020-00939-y
PMCID:
PMC7747377
AbstractArticlePDF–1.0M
9.
Cross-linker–mediated regulation of actin network organization controls tissue morphogenesis
Daniel Krueger, Theresa Quinkler, Simon Arnold Mortensen, Carsten Sachse, Stefano De Renzis
J Cell Biol. 2019 Aug 5; 218(8): 2743–2761. Published online 2019 Jun 28. doi: 10.1083/jcb.201811127
PMCID:
PMC6683744
AbstractArticlePDF–4.9M
10.
Continued activity of the pioneer factor Zelda is required to drive zygotic genome activation
Stephen L. McDaniel, Tyler J. Gibson, Katharine N. Schulz, Meilin Fernandez Garcia, Markus Nevil, Siddhant U. Jain, Peter W. Lewis, Kenneth S. Zaret, Melissa M. Harrison
Mol Cell. Author manuscript; available in PMC 2020 Apr 4.
Published in final edited form as: Mol Cell. 2019 Apr 4; 74(1): 185–195.e4. Published online 2019 Feb 20. doi: 10.1016/j.molcel.2019.01.014
PMCID:
PMC6544384
AbstractArticlePDF–914K
11.
Downregulation of basal myosin‐II is required for cell shape changes and tissue invagination
Daniel Krueger, Pietro Tardivo, Congtin Nguyen, Stefano De Renzis
EMBO J. 2018 Dec 3; 37(23): e100170. Published online 2018 Nov 15. doi: 10.15252/embj.2018100170
PMCID:
PMC6276876
AbstractArticlePDF–4.6M
12.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
13.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
14.
A new mode of DNA binding distinguishes Capicua from other HMG-box factors and explains its mutation patterns in cancer
Marta Forés, Lucía Simón-Carrasco, Leiore Ajuria, Núria Samper, Sergio González-Crespo, Matthias Drosten, Mariano Barbacid, Gerardo Jiménez
PLoS Genet. 2017 Mar; 13(3): e1006622. Published online 2017 Mar 9. doi: 10.1371/journal.pgen.1006622
PMCID:
PMC5344332
AbstractArticlePDF–3.0M
15.
Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster
Peter A. Combs, Michael B. Eisen
Version 1. F1000Res. 2017; 6: 41. Published online 2017 Jan 12. doi: 10.12688/f1000research.9720.1
PMCID:
PMC5325077
AbstractArticlePDF–10M
16.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
17.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
18.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
19.
P-TEFb, the Super Elongation Complex and Mediator Regulate a Subset of Non-paused Genes during Early Drosophila Embryo Development
Olle Dahlberg, Olga Shilkova, Min Tang, Per-Henrik Holmqvist, Mattias Mannervik
PLoS Genet. 2015 Feb; 11(2): e1004971. Published online 2015 Feb 13. doi: 10.1371/journal.pgen.1004971
Correction in:
PLoS Genet. 2015 Jun; 11(6): e1005319.
PMCID:
PMC4334199
AbstractArticlePDF–1.4M
20.
Coordinating the cytoskeleton and endocytosis for regulated plasma membrane growth in the early Drosophila embryo
Donghoon M Lee, Tony JC Harris
Bioarchitecture. 2014 Mar-Apr; 4(2): 68–74. Published online 2014 Apr 23. doi: 10.4161/bioa.28949
PMCID:
PMC4199814
AbstractArticlePDF–1.4M

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