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Select item 97291171.

Enhancer–promoter interactions and transcription are largely maintained upon acute loss of CTCF, cohesin, WAPL or YY1

Tsung-Han S. Hsieh, Claudia Cattoglio, Elena Slobodyanyuk, Anders S. Hansen, Xavier Darzacq, Robert Tjian

Nat Genet. 2022; 54(12): 1919–1932. Published online 2022 Dec 5. doi: 10.1038/s41588-022-01223-8

PMCID:: PMC9729117

Abstract Article PDF–24M

Select item 97108792.

Decreasing Wapl dosage partially corrects embryonic growth and brain transcriptome phenotypes in Nipbl^+/− embryos

Connor M. Kean, Christopher J. Tracy, Apratim Mitra, Beenish Rahat, Matthew T. Van Winkle, Claudia M. Gebert, Jacob A. Noeker, Anne L. Calof, Arthur D. Lander, Judith A. Kassis, Karl Pfeifer

Sci Adv. 2022 Nov; 8(48): eadd4136. Published online 2022 Nov 30. doi: 10.1126/sciadv.add4136

PMCID:: PMC9710879

Abstract Article PDF–1.5M

Select item 83132393.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 81705084.

Topoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity

Andres Canela, Yaakov Maman, Shar-yin N. Huang, Gordana Wutz, Wen Tang, Guido Zagnoli-Vieira, Elsa Callen, Nancy Wong, Amanda Day, Jan-Michael Peters, Keith W. Caldecott, Yves Pommier, André Nussenzweig

Mol Cell. Author manuscript; available in PMC 2021 Jun 2.

Published in final edited form as: Mol Cell. 2019 Jul 25; 75(2): 252–266.e8. Published online 2019 Jun 12. doi: 10.1016/j.molcel.2019.04.030

PMCID:: PMC8170508

Abstract Article PDF–2.4M

Select item 79387705.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 76103526.

WAPL maintains a cohesin loading cycle to preserve cell-type specific distal gene regulation

Ning Qing Liu, Michela Maresca, Teun van den Brand, Luca Braccioli, Marijne M.G.A. Schijns, Hans Teunissen, Benoit G. Bruneau, Elphège P. Nora, Elzo de Wit

Nat Genet. Author manuscript; available in PMC 2021 Jun 14.

Published in final edited form as: Nat Genet. 2021 Jan 1; 53(1): 100–109. Published online 2020 Dec 14. doi: 10.1038/s41588-020-00744-4

PMCID:: PMC7610352

Abstract Article PDF–5.6M

Select item 71471107.

Wapl releases Scc1-cohesin and regulates chromosome structure and segregation in mouse oocytes

Mariana C.C. Silva, Sean Powell, Sabrina Ladstätter, Johanna Gassler, Roman Stocsits, Antonio Tedeschi, Jan-Michael Peters, Kikuë Tachibana

J Cell Biol. 2020 Apr 6; 219(4): e201906100. Published online 2020 Mar 17. doi: 10.1083/jcb.201906100

PMCID:: PMC7147110

Abstract Article PDF–4.6M

Select item 71169008.

Wapl repression by Pax5 promotes V gene recombination by Igh loop extrusion

Louisa Hill, Anja Ebert, Markus Jaritz, Gordana Wutz, Kota Nagasaka, Hiromi Tagoh, Daniela Kostanova-Poliakova, Karina Schindler, Qiong Sun, Peter Bönelt, Maria Fischer, Jan-Michael Peters, Meinrad Busslinger

Nature. Author manuscript; available in PMC 2021 Mar 14.

Published in final edited form as: Nature. 2020 Aug 1; 584(7819): 142–147. Published online 2020 Jul 1. doi: 10.1038/s41586-020-2454-y

PMCID:: PMC7116900

Abstract Article PDF–6.9M

Select item 60806959.

Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl

Georg A. Busslinger, Roman R. Stocsits, Petra van der Lelij, Elin Axelsson, Antonio Tedeschi, Niels Galjart, Jan-Michael Peters

Nature. Author manuscript; available in PMC 2018 Aug 7.

Published in final edited form as: Nature. 2017 Apr 27; 544(7651): 503–507. Published online 2017 Apr 19. doi: 10.1038/nature22063

PMCID:: PMC6080695

Abstract Article PDF–5.6M

Select item 608069210.

Wapl is an essential regulator of chromatin structure and chromosome segregation

Antonio Tedeschi, Gordana Wutz, Sébastien Huet, Markus Jaritz, Annelie Wuensche, Erika Schirghuber, Iain Finley Davidson, Wen Tang, David A. Cisneros, Venugopal Bhaskara, Tomoko Nishiyama, Alipasha Vaziri, Anton Wutz, Jan Ellenberg, Jan-Michael Peters

Nature. Author manuscript; available in PMC 2018 Aug 7.

