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Items: 1 to 20 of 23

1.
Neutral ceramidase regulates breast cancer progression by metabolic programming of TREM2-associated macrophages
Rui Sun, Chao Lei, Zhishan Xu, Xuemei Gu, Liu Huang, Liang Chen, Yi Tan, Min Peng, Kavitha Yaddanapudi, Leah Siskind, Maiying Kong, Robert Mitchell, Jun Yan, Zhongbin Deng
Nat Commun. 2024; 15: 966. Published online 2024 Feb 1. doi: 10.1038/s41467-024-45084-7
PMCID:
PMC10834982
AbstractArticlePDF–9.3M
2.
Identification of genetic drivers of plasma lipoprotein size in the Diversity Outbred mouse population
Tara R. Price, Christopher H. Emfinger, Kathryn L. Schueler, Sarah King, Rebekah Nicholson, Tim Beck, Brian S. Yandell, Scott A. Summers, William L. Holland, Ronald M. Krauss, Mark P. Keller, Alan D. Attie
J Lipid Res. 2023 Dec; 64(12): 100471. Published online 2023 Nov 7. doi: 10.1016/j.jlr.2023.100471
PMCID:
PMC10750189
AbstractArticlePDF–2.3M
3.
Neutral ceramidase-dependent regulation of macrophage metabolism directs intestinal immune homeostasis and controls enteric infection
Rui Sun, Xuemei Gu, Chao Lei, Liang Chen, Shenghui Chu, Guangzhong Xu, Mark A. Doll, Yi Tan, Wenke Feng, Leah Siskind, Craig J. McClain, Zhongbin Deng
Cell Rep. Author manuscript; available in PMC 2022 Apr 13.
Published in final edited form as: Cell Rep. 2022 Mar 29; 38(13): 110560. doi: 10.1016/j.celrep.2022.110560
PMCID:
PMC9007044
AbstractArticlePDF–1.8M
4.
Neutral ceramidase deficiency protects against cisplatin-induced acute kidney injury
Sophia M. Sears, Tess V. Dupre, Parag P. Shah, Deanna L. Davis, Mark A. Doll, Cierra N. Sharp, Alexis A. Vega, Judit Megyesi, Levi J. Beverly, Ashley J. Snider, Lina M. Obeid, Yusuf A. Hannun, Leah J. Siskind
J Lipid Res. 2022 Mar; 63(3): 100179. Published online 2022 Feb 10. doi: 10.1016/j.jlr.2022.100179
PMCID:
PMC8953688
AbstractArticlePDF–2.2M
5.
Asah2 represses the p53-Hmox1 axis to protect myeloid-derived suppressor cells from ferroptosis
Huabin Zhu, John Klement, Chunwan Lu, Priscilla S. Redd, Dafeng Yang, Alyssa D. Smith, Dakota B. Poschel, Juan Zou, Ding Liu, Peng George Wang, David Ostrov, Nicolas Coant, Yusuf A. Hannun, Aaron H. Colby, Mark W. Grinstaff, Kebin Liu
J Immunol. Author manuscript; available in PMC 2022 Mar 15.
Published in final edited form as: J Immunol. 2021 Mar 15; 206(6): 1395–1404. Published online 2021 Feb 5. doi: 10.4049/jimmunol.2000500
PMCID:
PMC7946776
AbstractArticlePDF–1.7M
6.
Loss of neutral ceramidase protects cells from nutrient- and energy -deprivation-induced cell death
Kumaran Sundaram, Andrew R. Mather, Subathra Marimuthu, Parag P. Shah, Ashley J. Snider, Lina M. Obeid, Yusuf A. Hannun, Levi J. Beverly, Leah J. Siskind
Biochem J. Author manuscript; available in PMC 2017 Jul 17.
Published in final edited form as: Biochem J. 2016 Mar 15; 473(6): 743–755. Published online 2016 Jan 8. doi: 10.1042/BJ20150586
PMCID:
PMC5513154
AbstractArticlePDF–4.3M
7.
Mitochondrial protein interactome elucidated by chemical cross-linking mass spectrometry
Devin K. Schweppe, Juan D. Chavez, Chi Fung Lee, Arianne Caudal, Shane E. Kruse, Rudy Stuppard, David J. Marcinek, Gerald S. Shadel, Rong Tian, James E. Bruce
Proc Natl Acad Sci U S A. 2017 Feb 14; 114(7): 1732–1737. Published online 2017 Jan 27. doi: 10.1073/pnas.1617220114
PMCID:
PMC5321032
AbstractArticlePDF–1.1M
8.
