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Items: 1 to 20 of 154

1.
Hypomorphic mutation in the large subunit of replication protein A affects mutagenesis by human APOBEC cytidine deaminases in yeast
Matthew S Dennen, Zachary W Kockler, Steven A Roberts, Adam B Burkholder, Leszek J Klimczak, Dmitry A Gordenin
G3 (Bethesda) 2024 Oct; 14(10): jkae196. Published online 2024 Aug 16. doi: 10.1093/g3journal/jkae196
PMCID:
PMC11457066
AbstractArticlePDF–1.3M
2.
A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex
Marisa Bedir, Emily Outwin, Rita Colnaghi, Lydia Bassett, Iga Abramowicz, Mark O’Driscoll
EMBO Rep. 2024 Aug; 25(8): 3432–3455. Published online 2024 Jun 28. doi: 10.1038/s44319-024-00184-9
PMCID:
PMC11315929
AbstractArticlePDF–3.4M
3.
New insights into ATR inhibition in muscle invasive bladder cancer: The role of apolipoprotein B mRNA editing catalytic subunit 3B
HYUNHO KIM, UIJU CHO, SOOK HEE HONG, HYUNG SOON PARK, IN-HO KIM, HO JUNG AN, BYOUNG YONG SHIM, JIN HYOUNG KANG
Oncol Res. 2024; 32(6): 1021–1030. Published online 2024 May 23. doi: 10.32604/or.2024.048919
PMCID:
PMC11136685
AbstractArticlePDF–38M
4.
Distinguishing preferences of human APOBEC3A and APOBEC3B for cytosines in hairpin loops, and reflection of these preferences in APOBEC-signature cancer genome mutations
Yasha Butt, Ramin Sakhtemani, Rukshana Mohamad-Ramshan, Michael S. Lawrence, Ashok S. Bhagwat
Nat Commun. 2024; 15: 2369. Published online 2024 Mar 18. doi: 10.1038/s41467-024-46231-w
PMCID:
PMC10948833
AbstractArticlePDF–3.7M
5.
The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance
Deborah R. Caswell, Philippe Gui, Manasi K. Mayekar, Emily K. Law, Oriol Pich, Chris Bailey, Jesse Boumelha, D. Lucas Kerr, Collin M. Blakely, Tadashi Manabe, Carlos Martinez-Ruiz, Bjorn Bakker, Juan De Dios Palomino Villcas, Natalie I. Vokes, Michelle Dietzen, Mihaela Angelova, Beatrice Gini, Whitney Tamaki, Paul Allegakoen, Wei Wu, Timothy J. Humpton, William Hill, Mona Tomaschko, Wei-Ting Lu, Franziska Haderk, Maise Al Bakir, Ai Nagano, Francisco Gimeno-Valiente, Sophie de Carné Trécesson, Roberto Vendramin, Vittorio Barbè, Miriam Mugabo, Clare E. Weeden, Andrew Rowan, Caroline E. McCoach, Bruna Almeida, Mary Green, Carlos Gomez, Shigeki Nanjo, Dora Barbosa, Chris Moore, Joanna Przewrocka, James R. M. Black, Eva Grönroos, Alejandro Suarez-Bonnet, Simon L. Priestnall, Caroline Zverev, Scott Lighterness, James Cormack, Victor Olivas, Lauren Cech, Trisha Andrews, Brandon Rule, Yuwei Jiao, Xinzhu Zhang, Paul Ashford, Cameron Durfee, Subramanian Venkatesan, Nuri Alpay Temiz, Lisa Tan, Lindsay K. Larson, Prokopios P. Argyris, William L. Brown, Elizabeth A. Yu, Julia K. Rotow, Udayan Guha, Nitin Roper, Johnny Yu, Rachel I. Vogel, Nicholas J. Thomas, Antonio Marra, Pier Selenica, Helena Yu, Samuel F. Bakhoum, Su Kit Chew, Jorge S. Reis-Filho, Mariam Jamal-Hanjani, Karen H. Vousden, Nicholas McGranahan, Eliezer M. Van Allen, Nnennaya Kanu, Reuben S. Harris, Julian Downward, Trever G. Bivona, Charles Swanton
Nat Genet. 2024; 56(1): 60–73. Published online 2023 Dec 4. doi: 10.1038/s41588-023-01592-8
PMCID:
PMC10786726
AbstractArticlePDF–13M
6.