Published in final edited form as: Nature. 2013 Sep 26; 501(7468): 564–568. Published online 2013 Aug 25. doi: 10.1038/nature12471

PMCID:: PMC6080692

Abstract Article PDF–1.7M

Select item 573085911.

A mechanism of cohesin‐dependent loop extrusion organizes zygotic genome architecture

Johanna Gassler, Hugo B Brandão, Maxim Imakaev, Ilya M Flyamer, Sabrina Ladstätter, Wendy A Bickmore, Jan‐Michael Peters, Leonid A Mirny, Kikuë Tachibana

EMBO J. 2017 Dec 15; 36(24): 3600–3618. Published online 2017 Dec 7. doi: 10.15252/embj.201798083

PMCID:: PMC5730859

Abstract Article PDF–3.3M

Select item 538122612.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 534152013.

The antiobesity factor WDTC1 suppresses adipogenesis via the CRL4^WDTC¹ E3 ligase

Beezly S Groh, Feng Yan, Matthew D Smith, Yanbao Yu, Xian Chen, Yue Xiong

EMBO Rep. 2016 May; 17(5): 638–647. Published online 2016 Apr 9. doi: 10.15252/embr.201540500

PMCID:: PMC5341520

Abstract Article PDF–1.1M

Select item 512377014.

Cohesin removal along the chromosome arms during the first meiotic division depends on a NEK1-PP1γ-WAPL axis in the mouse

Miguel A. Brieño-Enríquez, Stefannie L. Moak, Melissa Toledo, Joshua J. Filter, Stephen Gray, José L. Barbero, Paula E. Cohen, J. Kim Holloway

Cell Rep. Author manuscript; available in PMC 2016 Nov 25.

Published in final edited form as: Cell Rep. 2016 Oct 18; 17(4): 977–986. doi: 10.1016/j.celrep.2016.09.059

PMCID:: PMC5123770

Abstract Article PDF–1.4M

Select item 422640315.

Quantitative analysis of cohesin complex stoichiometry and SMC3 modification-dependent protein interactions

Chen Ding, Yehua Li, Beom-Jun Kim, Anna Malovannaya, Sung Yun Jung, Yi Wang, Jun Qin

J Proteome Res. Author manuscript; available in PMC 2014 Nov 10.

Published in final edited form as: J Proteome Res. 2011 Aug 5; 10(8): 3652–3659. Published online 2011 Jul 8. doi: 10.1021/pr2002758

PMCID:: PMC4226403

Abstract Article PDF–1017K

Select item 382580616.

Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome

Silvia Remeseiro, Ana Cuadrado, Shimako Kawauchi, Anne L. Calof, Arthur D. Lander, Ana Losada

Biochim Biophys Acta. Author manuscript; available in PMC 2014 Dec 1.

Published in final edited form as: Biochim Biophys Acta. 2013 Dec; 1832(12): 10.1016/j.bbadis.2013.07.020. Published online 2013 Aug 3. doi: 10.1016/j.bbadis.2013.07.020

PMCID:: PMC3825806

Abstract Article PDF–912K

Select item 380979417.

Allogeneic T cell responses are regulated by a specific miRNA-mRNA network

Yaping Sun, Isao Tawara, Meng Zhao, Zhaohui S. Qin, Tomomi Toubai, Nathan Mathewson, Hiroya Tamaki, Evelyn Nieves, Arul M. Chinnaiyan, Pavan Reddy

J Clin Invest. 2013 Nov 1; 123(11): 4739–4754. Published online 2013 Oct 15. doi: 10.1172/JCI70013

PMCID:: PMC3809794

Abstract Article PDF–1.5M

Select item 325246518.

Oct4 links multiple epigenetic pathways to the pluripotency network

Junjun Ding, Huilei Xu, Francesco Faiola, Avi Ma'ayan, Jianlong Wang

Cell Res. 2012 Jan; 22(1): 155–167. Published online 2011 Nov 15. doi: 10.1038/cr.2011.179

PMCID:: PMC3252465

Abstract Article PDF–2.7M

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 309339520.

RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity

Anja Nitzsche, Maciej Paszkowski-Rogacz, Filomena Matarese, Eva M. Janssen-Megens, Nina C. Hubner, Herbert Schulz, Ingrid de Vries, Li Ding, Norbert Huebner, Matthias Mann, Hendrik G. Stunnenberg, Frank Buchholz

PLoS One. 2011; 6(5): e19470. Published online 2011 May 12. doi: 10.1371/journal.pone.0019470

PMCID:: PMC3093395

Abstract Article PDF–1.0M

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