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Select item 110719581.

Multifaceted roles of YEATS domain-containing proteins and novel links to neurological diseases

Ranchana Yeewa, Pawita Chaiya, Salinee Jantrapirom, Vorasuk Shotelersuk, Luca Lo Piccolo

Cell Mol Life Sci. 2022 Mar; 79(3): 183. Published online 2022 Mar 12. doi: 10.1007/s00018-022-04218-0

PMCID:: PMC11071958

Abstract Article PDF–3.2M

Select item 110457212.

The H3K79me3 methyl-transferase Grappa is involved in the establishment and thermal plasticity of abdominal pigmentation in Drosophila melanogaster females

Raphaël Narbey, Emmanuèle Mouchel-Vielh, Jean-Michel Gibert

Sci Rep. 2024; 14: 9547. Published online 2024 Apr 25. doi: 10.1038/s41598-024-60184-6

PMCID:: PMC11045721

Abstract Article PDF–4.4M

Select item 108996043.

The emergence of circadian timekeeping in the intestine

Kathyani Parasram, Amy Zuccato, Minjeong Shin, Reegan Willms, Brian DeVeale, Edan Foley, Phillip Karpowicz

Nat Commun. 2024; 15: 1788. Published online 2024 Feb 27. doi: 10.1038/s41467-024-45942-4

PMCID:: PMC10899604

Abstract Article PDF–3.6M

Select item 105044884.

The human leukemic oncogene MLL-AF4 promotes hyperplastic growth of hematopoietic tissues in Drosophila larvae

Julie A. Johannessen, Miriam Formica, Aina Louise C. Haukeland, Nora Rojahn Bråthen, Amani Al Outa, Miriam Aarsund, Marc Therrien, Jorrit M. Enserink, Helene Knævelsrud

iScience. 2023 Oct 20; 26(10): 107726. Published online 2023 Aug 25. doi: 10.1016/j.isci.2023.107726

PMCID:: PMC10504488

Abstract Article PDF–3.9M

Select item 63985015.

SOD1 activity threshold and TOR signalling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a Drosophila model of amyotrophic lateral sclerosis

Kriti Chaplot, Lokesh Pimpale, Balaji Ramalingam, Senthilkumar Deivasigamani, Siddhesh S. Kamat, Girish S. Ratnaparkhi

Dis Model Mech. 2019 Feb 1; 12(2): dmm033803. Published online 2019 Feb 7. doi: 10.1242/dmm.033803

PMCID:: PMC6398501

Abstract Article

Select item 61993446.

Aberrant activation of non-coding RNA targets of transcriptional elongation complexes contributes to TDP-43 toxicity

Chia-Yu Chung, Amit Berson, Jason R. Kennerdell, Ashley Sartoris, Travis Unger, Sílvia Porta, Hyung-Jun Kim, Edwin R. Smith, Ali Shilatifard, Vivianna Van Deerlin, Virginia M.-Y. Lee, Alice Chen-Plotkin, Nancy M. Bonini

Nat Commun. 2018; 9: 4406. Published online 2018 Oct 23. doi: 10.1038/s41467-018-06543-0

Correction in:: Nat Commun. 2019; 10: 555.

PMCID:: PMC6199344

Abstract Article PDF–2.9M

Select item 57078057.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890028.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 47380059.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 469182810.

Suppressor of sable [Su(s)] and Wdr82 down-regulate RNA from heat-shock-inducible repetitive elements by a mechanism that involves transcription termination

Paul Brewer-Jensen, Carrie B. Wilson, John Abernethy, Lonna Mollison, Samantha Card, Lillie L. Searles

RNA. 2016 Jan; 22(1): 139–154. doi: 10.1261/rna.048819.114

PMCID:: PMC4691828

Abstract Article PDF–586K

Select item 456802511.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833012.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832913.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 439155514.

Identification of Genes That Promote or Inhibit Olfactory Memory Formation in Drosophila

Erica Walkinshaw, Yunchao Gai, Caitlin Farkas, Daniel Richter, Eric Nicholas, Krystyna Keleman, Ronald L. Davis

Genetics. 2015 Apr; 199(4): 1173–1182. Published online 2015 Feb 2. doi: 10.1534/genetics.114.173575

PMCID:: PMC4391555

Abstract Article PDF–1.1M

Select item 435288715.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 434413216.

AF9 YEATS Domain Links Histone Acetylation to DOT1L-Mediated H3K79 Methylation

Yuanyuan Li, Hong Wen, Yuanxin Xi, Kaori Tanaka, Haibo Wang, Danni Peng, Yongfeng Ren, Qihuang Jin, Sharon Y.R. Dent, Wei Li, Haitao Li, Xiaobing Shi

Cell. Author manuscript; available in PMC 2015 Feb 27.

Published in final edited form as: Cell. 2014 Oct 23; 159(3): 558–571. doi: 10.1016/j.cell.2014.09.049

PMCID:: PMC4344132

Abstract Article PDF–3.0M

Select item 427565817.

Sex- and Tissue-specific Functions of Drosophila Doublesex Transcription Factor Target Genes

Emily Clough, Erin Jimenez, Yoo-Ah Kim, Cale Whitworth, Megan C. Neville, Leonie Hempel, Hania J. Pavlou, Zhen-Xia Chen, David Sturgill, Ryan Dale, Harold E. Smith, Teresa M. Przytycka, Stephen F. Goodwin, Mark Van Doren, Brian Oliver

Dev Cell. Author manuscript; available in PMC 2015 Dec 22.

Published in final edited form as: Dev Cell. 2014 Dec 22; 31(6): 761–773. doi: 10.1016/j.devcel.2014.11.021

PMCID:: PMC4275658

Abstract Article PDF–1.6M

Select item 427152718.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 419771019.

Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library

Nick Lowe, Johanna S. Rees, John Roote, Ed Ryder, Irina M. Armean, Glynnis Johnson, Emma Drummond, Helen Spriggs, Jenny Drummond, Jose P. Magbanua, Huw Naylor, Bénédicte Sanson, Rebecca Bastock, Sven Huelsmann, Vitor Trovisco, Matthias Landgraf, Seymour Knowles-Barley, J. Douglas Armstrong, Helen White-Cooper, Celia Hansen, Roger G. Phillips, The UK Drosophila Protein Trap Screening Consortium, Kathryn S. Lilley, Steven Russell, Daniel St Johnston

Development. 2014 Oct; 141(20): 3994–4005. doi: 10.1242/dev.111054

PMCID:: PMC4197710

Abstract Article

Select item 384078920.

Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster

Joshua G Dunn, Catherine K Foo, Nicolette G Belletier, Elizabeth R Gavis, Jonathan S Weissman

eLife. 2013; 2: e01179. Published online 2013 Dec 3. doi: 10.7554/eLife.01179

Correction in:: eLife. 2014; 3: e03178.

PMCID:: PMC3840789

Abstract Article PDF–4.2M

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