PMC Links for GEO Profiles (Select 44248114) - PMC

Select item 83831151.

A Toolbox for Efficient Proximity-Dependent Biotinylation in Zebrafish Embryos

Shimon M. Rosenthal, Tvisha Misra, Hala Abdouni, Tess C. Branon, Alice Y. Ting, Ian C. Scott, Anne-Claude Gingras

Mol Cell Proteomics. 2021; 20: 100128. Published online 2021 Jul 29. doi: 10.1016/j.mcpro.2021.100128

PMCID:: PMC8383115

Select item 81847882.

Spatio-temporal mRNA tracking in the early zebrafish embryo

Karoline Holler, Anika Neuschulz, Philipp Drewe-Boß, Janita Mintcheva, Bastiaan Spanjaard, Roberto Arsiè, Uwe Ohler, Markus Landthaler, Jan Philipp Junker

Nat Commun. 2021; 12: 3358. Published online 2021 Jun 7. doi: 10.1038/s41467-021-23834-1

PMCID:: PMC8184788

Abstract Article PDF–2.4M

Select item 73546913.

Transcriptome analysis of the zebrafish atoh7−/− Mutant, lakritz, highlights Atoh7‐dependent genetic networks with potential implications for human eye diseases

Giuseppina Covello, Fernando J. Rossello, Michele Filosi, Felipe Gajardo, Anne‐Laure Duchemin, Beatrice F. Tremonti, Michael Eichenlaub, Jose M. Polo, David Powell, John Ngai, Miguel L. Allende, Enrico Domenici, Mirana Ramialison, Lucia Poggi

FASEB Bioadv. 2020 Jul; 2(7): 434–448. Published online 2020 Jun 27. doi: 10.1096/fba.2020-00030

PMCID:: PMC7354691

Abstract Article PDF–2.6M

Select item 67975904.

Analysis of Single Nucleotide Variants in CRISPR-Cas9 Edited Zebrafish Exomes Shows No Evidence of Off-Target Inflation

Marie R. Mooney, Erica E. Davis, Nicholas Katsanis

Front Genet. 2019; 10: 949. Published online 2019 Oct 11. doi: 10.3389/fgene.2019.00949

PMCID:: PMC6797590

Abstract Article PDF–1.3M

Select item 60650965.

The Human FSGS-Causing ANLN R431C Mutation Induces Dysregulated PI3K/AKT/mTOR/Rac1 Signaling in Podocytes

Gentzon Hall, Brandon M. Lane, Kamal Khan, Igor Pediaditakis, Jianqiu Xiao, Guanghong Wu, Liming Wang, Maria E. Kovalik, Megan Chryst-Stangl, Erica E. Davis, Robert F. Spurney, Rasheed A. Gbadegesin

J Am Soc Nephrol. 2018 Aug; 29(8): 2110–2122. Published online 2018 Jul 12. doi: 10.1681/ASN.2017121338

PMCID:: PMC6065096

Abstract Article

Select item 53674766.

Resolving Heart Regeneration by Replacement Histone Profiling

Joseph Aaron Goldman, Guray Kuzu, Nutishia Lee, Jaclyn Karasik, Matthew Gemberling, Matthew J. Foglia, Ravi Karra, Amy L. Dickson, Fei Sun, Michael Y. Tolstorukov, Kenneth D. Poss

Dev Cell. Author manuscript; available in PMC 2018 Feb 27.

Published in final edited form as: Dev Cell. 2017 Feb 27; 40(4): 392–404.e5. doi: 10.1016/j.devcel.2017.01.013

PMCID:: PMC5367476

Abstract Article PDF–2.5M

Select item 52491427.

The Zebrafish Anillin-eGFP Reporter Marks Late Dividing Retinal Precursors and Stem Cells Entering Neuronal Lineages

Meret Cepero Malo, Anne-Laure Duchemin, Luca Guglielmi, Eva Patzel, Saadettin Sel, Gerd U. Auffarth, Matthias Carl, Lucia Poggi

PLoS One. 2017; 12(1): e0170356. Published online 2017 Jan 20. doi: 10.1371/journal.pone.0170356

PMCID:: PMC5249142

Abstract Article PDF–2.3M

Select item 48707328.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46341379.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 449250210.

In vivo Modeling Implicates APOL1 in Nephropathy: Evidence for Dominant Negative Effects and Epistasis under Anemic Stress

Blair R. Anderson, David N. Howell, Karen Soldano, Melanie E. Garrett, Nicholas Katsanis, Marilyn J. Telen, Erica E. Davis, Allison E. Ashley-Koch

PLoS Genet. 2015 Jul; 11(7): e1005349. Published online 2015 Jul 6. doi: 10.1371/journal.pgen.1005349

Correction in:: PLoS Genet. 2015 Sep; 11(9): e1005459.

PMCID:: PMC4492502

Abstract Article PDF–5.3M

Select item 414798211.

Mutations in the Gene That Encodes the F-Actin Binding Protein Anillin Cause FSGS

Rasheed A. Gbadegesin, Gentzon Hall, Adebowale Adeyemo, Nils Hanke, Irini Tossidou, James Burchette, Guanghong Wu, Alison Homstad, Matthew A. Sparks, Jose Gomez, Ruiji Jiang, Andrea Alonso, Peter Lavin, Peter Conlon, Ron Korstanje, M. Christine Stander, Ghaidan Shamsan, Moumita Barua, Robert Spurney, Pravin C. Singhal, Jeffrey B. Kopp, Hermann Haller, David Howell, Martin R. Pollak, Andrey S. Shaw, Mario Schiffer, Michelle P. Winn

J Am Soc Nephrol. 2014 Sep; 25(9): 1991–2002. Published online 2014 Mar 27. doi: 10.1681/ASN.2013090976

PMCID:: PMC4147982

Abstract Article

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 52895913.

Hematopoietic gene expression profile in zebrafish kidney marrow

Huai-Dong Song, Xiao-Jian Sun, Min Deng, Guo-Wei Zhang, Yi Zhou, Xin-Yan Wu, Yan Sheng, Yi Chen, Zheng Ruan, Chun-Lei Jiang, Hui-Yong Fan, Leonard I. Zon, John P. Kanki, Ting Xi Liu, A. Thomas Look, Zhu Chen

Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16240–16245. Published online 2004 Nov 1. doi: 10.1073/pnas.0407241101

PMCID:: PMC528959

Abstract Article PDF–551K

Select item 43029014.

15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis

Jane Lo, Sorcheng Lee, Min Xu, Feng Liu, Hua Ruan, Alvin Eun, Yawen He, Weiping Ma, Weefuen Wang, Zilong Wen, Jinrong Peng

Genome Res. 2003 Mar 1; 13(3): 455–466. doi: 10.1101/gr.885403

PMCID:: PMC430290

Abstract Article PDF–981K

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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