PMC Links for GEO Profiles (Select 50507585) - PMC

Select item 107434131.

Sialyltransferase Mutations Alter the Expression of Calcium-Binding Interneurons in Mice Neocortex, Hippocampus and Striatum

Senka Blažetić, Vinko Krajina, Irena Labak, Barbara Viljetić, Valentina Pavić, Vedrana Ivić, Marta Balog, Ronald L. Schnaar, Marija Heffer

Int J Mol Sci. 2023 Dec; 24(24): 17218. Published online 2023 Dec 7. doi: 10.3390/ijms242417218

PMCID:: PMC10743413

Abstract Article PDF–6.5M

Select item 91305252.

Human brain sialoglycan ligand for CD33, a microglial inhibitory Siglec implicated in Alzheimer’s disease

Anabel Gonzalez-Gil, Ryan N. Porell, Steve M. Fernandes, Eila Maenpaa, T. August Li, Tong Li, Philip C. Wong, Kazuhiro Aoki, Michael Tiemeyer, Zaikuan J. Yu, Benjamin C. Orsburn, Namandjé N. Bumpus, Russell T. Matthews, Ronald L. Schnaar

J Biol Chem. 2022 Jun; 298(6): 101960. Published online 2022 Apr 20. doi: 10.1016/j.jbc.2022.101960

PMCID:: PMC9130525

Abstract Article PDF–2.0M

Select item 70734603.

GT1b functions as a novel endogenous agonist of toll‐like receptor 2 inducing neuropathic pain

Hyoungsub Lim, Jaesung Lee, Byunghyun You, Jae Hoon Oh, Hyuck Jun Mok, Yoo Sung Kim, Bo‐Eun Yoon, Byung Gon Kim, Seung Keun Back, Jong‐Sang Park, Kwang Pyo Kim, Ronald L Schnaar, Sung Joong Lee

EMBO J. 2020 Mar 16; 39(6): e102214. Published online 2020 Feb 6. doi: 10.15252/embj.2019102214

PMCID:: PMC7073460

Abstract Article PDF–2.4M

Select item 52245934.

Mice lacking sialyltransferase ST3Gal-II develop late-onset obesity and insulin resistance

Pablo HH Lopez, Susan Aja, Kazuhiro Aoki, Marcus M Seldin, Xia Lei, Gabriele V Ronnett, G William Wong, Ronald L Schnaar

Glycobiology. 2017 Jan; 27(2): 129–139. Published online 2017 Jan 5. doi: 10.1093/glycob/cww098

PMCID:: PMC5224593

Abstract Article PDF–667K

Select item 44788075.

Sialylation regulates brain structure and function

Seung-Wan Yoo, Mary G. Motari, Keiichiro Susuki, Jillian Prendergast, Andrea Mountney, Andres Hurtado, Ronald L. Schnaar

FASEB J. 2015 Jul; 29(7): 3040–3053. Published online 2015 Apr 6. doi: 10.1096/fj.15-270983

PMCID:: PMC4478807

Abstract Article

Select item 36059716.

A phenotype survey of 36 mutant mouse strains with gene-targeted defects in glycosyltransferases or glycan-binding proteins

Sally L Orr, Dzung Le, Jeffrey M Long, Peter Sobieszczuk, Bo Ma, Hua Tian, Xiaoqun Fang, James C Paulson, Jamey D Marth, Nissi Varki

Glycobiology. 2013 Mar; 23(3): 363–380. Published online 2012 Oct 31. doi: 10.1093/glycob/cws150

PMCID:: PMC3605971

Abstract Article PDF–532K

Select item 34253277.

Biosynthesis of the major brain gangliosides GD1a and GT1b

Elizabeth R Sturgill, Kazuhiro Aoki, Pablo HH Lopez, Daniel Colacurcio, Katarina Vajn, Ileana Lorenzini, Senka Majić, Won Ho Yang, Marija Heffer, Michael Tiemeyer, Jamey D Marth, Ronald L Schnaar

Glycobiology. 2012 Oct; 22(10): 1289–1301. Published online 2012 Jun 26. doi: 10.1093/glycob/cws103

PMCID:: PMC3425327

Abstract Article PDF–604K

Select item 33136948.

Adult onset cardiac dilatation in a transgenic mouse line with Galβ1,3GalNAc α2,3-sialyltransferase II (ST3Gal-II) transgenes: a new model for dilated cardiomyopathy

Osamu SUZUKI, Takao KANAI, Toshio NISHIKAWA, Yoshie YAMAMOTO, Akira NOGUCHI, Kazuhiro TAKIMOTO, Minako KOURA, Yoko NOGUCHI, Kozue UCHIO-YAMADA, Shuichi TSUJI, Junichiro MATSUDA

Proc Jpn Acad Ser B Phys Biol Sci. 2011 Oct 11; 87(8): 550–562. doi: 10.2183/pjab.87.550

PMCID:: PMC3313694

Abstract Article PDF–856K

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 304923510.

Characterization of Expression of Glycan Ligands for Siglec-F in Normal Mouse Lungs

Jin P. Guo, Mary E. Brummet, Allen C. Myers, Ho Jeong Na, Elizabeth Rowland, Ronald L. Schnaar, Tao Zheng, Zhou Zhu, Bruce S. Bochner

Am J Respir Cell Mol Biol. 2011 Feb; 44(2): 238–243. Published online 2010 Apr 15. doi: 10.1165/rcmb.2010-0007OC

PMCID:: PMC3049235

Abstract Article PDF–741K

Select item 302253411.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 255627012.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 31111913.

Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method

Yulan Piao, Naomi T. Ko, Meng K. Lim, Minoru S.H. Ko

Genome Res. 2001 Sep; 11(9): 1553–1558. doi: 10.1101/gr.185501

PMCID:: PMC311119

Abstract Article PDF–743K

Select item 31099214.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 30876316.

GenePaint.org: an atlas of gene expression patterns in the mouse embryo

Axel Visel, Christina Thaller, Gregor Eichele

Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029

PMCID:: PMC308763

Abstract Article PDF–253K

Select item 28355417.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

Select item 13924118.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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