PMC Links for GEO Profiles (Select 45272549) - PMC

Select item 103547171.

Deletion of taf1 and taf5 in zebrafish capitulate cardiac and craniofacial abnormalities associated with TAFopathies through perturbations in metabolism

Jamison Leid, Ryan Gray, Peter Rakita, Andrew L. Koenig, Rohan Tripathy, James A. J. Fitzpatrick, Charles Kaufman, Lilianna Solnica-Krezel, Kory J. Lavine

Biol Open. 2023 Jul 15; 12(7): bio059905. Published online 2023 Jul 13. doi: 10.1242/bio.059905

PMCID:: PMC10354717

Abstract Article PDF–9.5M

Select item 66568822.

TAF1, associated with intellectual disability in humans, is essential for embryogenesis and regulates neurodevelopmental processes in zebrafish

Sanna Gudmundsson, Maria Wilbe, Beata Filipek-Górniok, Anna-Maja Molin, Sara Ekvall, Josefin Johansson, Amin Allalou, Hans Gylje, Vera M. Kalscheuer, Johan Ledin, Göran Annerén, Marie-Louise Bondeson

Sci Rep. 2019; 9: 10730. Published online 2019 Jul 24. doi: 10.1038/s41598-019-46632-8

PMCID:: PMC6656882

Abstract Article PDF–2.0M

Select item 46787943.

TAF1 Variants Are Associated with Dysmorphic Features, Intellectual Disability, and Neurological Manifestations

Jason A. O’Rawe, Yiyang Wu, Max J. Dörfel, Alan F. Rope, P.Y. Billie Au, Jillian S. Parboosingh, Sungjin Moon, Maria Kousi, Konstantina Kosma, Christopher S. Smith, Maria Tzetis, Jane L. Schuette, Robert B. Hufnagel, Carlos E. Prada, Francisco Martinez, Carmen Orellana, Jonathan Crain, Alfonso Caro-Llopis, Silvestre Oltra, Sandra Monfort, Laura T. Jiménez-Barrón, Jeffrey Swensen, Sara Ellingwood, Rosemarie Smith, Han Fang, Sandra Ospina, Sander Stegmann, Nicolette Den Hollander, David Mittelman, Gareth Highnam, Reid Robison, Edward Yang, Laurence Faivre, Agathe Roubertie, Jean-Baptiste Rivière, Kristin G. Monaghan, Kai Wang, Erica E. Davis, Nicholas Katsanis, Vera M. Kalscheuer, Edith H. Wang, Kay Metcalfe, Tjitske Kleefstra, A. Micheil Innes, Sophia Kitsiou-Tzeli, Monica Rosello, Catherine E. Keegan, Gholson J. Lyon

Am J Hum Genet. 2015 Dec 3; 97(6): 922–932. Published online 2015 Dec 3. doi: 10.1016/j.ajhg.2015.11.005

PMCID:: PMC4678794

Abstract Article PDF–1007K

Select item 46341374.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 44410505.

Hypoxia drives transient site-specific copy gain and drug-resistant gene expression

Joshua C. Black, Elnaz Atabakhsh, Jaegil Kim, Kelly M. Biette, Capucine Van Rechem, Brendon Ladd, Paul d. Burrowes, Carlos Donado, Hamid Mattoo, Benjamin P. Kleinstiver, Bing Song, Grasiella Andriani, J. Keith Joung, Othon Iliopoulos, Cristina Montagna, Shiv Pillai, Gad Getz, Johnathan R. Whetstine

Genes Dev. 2015 May 15; 29(10): 1018–1031. doi: 10.1101/gad.259796.115

PMCID:: PMC4441050

Abstract Article PDF–1.6M

Select item 39599526.

A Network of Epigenetic Regulators Guide Developmental Hematopoiesis In Vivo

Hsuan-Ting Huang, Katie L. Kathrein, Abby Barton, Zachary Gitlin, Yue-Hua Huang, Thomas P. Ward, Oliver Hofmann, Anthony Dibiase, Anhua Song, Svitlana Tyekucheva, Winston Hide, Yi Zhou, Leonard I. Zon

Nat Cell Biol. Author manuscript; available in PMC 2014 Jun 1.

Published in final edited form as: Nat Cell Biol. 2013 Dec; 15(12): 1516–1525. Published online 2013 Nov 17. doi: 10.1038/ncb2870

PMCID:: PMC3959952

Abstract Article PDF–1.8M

Select item 31780597.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 28045978.

Quantitative mass spectrometry of TATA binding protein-containing complexes and subunit phosphorylations during the cell cycle

WWM Pim Pijnappel, Annemieke Kolkman, Marijke PA Baltissen, Albert JR Heck, HT Marc Timmers

Proteome Sci. 2009; 7: 46. Published online 2009 Dec 24. doi: 10.1186/1477-5956-7-46

PMCID:: PMC2804597

Abstract Article PDF–829K

Select item 11995469.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305

PMCID:: PMC1199546

Abstract Article PDF–595K

Select item 43029010.

15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis

Jane Lo, Sorcheng Lee, Min Xu, Feng Liu, Hua Ruan, Alvin Eun, Yawen He, Weiping Ma, Weefuen Wang, Zilong Wen, Jinrong Peng

Genome Res. 2003 Mar 1; 13(3): 455–466. doi: 10.1101/gr.885403

PMCID:: PMC430290

Abstract Article PDF–981K

Select item 13924111.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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