Role of neutral ceramidase in colon cancer
Mónica García-Barros, Nicolas Coant, Toshihiko Kawamori, Masayuki Wada, Ashley J. Snider, Jean-Philip Truman, Bill X. Wu, Hideki Furuya, Christopher J. Clarke, Agnieszka B. Bialkowska, Amr Ghaleb, Vincent W. Yang, Lina M. Obeid, Yusuf A. Hannun
FASEB J. 2016 Dec; 30(12): 4159–4171. Published online 2016 Sep 8. doi: 10.1096/fj.201600611R
PMCID:
PMC5102116
AbstractArticle
9.
Lactosylceramide contributes to mitochondrial dysfunction in diabetes
Sergei A. Novgorodov, Christopher L. Riley, Jin Yu, Jarryd A. Keffler, Christopher J. Clarke, An O. Van Laer, Catalin F. Baicu, Michael R. Zile, Tatyana I. Gudz
J Lipid Res. 2016 Apr; 57(4): 546–562. doi: 10.1194/jlr.M060061
PMCID:
PMC4808764
AbstractArticlePDF–1.7M
10.
Essential Roles of Neutral Ceramidase and Sphingosine in Mitochondrial Dysfunction Due to Traumatic Brain Injury
Sergei A. Novgorodov, Christopher L. Riley, Jin Yu, Keith T. Borg, Yusuf A. Hannun, Richard L. Proia, Mark S. Kindy, Tatyana I. Gudz
J Biol Chem. 2014 May 9; 289(19): 13142–13154. Published online 2014 Mar 21. doi: 10.1074/jbc.M113.530311
PMCID:
PMC4036326
AbstractArticlePDF–1.2M
11.
Loss of neutral ceramidase increases inflammation in a mouse model of inflammatory bowel disease
Ashley J. Snider, Bill X. Wu, Russell W. Jenkins, Jonathan A. Sticca, Toshihiko Kawamori, Yusuf A. Hannun, Lina M. Obeid
Prostaglandins Other Lipid Mediat. Author manuscript; available in PMC 2013 Dec 1.
Published in final edited form as: Prostaglandins Other Lipid Mediat. 2012 Dec; 99(0): 124–130. Published online 2012 Aug 31. doi: 10.1016/j.prostaglandins.2012.08.003
PMCID:
PMC3661865
AbstractArticlePDF–1.4M
12.
Transcription factor Ctip2 controls epidermal lipid metabolism and regulates expression of genes involved in sphingolipid biosynthesis during skin development
Zhixing Wang, Jay S. Kirkwood, Alan W. Taylor, Jan F. Stevens, Mark Leid, Gitali Ganguli-Indra, Arup K. Indra
J Invest Dermatol. Author manuscript; available in PMC 2013 Sep 1.
Published in final edited form as: J Invest Dermatol. 2013 Mar; 133(3): 668–676. Published online 2012 Oct 25. doi: 10.1038/jid.2012.358
PMCID:
PMC3556343
AbstractArticlePDF–608K
13.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
14.
Novel Pathway of Ceramide Production in Mitochondria: THIOESTERASE AND NEUTRAL CERAMIDASE PRODUCE CERAMIDE FROM SPHINGOSINE AND ACYL-CoA
Sergei A. Novgorodov, Bill X. Wu, Tatyana I. Gudz, Jacek Bielawski, Tatiana V. Ovchinnikova, Yusuf A. Hannun, Lina M. Obeid
J Biol Chem. 2011 Jul 15; 286(28): 25352–25362. Published online 2011 May 25. doi: 10.1074/jbc.M110.214866
PMCID:
PMC3137106
AbstractArticlePDF–1.2M
15.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
16.
Downregulation of Neutral Ceramidase by Gemcitabine: Implications for Cell Cycle Regulation
Bill X. Wu, Youssef H. Zeidan, Yusuf A. Hannun
Biochim Biophys Acta. Author manuscript; available in PMC 2010 Aug 1.
Published in final edited form as: Biochim Biophys Acta. 2009 Aug; 1791(8): 730–739. Published online 2009 Apr 2. doi: 10.1016/j.bbalip.2009.03.012
PMCID:
PMC2788435
AbstractArticlePDF–2.2M
17.
A mitochondrial protein compendium elucidates complex I disease biology
David J. Pagliarini, Sarah E. Calvo, Betty Chang, Sunil A. Sheth, Scott B. Vafai, Shao-En Ong, Geoffrey A. Walford, Canny Sugiana, Avihu Boneh, William K. Chen, David E. Hill, Marc Vidal, James G. Evans, David R. Thorburn, Steven A. Carr, Vamsi K. Mootha
Cell. Author manuscript; available in PMC 2009 Nov 18.
Published in final edited form as: Cell. 2008 Jul 11; 134(1): 112–123. doi: 10.1016/j.cell.2008.06.016
PMCID:
PMC2778844
AbstractArticlePDF–1.2M
18.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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