PMC Links for GEO Profiles (Select 44252703) - PMC

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Items: 20

Select item 101633481.

Hemato-vascular specification requires arnt1 and arnt2 genes in zebrafish embryos

Hailey E. Edwards, Mary Jane Elizalde, Jaclyn P. Souder, Daniel A. Gorelick

Development. 2023 May 1; 150(9): dev200500. Published online 2023 Apr 28. doi: 10.1242/dev.200500

PMCID:: PMC10163348

Abstract Article

Select item 88185742.

Accumulation of acetaldehyde in aldh2.1^−/− zebrafish causes increased retinal angiogenesis and impaired glucose metabolism

David Philipp Wohlfart, Bowen Lou, Chiara Simone Middel, Jakob Morgenstern, Thomas Fleming, Carsten Sticht, Ingrid Hausser, Rüdiger Hell, Hans-Peter Hammes, Julia Szendrödi, Peter Paul Nawroth, Jens Kroll

Redox Biol. 2022 Apr; 50: 102249. Published online 2022 Jan 26. doi: 10.1016/j.redox.2022.102249

PMCID:: PMC8818574

Abstract Article PDF–11M

Select item 72370443.

Bidirectional crosstalk between Hypoxia-Inducible Factor and glucocorticoid signalling in zebrafish larvae

Davide Marchi, Kirankumar Santhakumar, Eleanor Markham, Nan Li, Karl-Heinz Storbeck, Nils Krone, Vincent T. Cunliffe, Fredericus J. M. van Eeden

PLoS Genet. 2020 May; 16(5): e1008757. Published online 2020 May 7. doi: 10.1371/journal.pgen.1008757

PMCID:: PMC7237044

Abstract Article PDF–3.8M

Select item 70432304.

CRISPR-Cas9-Mutated Pregnane X Receptor (pxr) Retains Pregnenolone-induced Expression of cyp3a65 in Zebrafish (Danio rerio) Larvae

Matthew C Salanga, Nadja R Brun, Rene D Francolini, John J Stegeman, Jared V Goldstone

Toxicol Sci. 2020 Mar; 174(1): 51–62. Published online 2019 Dec 23. doi: 10.1093/toxsci/kfz246

PMCID:: PMC7043230

Abstract Article PDF–1.3M

Select item 49280905.

Transcriptome comparison reveals a genetic network regulating the lower temperature limit in fish

Peng Hu, Mingli Liu, Yimeng Liu, Jinfeng Wang, Dong Zhang, Hongbo Niu, Shouwen Jiang, Jian Wang, Dongsheng Zhang, Bingshe Han, Qianghua Xu, Liangbiao Chen

Sci Rep. 2016; 6: 28952. Published online 2016 Jun 30. doi: 10.1038/srep28952

PMCID:: PMC4928090

Abstract Article PDF–1.7M

Select item 48707326.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 47476397.

Combination effects of AHR agonists and Wnt/β-catenin modulators in zebrafish embryos: implications for physiological and toxicological AHR functions

Emma Wincent, John J. Stegeman, Maria E. Jönsson

Toxicol Appl Pharmacol. Author manuscript; available in PMC 2016 Apr 15.

Published in final edited form as: Toxicol Appl Pharmacol. 2015 Apr 15; 284(2): 163–179. Published online 2015 Feb 21. doi: 10.1016/j.taap.2015.02.014

Correction in:: volume 288 on page 280

PMCID:: PMC4747639

Abstract Article PDF–2.3M

Select item 44972918.

Sim1a and Arnt2 contribute to hypothalamo-spinal axon guidance by regulating Robo2 activity via a Robo3-dependent mechanism

Jörn Schweitzer, Heiko Löhr, Joshua L. Bonkowsky, Katrin Hübscher, Wolfgang Driever

Development. 2013 Jan 1; 140(1): 93–106. doi: 10.1242/dev.087825

PMCID:: PMC4497291

Abstract Article

Select item 43067219.

Role of Pregnane X Receptor and Aryl Hydrocarbon Receptor in Transcriptional Regulation of pxr, CYP2, and CYP3 Genes in Developing Zebrafish

Akira Kubota, Jared V. Goldstone, Benjamin Lemaire, Matthew Takata, Bruce R. Woodin, John J. Stegeman

Toxicol Sci. 2015 Feb; 143(2): 398–407. Published online 2014 Dec 9. doi: 10.1093/toxsci/kfu240

PMCID:: PMC4306721

Abstract Article PDF–504K

Select item 384654510.

The cytochrome P450 2AA gene cluster in zebrafish (Danio rerio); expression of CYP2AA1 and CYP2AA2 and response to phenobarbital-type inducers

Akira Kubota, Afonso C.D. Bainy, Bruce R. Woodin, Jared V. Goldstone, John J. Stegeman

Toxicol Appl Pharmacol. Author manuscript; available in PMC 2014 Oct 1.