Regulatory variants of APOBEC3 genes potentially associate with COVID-19 severity in populations with African ancestry
Ke Zhang, Fang Chen, Hu-Yan Shen, Ping-Ping Zhang, Han Gao, Hong Peng, Yu-Si Luo, Zhong-Shan Cheng
Sci Rep. 2023; 13: 22435. Published online 2023 Dec 17. doi: 10.1038/s41598-023-49791-x
PMCID:
PMC10725877
AbstractArticlePDF–4.6M
7.
Mutational impact of APOBEC3A and APOBEC3B in a human cell line and comparisons to breast cancer
Michael A. Carpenter, Nuri A. Temiz, Mahmoud A. Ibrahim, Matthew C. Jarvis, Margaret R. Brown, Prokopios P. Argyris, William L. Brown, Gabriel J. Starrett, Douglas Yee, Reuben S. Harris
PLoS Genet. 2023 Nov; 19(11): e1011043. Published online 2023 Nov 30. doi: 10.1371/journal.pgen.1011043
PMCID:
PMC10715669
AbstractArticlePDF–2.9M
8.
Human APOBEC3B promotes tumor development in vivo including signature mutations and metastases
Cameron Durfee, Nuri Alpay Temiz, Rena Levin-Klein, Prokopios P. Argyris, Lene Alsøe, Sergio Carracedo, Alicia Alonso de la Vega, Joshua Proehl, Anna M. Holzhauer, Zachary J. Seeman, Xingyu Liu, Yu-Hsiu T. Lin, Rachel I. Vogel, Rocio Sotillo, Hilde Nilsen, Reuben S. Harris
Cell Rep Med. 2023 Oct 17; 4(10): 101211. Published online 2023 Oct 4. doi: 10.1016/j.xcrm.2023.101211
PMCID:
PMC10591044
AbstractArticlePDF–8.8M
9.
APOBEC3B regulates R-loops and promotes transcription-associated mutagenesis in cancer
Jennifer L. McCann, Agnese Cristini, Emily K. Law, Seo Yun Lee, Michael Tellier, Michael A. Carpenter, Chiara Beghè, Jae Jin Kim, Anthony Sanchez, Matthew C. Jarvis, Bojana Stefanovska, Nuri A. Temiz, Erik N. Bergstrom, Daniel J. Salamango, Margaret R. Brown, Shona Murphy, Ludmil B. Alexandrov, Kyle M. Miller, Natalia Gromak, Reuben S. Harris
Nat Genet. 2023; 55(10): 1721–1734. Published online 2023 Sep 21. doi: 10.1038/s41588-023-01504-w
PMCID:
PMC10562255
AbstractArticlePDF–14M
10.
Human cytomegalovirus mediates APOBEC3B relocalization early during infection through a ribonucleotide reductase-independent mechanism
Elisa Fanunza, Adam Z. Cheng, Ashley A. Auerbach, Bojana Stefanovska, Sofia N. Moraes, James R. Lokensgard, Matteo Biolatti, Valentina Dell'Oste, Craig J. Bierle, Wade A. Bresnahan, Reuben S. Harris
J Virol. 2023 Aug; 97(8): e00781-23. Published online 2023 Aug 11. doi: 10.1128/jvi.00781-23
PMCID:
PMC10506462
AbstractArticlePDF–5.4M
11.
The APOBEC3B c.783delG Truncating Mutation Is Not Associated with an Increased Risk of Breast Cancer in the Polish Population
Katarzyna Gliniewicz, Wojciech Kluźniak, Dominika Wokołorczyk, Tomasz Huzarski, Klaudia Stempa, Helena Rudnicka, Anna Jakubowska, Marek Szwiec, Joanna Jarkiewicz-Tretyn, Mariusz Naczk, Tomasz Kluz, Tadeusz Dębniak, Jacek Gronwald, Jan Lubiński, Steven A. Narod, Mohammad R. Akbari, Cezary Cybulski
Genes (Basel) 2023 Jul; 14(7): 1329. Published online 2023 Jun 24. doi: 10.3390/genes14071329
PMCID:
PMC10379723
AbstractArticlePDF–288K
12.
APOBEC3B coordinates R-loop to promote replication stress and sensitize cancer cells to ATR/Chk1 inhibitors
Chunyan Zong, Zhe Zhang, Li Gao, Jie He, Yiran Wang, Qian Li, Xiaoting Liu, Jie Yang, Di Chen, Rui Huang, Guopei Zheng, Xiaoliang Jin, Wu Wei, Renbing Jia, Jianfeng Shen
Cell Death Dis. 2023 Jun; 14(6): 348. Published online 2023 Jun 3. doi: 10.1038/s41419-023-05867-0
PMCID:
PMC10239489
AbstractArticlePDF–4.9M
13.
TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing
Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan
Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233
PMCID:
PMC10237422
AbstractArticlePDF–23M
14.
APOBEC3B stratifies ovarian clear cell carcinoma with distinct immunophenotype and prognosis
Xiaoran Long, Huaiwu Lu, Mei-Chun Cai, Jingyu Zang, Zhuqing Zhang, Jie Wu, Xiaoshi Liu, Lin Cheng, Jiejun Cheng, Lydia W. T. Cheung, Zhen Shen, Ying Zhou, Wen Di, Guanglei Zhuang, Xia Yin
Br J Cancer. 2023 Jun 15; 128(11): 2054–2062. Published online 2023 Mar 30. doi: 10.1038/s41416-023-02239-5
PMCID:
PMC10206171
AbstractArticlePDF–2.5M
15.
Aberrant APOBEC3B Expression in Breast Cancer Is Linked to Proliferation and Cell Cycle Phase
Pieter A. Roelofs, Mieke A. M. Timmermans, Bojana Stefanovska, Myrthe A. den Boestert, Amber W. M. van den Borne, Hayri E. Balcioglu, Anita M. Trapman, Reuben S. Harris, John W. M. Martens, Paul N. Span
Cells. 2023 Apr; 12(8): 1185. Published online 2023 Apr 18. doi: 10.3390/cells12081185
PMCID:
PMC10136826
AbstractArticlePDF–18M
16.
APOBEC mutagenesis and selection for NFE2L2 contribute to the origin of lung squamous-cell carcinoma
Vincent L. Cannataro, Shalley Kudalkar, Krishna Dasari, Stephen G. Gaffney, Heather M. Lazowski, Laura K. Jackson, Isil Yildiz, Rahul K. Das, Bonnie E. Gould Rothberg, Karen S. Anderson, Jeffrey P. Townsend
Lung Cancer. Author manuscript; available in PMC 2023 Apr 25.
Published in final edited form as: Lung Cancer. 2022 Sep; 171: 34–41. Published online 2022 Jul 9. doi: 10.1016/j.lungcan.2022.07.004
PMCID:
PMC10126952
AbstractArticlePDF–860K
17.
Primary mucosal melanomas of the head and neck are characterised by overexpression of the DNA mutating enzyme APOBEC3B
Prokopios P Argyris, Jordan Naumann, Matthew C Jarvis, Peter E Wilkinson, Dan P Ho, Mohammed N Islam, Indraneel Bhattacharyya, Rajaram Gopalakrishnan, Faqian Li, Ioannis G Koutlas, Alessio Giubellino, Reuben S Harris
Histopathology. 2023 Mar; 82(4): 608–621. Published online 2022 Dec 5. doi: 10.1111/his.14843
PMCID:
PMC10107945
AbstractArticlePDF–1.9M
18.
APOBEC3A/B deletion polymorphism and endometrial cancer risk
Nigar Sofiyeva, Camilla Krakstad, Mari K. Halle, Tracy A. O'Mara, Pål Romundstad, Kristian Hveem, Lars Vatten, Per E. Lønning, Liv B. Gansmo, Stian Knappskog
Cancer Med. 2023 Mar; 12(6): 6659–6667. Published online 2022 Nov 16. doi: 10.1002/cam4.5448
PMCID:
PMC10067079
AbstractArticlePDF–646K
19.
Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma
Yu-Fei Cao, Lei Xie, Bei-Bei Tong, Man-Yu Chu, Wen-Qi Shi, Xiang Li, Jian-Zhong He, Shao-Hong Wang, Zhi-Yong Wu, Dan-Xia Deng, Ya-Qi Zheng, Zhi-Mao Li, Xiu-E Xu, Lian-Di Liao, Yin-Wei Cheng, Li-Yan Li, Li-Yan Xu, En-Min Li
Cell Death Differ. 2023 Feb; 30(2): 527–543. Published online 2022 Dec 16. doi: 10.1038/s41418-022-01104-x
PMCID:
PMC9950447
AbstractArticlePDF–8.4M
20.
APOBEC3B drives PKR-mediated translation shutdown and protects stress granules in response to viral infection
Lavanya Manjunath, Sunwoo Oh, Pedro Ortega, Alexis Bouin, Elodie Bournique, Ambrocio Sanchez, Pia Møller Martensen, Ashley A. Auerbach, Jordan T. Becker, Marcus Seldin, Reuben S. Harris, Bert L. Semler, Rémi Buisson
Nat Commun. 2023; 14: 820. Published online 2023 Feb 14. doi: 10.1038/s41467-023-36445-9
PMCID:
PMC9925369
AbstractArticlePDF–4.6M

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