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Items: 1 to 20 of 25

1.
Large analysis of genetic manipulations reveals an inverse correlation between initial alcohol resistance and rapid tolerance phenotypes
Maggie M. Chvilicek, Alexandra Seguin, Daniel R. Lathen, Iris Titos, Pearl N. Cummins‐Beebee, Miguel A. Pabon, Maša Miščević, Emily Nickel, Collin B. Merrill, Aylin R. Rodan, Adrian Rothenfluh
Genes Brain Behav. 2024 Feb; 23(1): e12884. Published online 2024 Jan 30. doi: 10.1111/gbb.12884
PMCID:
PMC10825885
AbstractArticlePDF–1.7M
2.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
3.
JmjC domain proteins modulate circadian behaviors and sleep in Drosophila
Nevine A. Shalaby, Jorge H. Pinzon, Anjana S. Narayanan, Eugene Jennifer Jin, Morgan P. Ritz, Rachel J. Dove, Heike Wolfenberg, Aylin R. Rodan, Michael Buszczak, Adrian Rothenfluh
Sci Rep. 2018; 8: 815. Published online 2018 Jan 16. doi: 10.1038/s41598-017-18989-1
PMCID:
PMC5770425
AbstractArticlePDF–4.2M
4.
Alcohol-Induced Behaviors Require a Subset of Drosophila JmjC-Domain Histone Demethylases in the Nervous System
Jorge H. Pinzón, Addison R. Reed, Nevine A. Shalaby, Michael Buszczak, Aylin R. Rodan, Adrian Rothenfluh
Alcohol Clin Exp Res. Author manuscript; available in PMC 2018 Dec 1.
Published in final edited form as: Alcohol Clin Exp Res. 2017 Dec; 41(12): 2015–2024. Published online 2017 Oct 30. doi: 10.1111/acer.13508
PMCID:
PMC5711590
AbstractArticlePDF–1.5M
5.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
6.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
7.
Systematic discovery of genetic modulation by Jumonji histone demethylases in Drosophila
Nevine A. Shalaby, Raheel Sayed, Qiao Zhang, Shane Scoggin, Susan Eliazer, Adrian Rothenfluh, Michael Buszczak
Sci Rep. 2017; 7: 5240. Published online 2017 Jul 12. doi: 10.1038/s41598-017-05004-w
PMCID:
PMC5507883
AbstractArticlePDF–3.3M
8.
Histone lysine demethylases in Drosophila melanogaster
Andreana Holowatyj, Zeng-Quan Yang, Lori A Pile
Fly (Austin) 2015 Jan-Mar; 9(1): 36–44. Published online 2015 Jul 24. doi: 10.1080/19336934.2015.1074787
PMCID:
PMC4594552
AbstractArticlePDF–326K
9.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
10.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
11.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
12.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
13.
Genetic circuitry of Survival motor neuron, the gene underlying spinal muscular atrophy
Anindya Sen, Douglas N. Dimlich, K. G. Guruharsha, Mark W. Kankel, Kazuya Hori, Takakazu Yokokura, Sophie Brachat, Delwood Richardson, Joseph Loureiro, Rajeev Sivasankaran, Daniel Curtis, Lance S. Davidow, Lee L. Rubin, Anne C. Hart, David Van Vactor, Spyros Artavanis-Tsakonas
Proc Natl Acad Sci U S A. 2013 Jun 25; 110(26): E2371–E2380. Published online 2013 Jun 11. doi: 10.1073/pnas.1301738110
PMCID:
PMC3696827
AbstractArticlePDF–3.9M
14.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
15.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
16.
A Protein Complex Network of Drosophila melanogaster
K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas
Cell. Author manuscript; available in PMC 2012 Oct 28.
Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047
PMCID:
PMC3319048
AbstractArticlePDF–3.2M
17.
Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq
Qiang Gan, Iouri Chepelev, Gang Wei, Lama Tarayrah, Kairong Cui, Keji Zhao, Xin Chen
Cell Res. Author manuscript; available in PMC 2011 Jan 1.
Published in final edited form as: Cell Res. 2010 Jul; 20(7): 763–783. Published online 2010 May 4. doi: 10.1038/cr.2010.64
PMCID:
PMC2919574
AbstractArticlePDF–3.1M
18.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
19.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M
20.
Two Gr genes underlie sugar reception in Drosophila
Anupama Dahanukar, Ya-Ting Lei, Jae Young Kwon, John R. Carlson
Neuron. Author manuscript; available in PMC 2008 Nov 8.
Published in final edited form as: Neuron. 2007 Nov 8; 56(3): 503–516. doi: 10.1016/j.neuron.2007.10.024
PMCID:
PMC2096712
AbstractArticlePDF–2.6M

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