Published in final edited form as: Toxicol Appl Pharmacol. 2013 Oct 1; 272(1): 10.1016/j.taap.2013.05.017. Published online 2013 May 29. doi: 10.1016/j.taap.2013.05.017

PMCID:: PMC3846545

Abstract Article PDF–1.5M

Select item 356866711.

Comparative Analysis of Homology Models of the Ah Receptor Ligand Binding Domain: Verification of Structure-Function Predictions by Site-Directed Mutagenesis of a Non-Functional AHR

Domenico Fraccalvieri, Anatoly A. Soshilov, Sibel I. Karchner, Diana G. Franks, Alessandro Pandini, Laura Bonati, Mark E. Hahn, Michael S. Denison

Biochemistry. Author manuscript; available in PMC 2014 Jan 29.

Published in final edited form as: Biochemistry. 2013 Jan 29; 52(4): 714–725. Published online 2013 Jan 14. doi: 10.1021/bi301457f

PMCID:: PMC3568667

Abstract Article PDF–11M

Select item 328163512.

Nrf2b, Novel Zebrafish Paralog of Oxidant-responsive Transcription Factor NF-E2-related Factor 2 (NRF2)

Alicia R. Timme-Laragy, Sibel I. Karchner, Diana G. Franks, Matthew J. Jenny, Rachel C. Harbeitner, Jared V. Goldstone, Andrew G. McArthur, Mark E. Hahn

J Biol Chem. 2012 Feb 10; 287(7): 4609–4627. Published online 2011 Dec 15. doi: 10.1074/jbc.M111.260125

PMCID:: PMC3281635

Abstract Article PDF–4.7M

Select item 326353213.

Repression of Aryl Hydrocarbon Receptor (AHR) Signaling by AHR Repressor: Role of DNA Binding and Competition for AHR Nuclear Translocator

Brad R. Evans, Sibel I. Karchner, Lenka L. Allan, Richard S. Pollenz, Robert L. Tanguay, Matthew J. Jenny, David H. Sherr, Mark E. Hahn

Mol Pharmacol. Author manuscript; available in PMC 2012 Jan 23.

Published in final edited form as: Mol Pharmacol. 2008 Feb; 73(2): 387–398. Published online 2007 Nov 13. doi: 10.1124/mol.107.040204

PMCID:: PMC3263532

Abstract Article PDF–1.5M

Select item 317805914.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 314085715.

Potential Roles of Arnt2 in Zebrafish Larval Development

Adrian J. Hill, Tisha C. King Heiden, Warren Heideman, Richard E. Peterson

Zebrafish. 2009 Mar; 6(1): 79–91. doi: 10.1089/zeb.2008.0536

PMCID:: PMC3140857

Abstract Article PDF–627K

Select item 296767516.

Essential genes for astroglial development and axon pathfinding during zebrafish embryogenesis

Michael J.F. Barresi, Sean Burton, Kristina DiPietrantonio, Adam Amsterdam, Nancy Hopkins, Rolf O. Karlstrom

Dev Dyn. Author manuscript; available in PMC 2011 Oct 1.

Published in final edited form as: Dev Dyn. 2010 Oct; 239(10): 2603–2618. doi: 10.1002/dvdy.22393

PMCID:: PMC2967675

Abstract Article PDF–1.2M

Select item 286478917.

Induction of cytochrome P450 1 genes and stress response genes in developing zebrafish exposed to ultraviolet radiation

Lars Behrendt, Maria E. Jönsson, Jared V. Goldstone, John J. Stegeman

Aquat Toxicol. Author manuscript; available in PMC 2011 Jun 1.

Published in final edited form as: Aquat Toxicol. 2010 Jun 1; 98(1): 74–82. Published online 2010 Feb 4. doi: 10.1016/j.aquatox.2010.01.008

PMCID:: PMC2864789

Abstract Article PDF–436K

Select item 283819118.

The tryptophan photoproduct 6-formylindolo[3,2-b]carbazole (FICZ) binds multiple AHRs and induces multiple CYP1 genes via AHR2 in zebrafish

Maria E. Jönsson, Diana G. Franks, Bruce R. Woodin, Matthew J. Jenny, Rita A. Garrick, Lars Behrendt, Mark E. Hahn, John J. Stegeman

Chem Biol Interact. Author manuscript; available in PMC 2010 Oct 30.

Published in final edited form as: Chem Biol Interact. 2009 Oct 30; 181(3): 447–454. Published online 2009 Jul 15. doi: 10.1016/j.cbi.2009.07.003

PMCID:: PMC2838191

Abstract Article PDF–964K

Select item 119954619.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305